[Insight-users] Insight-users Digest, Vol 55, Issue 4
Gaëtan Lehmann
gaetan.lehmann at jouy.inra.fr
Tue Nov 4 14:17:21 EST 2008
Le 4 nov. 08 à 18:46, David Fuentes a écrit :
>
> What is the primary intention of the scripting language interface?
>
> -OR- Should new algorithms and techniques for filtering,
> segmentation, etc. be written in C++ then wrapped in a scripting
> language?
>
this one is the good one :-)
>
>
> thank you,
> David Fuentes
>
>
>
>
>
>
>
>>
>> Message: 1
>> Date: Mon, 3 Nov 2008 10:26:13 +0100
>> From: "Olivier Tournaire" <olitour at gmail.com>
>> Subject: Re: [Insight-users] ITK and python
>> To: " Ga?tan Lehmann " <gaetan.lehmann at jouy.inra.fr>
>> Cc: Insight User <insight-users at itk.org>
>> Message-ID:
>> <4cbd7b750811030126y831d713ic67394fa1cce8508 at mail.gmail.com>
>> Content-Type: text/plain; charset="iso-8859-1"
>>
>> Thank you Ga?tan for you reply.
>>
>> I tried this morning to build python wrapping for itk, but still
>> without
>> success. Here are the steps I performed :
>>
>> 1) mkdir build_with_python && cd build_with_python
>> 2) ccmake ..
>> 3) Turn USE_WRAP_ITK ON
>> 4) Turn ITK_USE_REVIEW ON
>> 5) make -j3
>>
>> The build stops at 43%, "Generating wrap_vcl_complex.xml"
>> He are are the errors :
>>
>> In file included from /usr/include/wchar.h:831,
>> from /usr/include/c++/4.3/cwchar:52,
>> from /usr/include/c++/4.3/bits/postypes.h:47,
>> from /usr/include/c++/4.3/iosfwd:47,
>> from /usr/include/c++/4.3/ios:44,
>> from /usr/include/c++/4.3/istream:45,
>> from /usr/include/c++/4.3/sstream:44,
>> from /usr/include/c++/4.3/complex:52,
>> from
>> /home/olivier/work/dev/lib/InsightToolkit-3.8.0/Utilities/vxl/vcl/
>> iso/vcl_complex.h:6,
>> from
>> /home/olivier/work/dev/lib/InsightToolkit-3.8.0/Utilities/vxl/vcl/
>> vcl_complex.h:62,
>> from
>> /home/olivier/work/dev/lib/InsightToolkit-3.8.0/build_with_python/
>> Wrapping/WrapITK/Modules/VXLNumerics/wrap_vcl_complex.cxx:1:
>> /usr/include/bits/wchar2.h: In function 'int swprintf(wchar_t*,
>> size_t,
>> const wchar_t*, ...)':
>> /usr/include/bits/wchar2.h:290: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/wchar2.h:291: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/wchar2.h: In function 'int wprintf(const
>> wchar_t*, ...)':
>> /usr/include/bits/wchar2.h:340: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/wchar2.h: In function 'int fwprintf(__FILE*, const
>> wchar_t*, ...)':
>> /usr/include/bits/wchar2.h:347: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> In file included from /usr/include/stdio.h:906,
>> from /usr/include/c++/4.3/cstdio:50,
>> from /usr/include/c++/4.3/bits/char_traits.h:48,
>> from /usr/include/c++/4.3/ios:46,
>> from /usr/include/c++/4.3/istream:45,
>> from /usr/include/c++/4.3/sstream:44,
>> from /usr/include/c++/4.3/complex:52,
>> from
>> /home/olivier/work/dev/lib/InsightToolkit-3.8.0/Utilities/vxl/vcl/
>> iso/vcl_complex.h:6,
>> from
>> /home/olivier/work/dev/lib/InsightToolkit-3.8.0/Utilities/vxl/vcl/
>> vcl_complex.h:62,
>> from
>> /home/olivier/work/dev/lib/InsightToolkit-3.8.0/build_with_python/
>> Wrapping/WrapITK/Modules/VXLNumerics/wrap_vcl_complex.cxx:1:
>> /usr/include/bits/stdio2.h: In function 'int sprintf(char*, const
>> char*,
>> ...)':
>> /usr/include/bits/stdio2.h:35: error: '__builtin_va_arg_pack' was not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int snprintf(char*,
>> size_t, const
>> char*, ...)':
>> /usr/include/bits/stdio2.h:66: error: '__builtin_va_arg_pack' was not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int fprintf(FILE*, const
>> char*,
>> ...)':
>> /usr/include/bits/stdio2.h:99: error: '__builtin_va_arg_pack' was not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int printf(const
>> char*, ...)':
>> /usr/include/bits/stdio2.h:105: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int asprintf(char**, const
>> char*,
>> ...)':
>> /usr/include/bits/stdio2.h:159: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int __asprintf(char**,
>> const char*,
>> ...)':
>> /usr/include/bits/stdio2.h:167: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int dprintf(int, const
>> char*,
>> ...)':
>> /usr/include/bits/stdio2.h:174: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> /usr/include/bits/stdio2.h: In function 'int
>> obstack_printf(obstack*, const
>> char*, ...)':
>> /usr/include/bits/stdio2.h:182: error: '__builtin_va_arg_pack' was
>> not
>> declared in this scope
>> make[2]: *** [Wrapping/WrapITK/Modules/VXLNumerics/
>> wrap_vcl_complex.xml]
>> Erreur 1
>> make[1]: ***
>> [Wrapping/WrapITK/Modules/VXLNumerics/CMakeFiles/
>> _VXLNumericsPython.dir/all]
>> Erreur 2
>> make: *** [all] Erreur 2
>>
>>
>> I am running an ubuntu-8.10 with g++ 4.3.2, gccxml 0.9.0, python
>> 2.5 and
>> cswig 1.3.35. Do you have any idea of the problem ?
>>
>> Best regards,
>>
>> Olivier
>>
>> 2008/11/3 Ga?tan Lehmann <gaetan.lehmann at jouy.inra.fr>
>>
>>>
>>> Le 2 nov. 08 ? 19:41, Olivier Tournaire a ?crit :
>>>
>>> Hi all,
>>>>
>>>> Can someone tells me what is the status of ITK python wrapping ?
>>>> Which compiler(s) and versio(s) of python are supported and so
>>>> on ...
>>>>
>>>
>>>
>>> Hi Olivier,
>>>
>>> You can use ITK from python in 3 ways at this time:
>>> * CSwig: that's the one you see directly in ITK options as ;
>>> * WrapITK stable: it is included in ITK, and is enabled with the
>>> USE_WRAPITK_OPTION ;
>>> * WrapITK unstable: the development version of wrapitk, available
>>> in a
>>> separate repository.
>>> I would recommend to use WrapITK stable, as it is way more
>>> complete than
>>> CSwig, and much tested than WrapITK unstable.
>>>
>>> All those version should work with python 2.4 and 2.5, and gcc 4.x
>>> and msvc
>>> 7.1, on linux, Mac OS X and solaris.
>>> I'm using gcc 4.3 at this time.
>>>
>>> I've been quite busy in the last week, and I didn't had enough
>>> time to
>>> carefully read the mailing list, so when you have a question on
>>> python
>>> wrapping, please put my address in the recipients (and keep also
>>> itk users
>>> ML, for the record). That way I shouldn't miss it.
>>>
>>> Regards,
>>>
>>> Ga?tan
>>>
>>> --
>>> Ga?tan Lehmann
>>> Biologie du D?veloppement et de la Reproduction
>>> INRA de Jouy-en-Josas (France)
>>> tel: +33 1 34 65 29 66 fax: 01 34 65 29 09
>>> http://voxel.jouy.inra.fr http://www.mandriva.org
>>> http://www.itk.org http://www.clavier-dvorak.org
>>>
>>>
--
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66 fax: 01 34 65 29 09
http://voxel.jouy.inra.fr http://www.mandriva.org
http://www.itk.org http://www.clavier-dvorak.org
-------------- next part --------------
A non-text attachment was scrubbed...
Name: PGP.sig
Type: application/pgp-signature
Size: 186 bytes
Desc: This is a digitally signed message part
URL: <http://www.itk.org/pipermail/insight-users/attachments/20081104/b765f5d4/attachment.pgp>
More information about the Insight-users
mailing list