[Insight-users] Looking for a code for sulcus(sulci) segmentation at human brain.

[Luis Ibanez]

Hi Elad,


1) This may be what you are looking for

     "Gray matter segmentation"
     http://www.na-mic.org/publications/item/view/907

     and you may find this also interesting.
     http://www.slicer.org/slicerWiki/index.php/Modules:GyriContourSegmentation-Documentation-3.5


2)  I presume that you are doing this from MRI images,
     is that right ?

     If so, have you evaluated if there is a need
     for correcting field inhomogeneities in your image ?


3)  There are multiple methods that you could
     use for gray matter segmentation.

      In Slicer you will find implementations of

      * Region Growing

      as well as more sophisticated methods such as

      * EM Segmentation
http://www.slicer.org/slicerWiki/index.php/Modules:EM-Segmenter-Documentation



    Please let us know if you still don't find
    what you were looking for.


          Thanks


               Luis


-----------------------------------------------------------------------------------
On Fri, Mar 12, 2010 at 7:53 AM, אלעד <e.dabool at gmail.com> wrote:
>
> Hi All,
>
> We are looking for a way to perform segmentation of the sulcus part in the
> humain brain in ITK.
> Is there anyone who has such code or know where can we find one?
>
> in addition, we are using the Slicer3D environment and wish to integrate it
> in there so if there is such module in Slicer it will be great!
>
> Thank you for you help!
>
> Regards,
> Elad Dabool.
>
>
> _____________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.html
>
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
>
> Follow this link to subscribe/unsubscribe:
> http://www.itk.org/mailman/listinfo/insight-users
>
>