[Insight-users] can not build--IBSRClassification application

[Luis Ibanez]

Hi Baoyun,

You must:

1) Configure InsightApplications from the TOP,
    not from the IBSRClassification subdirectory

2) Then, cd in to the IBSRClassification subdir
    and type 'make'


   Regards,


      Luis


----------------
Baoyun Li wrote:
> Dear Luis and All:
>  
> I am trying to buid IBSRClassification in the ITK application for 
> gaussian mixture models classification. But I got a lot of buid errors.
>  
> I have one folder called  EM_MRF, inside this folder I copy the 
> IBSRClassification folder and create build folder. I modified camkelist 
> file (See the end of the letter) to find ITK, if I did not change the 
> cmakelist file, I got more errors
>  
> Then in the build folder, I typed:
>  
>  ccmake ../IBSRClassification.
>  
> and give the ITK directore, tyep C and G, and quitc cmake. Then typed 
> make to build the code,  I got a lot of errors. It seems that it can not 
> find most of the header.  I only copy some of them to here.
>  
> Can sombody help me to figure this problem?
>  
>  
> Baoyun
>  
>  
> ***********************error messages
>  
> In file included from 
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/ClassifierValidationInputParser.h:228,
>                  from 
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/GaussianClassifierValidationApp.h:22,
>                  from 
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/GaussianClassifierValidationApp.cxx:20:
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/ClassifierValidationInputParser.txx:21:34: 
> error: RawSliceVolumeReader.h: No such file or directory
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/ClassifierValidationInputParser.txx:22:29: 
> error: RawVolumeReader.h: No such file or directory
> In file included from 
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/GaussianClassifierValidationApp.h:24,
>                  from 
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/GaussianClassifierValidationApp.cxx:20:
> /home/gtao/code/vector_segmentation/EM_MRF/IBSRClassification/Code/ClassifierValidationOutput.h:22:29: 
> error: RawVolumeWriter.h: No such file or directory
>  
> ******************Below is the cmakelist file I modified to find ITK, if 
> I did not change the cmakelist file, I got more errors
>  
> cmake_minimum_required(VERSION 2.4)
>  
>   FIND_PACKAGE(ITK)
>   IF(ITK_FOUND)
>     INCLUDE(${ITK_USE_FILE})
>   ELSE(ITK_FOUND)
>     MESSAGE(FATAL_ERROR
>             "Cannot build InsightApplications without ITK.  Please set 
> ITK_DIR.")
>   ENDIF(ITK_FOUND)
>  
> INCLUDE_DIRECTORIES(
> ${IBSRClassification_SOURCE_DIR}/../Common
> ${IBSRClassification_SOURCE_DIR}
> )
> ADD_EXECUTABLE(GaussianIBSRClassificationApp 
> Code/GaussianClassifierValidationApp.cxx)
> INSTALL_TARGETS(/bin GaussianIBSRClassificationApp)
> TARGET_LINK_LIBRARIES (GaussianIBSRClassificationApp
> ITKBasicFilters
> ITKIO
> )
> 
> ADD_EXECUTABLE(KmeansIBSRClassificationApp 
> Code/KmeansClassifierValidationApp.cxx)
> INSTALL_TARGETS(/bin KmeansIBSRClassificationApp)
> TARGET_LINK_LIBRARIES (KmeansIBSRClassificationApp
> ITKBasicFilters
> ITKIO
> )
> 
> ADD_EXECUTABLE(MRFGaussianIBSRClassificationApp 
> Code/MRFGaussianClassifierValidationApp.cxx)
> INSTALL_TARGETS(/bin MRFGaussianIBSRClassificationApp)
> TARGET_LINK_LIBRARIES (MRFGaussianIBSRClassificationApp
> ITKBasicFilters
> ITKIO
> )
> 
> ADD_EXECUTABLE(MRFKmeansIBSRClassificationApp 
> Code/MRFKmeansClassifierValidationApp.cxx)
> INSTALL_TARGETS(/bin MRFKmeansIBSRClassificationApp)
> TARGET_LINK_LIBRARIES (MRFKmeansIBSRClassificationApp
> ITKBasicFilters
> ITKIO
> )
>