[Insight-users] Insight-users Digest, Vol 75, Issue 6

Jothy jothybasu at gmail.com
Wed Jul 7 05:42:24 EDT 2010


Hi Ma,

Could you please let me know what pipeline you are using to get the DRR?

Thanks,

Jothy

On Wed, Jul 7, 2010 at 10:32 AM, <insight-users-request at itk.org> wrote:

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> Today's Topics:
>
>   1. Fw: DigitallyReconstructedRadiograph1 Cmakelist (michael ma)
>   2.  DigitallyReconstructedRadiograph1 Cmakelist (michael ma)
>   3.  DigitallyReconstructedRadiograph1 Cmakelist (michael ma)
>   4. ScalarImageToGreyLevelCooccurrenceMatrixGenerator (abdelMed)
>   5. Re: DigitallyReconstructedRadiograph1 Cmakelist (D?enan Zuki?)
>   6. Re: DigitallyReconstructedRadiograph1 Cmakelist (michael ma)
>   7. How to use LevenbergMarquardt optimizer? (Michael Kirches)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Wed, 7 Jul 2010 09:46:51 +0800 (CST)
> From: "michael ma" <michael8446 at 126.com>
> Subject: [Insight-users] Fw: DigitallyReconstructedRadiograph1
>        Cmakelist
> To: insight-users at itk.org
> Message-ID: <6e033027.1db4.129aa9580fb.Coremail.michael8446 at 126.com>
> Content-Type: text/plain; charset="gbk"
>
> Dear all,
>
> I am trying to make DRR using  DigitallyReconstructedRadiograph1.cxx from
> itk\InsightToolkit\Examples\Filtering by ITK and VTK.
> BUT I meet difficulties in writing Cmakelist.
> Does anyone know how to write it?
>
> thank you in advance for any help.
>
> best
> Ma
>
>
>
>
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> ------------------------------
>
> Message: 2
> Date: Wed, 7 Jul 2010 09:40:00 +0800 (CST)
> From: "michael ma" <michael8446 at 126.com>
> Subject: [Insight-users]  DigitallyReconstructedRadiograph1 Cmakelist
> To: insight-users at itk.org
> Message-ID: <7c546c12.1b65.129aa8f3a11.Coremail.michael8446 at 126.com>
> Content-Type: text/plain; charset="gbk"
>
> Dear all,
>
> I am trying to make DRR using  DigitallyReconstructedRadiograph1.cxx from
> itk\InsightToolkit\Examples\Filtering by ITK and VTK.
> BUT I meet difficulties in writing Cmakelist.
> Does anyone know how to write it?
>
> thank you in advance for any help.
>
> best
> Ma
> -------------- next part --------------
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> >
>
> ------------------------------
>
> Message: 3
> Date: Wed, 7 Jul 2010 09:44:37 +0800 (CST)
> From: "michael ma" <michael8446 at 126.com>
> Subject: [Insight-users]  DigitallyReconstructedRadiograph1 Cmakelist
> To: insight-users at itk.org
> Message-ID: <65a9285c.1ce5.129aa9375a4.Coremail.michael8446 at 126.com>
> Content-Type: text/plain; charset="gbk"
>
> Dear all,
>
> I am trying to make DRR using  DigitallyReconstructedRadiograph1.cxx from
> itk\InsightToolkit\Examples\Filtering by ITK and VTK.
> BUT I meet difficulties in writing Cmakelist.
> Does anyone know how to write it?
>
> thank you in advance for any help.
>
> best
> Ma
>
>
> -------------- next part --------------
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> >
>
> ------------------------------
>
> Message: 4
> Date: Wed, 7 Jul 2010 00:24:36 -0700 (PDT)
> From: abdelMed <abdelhedimed at yahoo.fr>
> Subject: [Insight-users]
>        ScalarImageToGreyLevelCooccurrenceMatrixGenerator
> To: insight-users at itk.org
> Message-ID: <29093358.post at talk.nabble.com>
> Content-Type: text/plain; charset=us-ascii
>
>
> dear all,
>
> i have a problem with ScalarImageToGreyLevelCooccurrenceMatrixGenerator ,i
> would like to generate the co-occurence matrix with the different
> directions
> 0 ,45 , 90 , 135 degree but i dont know what  offset can i use. thanks
> --
> View this message in context:
> http://old.nabble.com/ScalarImageToGreyLevelCooccurrenceMatrixGenerator-tp29093358p29093358.html
> Sent from the ITK - Users mailing list archive at Nabble.com.
>
>
>
> ------------------------------
>
> Message: 5
> Date: Wed, 7 Jul 2010 10:40:42 +0200
> From: D?enan Zuki? <dzenanz at gmail.com>
> Subject: Re: [Insight-users] DigitallyReconstructedRadiograph1
>        Cmakelist
> To: michael ma <michael8446 at 126.com>
> Cc: insight-users at itk.org
> Message-ID:
>        <AANLkTinLNOR-yq0rg4WcNDTmMlDkDlmC-FjEhk7nAFzc at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Hi Michael,
>
> I attached my CMakeLists.txt, which is relatively simple - just remove the
> parts you don't need and adjust the rest to your needs.
>
> Regards,
> D?enan
>
> 2010/7/7 michael ma <michael8446 at 126.com>
>
> > Dear all,
> >
> > I am trying to make DRR using  DigitallyReconstructedRadiograph1.cxx from
> > itk\InsightToolkit\Examples\Filtering by ITK and VTK.
> > BUT I meet difficulties in writing Cmakelist.
> > Does anyone know how to write it?
> >
> > thank you in advance for any help.
> >
> > best
> > Ma
> >
> >
> >
> >
> >
> > _____________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Kitware offers ITK Training Courses, for more information visit:
> > http://www.kitware.com/products/protraining.html
> >
> > Please keep messages on-topic and check the ITK FAQ at:
> > http://www.itk.org/Wiki/ITK_FAQ
> >
> > Follow this link to subscribe/unsubscribe:
> > http://www.itk.org/mailman/listinfo/insight-users
> >
> >
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> cmake_minimum_required(VERSION 2.6)
>
> add_subdirectory(qe)
> INCLUDE_DIRECTORIES(qe)
> add_subdirectory(hpmc)
> INCLUDE_DIRECTORIES(hpmc)
>
> PROJECT(Spine CXX)
>
> FIND_PACKAGE(ITK REQUIRED)
> INCLUDE(${ITK_USE_FILE})
>
> FIND_PACKAGE(OpenSceneGraph COMPONENTS OpenThreads osg osgUtil osgGA osgDB
> osgViewer osgVolume)
> include_directories(${OPENSCENEGRAPH_INCLUDE_DIRS})
>
> FIND_PACKAGE( OSGWorks COMPONENTS osgwTools )
> include_directories(${OSGWORKS_INCLUDE_DIR})
>
> FIND_PACKAGE(Qt4)
> SET(QT_USE_QTOPENGL 1)
> SET(QT_USE_QTDESIGNER ON)
> INCLUDE(${QT_USE_FILE})
> INCLUDE_DIRECTORIES(${QT_INCLUDE_DIR})
>
> SET(SAMPLE_SRCS Spine.cxx AdapterWidget.h AdapterWidget.cpp mainWindow.cpp
> MainLogic.cpp slicePainter.cpp marching.h marching.cpp marchingGPU.h
> marchingGPU.cpp itkDatImageIO.cxx itkDatImageIO.h itkDatImageIOFactory.cxx
> itkDatImageIOFactory.h)
> SET(SAMPLE_MOC_HDRS mainWindow.h MainLogic.h slicePainter.h)
> SET(SAMPLE_UIS mainWindow.ui slicePainter.ui)
> SET(SAMPLE_RCS mainWindow.qrc)
>
> QT4_ADD_RESOURCES( SAMPLE_RC_SRCS ${SAMPLE_RCS} )
> QT4_WRAP_UI( SAMPLE_UI_HDRS ${SAMPLE_UIS} )
> QT4_WRAP_CPP( SAMPLE_MOC_SRCS ${SAMPLE_MOC_HDRS} )
>
> ADD_EXECUTABLE(Spine ${SAMPLE_SRCS} ${SAMPLE_MOC_HDRS} ${SAMPLE_MOC_SRCS}
> ${SAMPLE_RC_SRCS} ${SAMPLE_UI_HDRS})
>
> TARGET_LINK_LIBRARIES(Spine ${QT_LIBRARIES})
> TARGET_LINK_LIBRARIES(Spine ${OPENSCENEGRAPH_LIBRARIES})
> TARGET_LINK_LIBRARIES(Spine ${OSGWORKS_LIBRARIES})
> TARGET_LINK_LIBRARIES(Spine ITKCommon ITKIO ITKBasicFilters)
> TARGET_LINK_LIBRARIES(Spine QuadEdge)
> TARGET_LINK_LIBRARIES(Spine hpmc)
>
> ------------------------------
>
> Message: 6
> Date: Wed, 7 Jul 2010 16:57:12 +0800 (CST)
> From: "michael ma" <michael8446 at 126.com>
> Subject: Re: [Insight-users] DigitallyReconstructedRadiograph1
>        Cmakelist
> To: D?enan Zuki? <dzenanz at gmail.com>
> Cc: insight-users at itk.org
> Message-ID: <47bba0e6.90a1.129ac1f7fa8.Coremail.michael8446 at 126.com>
> Content-Type: text/plain; charset="utf-8"
>
> Thank you D?enan!
> I will try this way!
>
> Best,
> Ma
>
> At 2010-07-07 16:40:42?"D?enan Zuki?" <dzenanz at gmail.com> wrote:
> Hi Michael,
>
>
> I attached my CMakeLists.txt, which is relatively simple - just remove the
> parts you don't need and adjust the rest to your needs.
>
>
> Regards,
> D?enan
>
>
> 2010/7/7 michael ma <michael8446 at 126.com>
>
> Dear all,
>
> I am trying to make DRR using  DigitallyReconstructedRadiograph1.cxx from
> itk\InsightToolkit\Examples\Filtering by ITK and VTK.
> BUT I meet difficulties in writing Cmakelist.
> Does anyone know how to write it?
>
> thank you in advance for any help.
>
> best
> Ma
>
>
>
>
>
> _____________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.html
>
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
>
> Follow this link to subscribe/unsubscribe:
> http://www.itk.org/mailman/listinfo/insight-users
>
>
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> ------------------------------
>
> Message: 7
> Date: Wed, 7 Jul 2010 11:32:03 +0200
> From: Michael Kirches <michael.kirches at googlemail.com>
> Subject: [Insight-users] How to use LevenbergMarquardt optimizer?
> To: insight-users at itk.org
> Message-ID:
>        <AANLkTimFJbRsazMuWpqAZgulOZ9DK1O9Ff6NQumri3AF at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Dear list,
>
> in my current project, I have to solve a numeric optimization problem to
> get
> parameters for coordinate transformations. Some paper I read suggests to
> use
> Levenberg-Marquardt optimization algorithm to solve the optimization
> problem.
>
> Generally speaking, I want to transform pixel coordinates from an
> ultrasound
> image into a world coordinate system defined by some tracking system. To do
> so, I need to get eight parameters from a given equation.
>
> My question is, if it is possible to use ITK implementation of
> Levenberg-Marquardt to solve numeric optimization problems.
>
> Best Regards,
> Michael
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> End of Insight-users Digest, Vol 75, Issue 6
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>
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