[Insight-users] Attribute opening in 3D images

[Richard Beare]

Yes, that's right - the one I wrote only does area/volume attribute
operations, which are the ones I have used most commonly (in fact I
suspect exclusively). It uses the algorithm described by Michael
Wilkinson in PAMI. I think I used some non itk coding styles to allow
direct translation of the algorithm.

On Sat, Dec 20, 2008 at 12:15 AM, Gaëtan Lehmann
<gaetan.lehmann at jouy.inra.fr> wrote:
>
> Le 19 déc. 08 à 12:35, Dan Mueller a écrit :
>
>> Hi David,
>>
>> Richard Beare also contributed some attribute morphology classes
>> (though I'm not sure of the full details/implementation/etc. You'll
>> have to check the paper yourself:
>>
>> http://www.insight-journal.org/browse/publication/203
>>
>
> Err, yes, just forgot to cite this one — I'm using it often though.
> I think it can't handle as much kind of attributes than what can be done
> with component trees, but for the size opening, it gives much efficients
> results.
>
>> Make sure you leave a review!
>>
>> HTH
>>
>> Cheers, Dan
>>
>> 2008/12/19 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>
>>> Le 19 déc. 08 à 11:46, David Pastor a écrit :
>>>
>>>> Dear all,
>>>>
>>>> First, just say hello to everybody (this is my first go on the mailing
>>>> list).
>>>>
>>>> We are using ITK for some image processing based on morphology and I'm
>>>> missing some attribute openings (closings) filters on the API. I'd like
>>>> to
>>>> know if there is some ongoing work on that or there is some code that i
>>>> can
>>>> reuse to build up a solution.
>>>>
>>>> I've seen there is an implementation of a Priority Queue... but maybe it
>>>> would be better to use some other potentially faster implementations
>>>> like
>>>> Max trees or Union Sets algorithms.
>>>>
>>>
>>> Hi,
>>>
>>> I've contributed some code both for the grayscale and the binary case.
>>> The
>>> grayscale version is based on max trees - I've called them component
>>> trees.
>>> Both are usable (and used) now, but the one for the grayscale case still
>>> lacks some doc.
>>> You can get it from the insight journal or from the main repository to
>>> get
>>> the last improvements/fixes.
>>>
>>> Binary case:
>>>
>>> http://www.insight-journal.org/browse/publication/176
>>> http://voxel.jouy.inra.fr/darcs/contrib-itk/binaryAttributeMorphology/
>>>
>>> Grayscale case:
>>>
>>> http://www.insight-journal.org/browse/publication/210
>>> http://voxel.jouy.inra.fr/darcs/contrib-itk/componentTree/
>>>
>>> Any comments or improvements are welcome!
>>>
>>> Regards,
>>>
>>> Gaëtan
>>>
>>>
>>> --
>>> Gaëtan Lehmann
>>> Biologie du Développement et de la Reproduction
>>> INRA de Jouy-en-Josas (France)
>>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>>> http://voxel.jouy.inra.fr  http://www.mandriva.org
>>> http://www.itk.org  http://www.clavier-dvorak.org
>>>
>>>
>>> _______________________________________________
>>> Insight-users mailing list
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>>>
>>>
>
> --
> Gaëtan Lehmann
> Biologie du Développement et de la Reproduction
> INRA de Jouy-en-Josas (France)
> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
> http://voxel.jouy.inra.fr  http://www.mandriva.org
> http://www.itk.org  http://www.clavier-dvorak.org
>
>
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