[Insight-users] Java wrapping build error

[cheri]

Hello,
          I am in the process of compiling Java wrappers for ITK, but am
encountering some problems.
The version I am using is 3.6.0 (for both ITK and CableSwig).

I began by running ccmake with settings ,
BUILD_SHARED_LIBS to ON
CMAKE_BACKWARDS_COMPATIBILITY to 2.4
ITK_CSWIG_JAVA  to ON
ITK_USE_REVIEW to ON
USE_WRAP_ITK  to ON

On configuring I got the following error:
 "CMake Error: Attempt to add link target SwigRuntimeJava of type:
MODULE_LIBRARY
 to target DeformableTransformsJava. You can only link to STATIC or SHARED
libraries.
 To allow linking of modules set CMAKE_BACKWARDS_COMPATIBILITY to 2.2 or
lower"

Then I set CMAKE_BACKWARDS_COMPATIBILITY to 2.2 and the configuration
completed successfully.

But when executing make I get the following error,

create swig package IntensityFiltersJava
  init module: itkAdaptiveHistogramEqualizationImageFilter
  init module: itkHistogramMatchingImageFilter
  init module: itkIntensityWindowingImageFilter
  init module: itkInvertIntensityImageFilter
  init module: itkMaskImageFilter
  init module: itkMaskNegatedImageFilter
  init module: itkNormalizeImageFilter
  init module: itkRescaleIntensityImageFilter
  init module: itkShiftScaleImageFilter
  init module: itkSigmoidImageFilter
[ 58%] Building CXX object
Wrapping/WrapITK/Modules/IntensityFilters/CMakeFiles/IntensityFiltersJava.dir/wrap_IntensityFiltersJavaJava.o
[ 58%] Generating wrap_itkAdaptiveHistogramEqualizationImageFilterJava.cxx
[ 58%] Building CXX object
Wrapping/WrapITK/Modules/IntensityFilters/CMakeFiles/IntensityFiltersJava.dir/wrap_itkAdaptiveHistogramEqualizationImageFilterJava.o
[ 58%] Generating wrap_itkHistogramMatchingImageFilterJava.cxx
:1: Warning(401): Nothing known about class
'itk::Statistics::Sample<itk::FixedArray<double,1u > >'. Ignored.
:1: Warning(401): Maybe you forgot to instantiate
'itk::Statistics::Sample<itk::FixedArray<double,1u > >' using %template.
:1: Warning(401): Nothing known about class
'itk::Statistics::Sample<itk::FixedArray<float,1u > >'. Ignored.
:1: Warning(401): Maybe you forgot to instantiate
'itk::Statistics::Sample<itk::FixedArray<float,1u > >' using %template.
[ 58%] Building CXX object
Wrapping/WrapITK/Modules/IntensityFilters/CMakeFiles/IntensityFiltersJava.dir/wrap_itkHistogramMatchingImageFilterJava.o
[ 58%] Generating wrap_itkIntensityWindowingImageFilterJava.cxx
[ 58%] Building CXX object
Wrapping/WrapITK/Modules/IntensityFilters/CMakeFiles/IntensityFiltersJava.dir/wrap_itkIntensityWindowingImageFilterJava.o
[ 58%] Generating wrap_itkInvertIntensityImageFilterJava.cxx
[ 58%] Building CXX object
Wrapping/WrapITK/Modules/IntensityFilters/CMakeFiles/IntensityFiltersJava.dir/wrap_itkInvertIntensityImageFilterJava.o
[ 58%] Generating wrap_itkMaskImageFilterJava.cxx
Unexpected error.
Aborted
make[2]: ***
[Wrapping/WrapITK/Modules/IntensityFilters/wrap_itkMaskImageFilterJava.cxx]
Error 134
make[1]: ***
[Wrapping/WrapITK/Modules/IntensityFilters/CMakeFiles/IntensityFiltersJava.dir/all]
Error 2
make: *** [all] Error 2

I guess I'm missing something very simple, but can't figure out what. Please
help

cheers - cheri

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