[Insight-users] vnl lib error

[Luis Ibanez]

Hi Alex,

Yes, please report this bug in the new MANTIS bug tracker.

       http://www.itk.org/Bug/


Thanks


    Luis


--------------------------------
Alexandre GOUAILLARD wrote:
> Hi all,
> 
> The compilation without the coverage option is ok.
> 
> I did an Experimental build which result is accessible on today's dashboard
> under the site name "dogsbody-2".
> 
> But when I add the -fprofile-arcs -ftest-coverage to the CXX, C, and linker
> Debug flags, I have the same problems again.
> 
> The first error come from linking of the "vnl_basic_operation_timings"
> executable.
> 
> I will drop the coverage support, and I do not intend to dig further in this
> problem. I hope someone will have time to adress this. Is there any good
> place where I could fill a bug report?
> 
> Alex hanfei.
> 
> 
> On 8/2/07 10:04 AM, "Alexandre GOUAILLARD" <hanfei at caltech.edu> wrote:
> 
> 
>>Hi all,
>>
>>I removed the coverage options (-fprofile-arcs -ftest-coverage) and it seems
>>to be OK now.
>>
>>I will try to put back the coverage support later to check if that was
>>indeed the cause.
>>
>>Matthias, I will try to reproduce your problem, can you give me more details
>>as how and when it happens?
>>
>>Alex
>>
>>
>>
>>On 8/2/07 7:48 AM, "Matthias Riechmann" <riechmann at ira.uka.de> wrote:
>>
>>
>>>Maybe one of my todays postings is related to this topic. The subject is
>>>"Linker Errors using ScalableAffineTransform". I got ITK compiled but
>>>when I instantiate "ScalableAffineTransform" then I get linker errors
>>>describing the absence of some symbols that are supposed to be part of
>>>this vnl library...
>>>
>>>
>>>Matthias
>>>
>>>
>>>
>>>
>>>Tomáš Kazmar schrieb:
>>>
>>>>Hi Alex,
>>>>
>>>> tried to compile today's ITK on a comparable Debian machine and
>>>>unfortunately got no similar errors - any at all. Sorry I can't help.
>>>>
>>>>My config:
>>>>Debian GNU/Linux 2.6.21.1.070503b x86_32
>>>>gcc 4.1.3 20070629 (prerelease) (Debian 4.1.2-13)
>>>>gmake 3.81
>>>>
>>>>Regards,
>>>>Tomash
>>>>
>>>># I tried to install ITK from CVS on a debian machine and I have strange
>>>># compilation errors.
>>>># # I googled the error message but could not find anything helpfull. I
>>>># tried to switch to static lib, same problem. I tried to skip the #
>>>>vnl_test_all project that was generating the first erros, but the same #
>>>>errors appear afterward.
>>>># # Anyone got any idea?
>>>># # My config:
>>>># Debian GNU/Linux 2.6.18-4-amd64 x86_64
>>>># gcc/g++ 4.1.2 20061115 (Debian 4.1.1-21)
>>>># make: GNU make 3.81 (x86_64-pc-linux-gnu)
>>>># # ITK Config:
>>>># with review,
>>>># Debug,
>>>># shared ON,
>>>># coverage options.
>>>># # Error log from make:
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matrix_fixed_ref>>>
> _
> 
>>>>float.3.3_.cxx_1FD5A050_2D935839'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matrix_uint_.cxx>>>
> _
> 
>>>>1FD5A050_DDFCA457'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matrix_fixed_ref>>>
> _
> 
>>>>double.3.3_.cxx_1FD5A050_DC866386'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_sparse_matrix_vn>>>
> l
> 
>>>>_bignum_.cxx_1FD5A050_0E6E34D4'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matrix_fixed_flo>>>
> a
> 
>>>>t.2.2_.cxx_1FD5A050_606BAC04'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl_inst.so: undefined
>>>>reference # to `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Code_Common_vnl_matrix_fixed_ref_double.4.4_.cxx_1FD5>>>
> A
> 
>>>>050_CBC0F9CF' 
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl_inst.so: undefined
>>>>reference # to `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Code_Common_vnl_matrix_fixed_ref_double.2.2_.cxx_1FD5>>>
> A
> 
>>>>050_C87829A8' 
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matlab_print_int>>>
> _
> 
>>>>.cxx_1FD5A050_DBC0BAA7'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matlab_print_uin>>>
> t
> 
>>>>_.cxx_1FD5A050_391F7554'
>>>>
>>>># /root/QuadEdge/Insight/BUILD/bin/libitkvnl.so: undefined reference to
>>>># `global constructors keyed to #
>>>>
> 
> _root_QuadEdge_Insight_Utilities_vxl_core_vnl_Templates_vnl_matlab_print_lon>>>
> g
> 
>>>>_double_.cxx_1FD5A050_4BE4A926'
>>>>
>>>># collect2: ld returned 1 exit status
>>>># make[2]: *** [bin/itkNumericsHeaderTest] Error 1
>>>># make[1]: *** #
>>>>[Testing/Code/Numerics/CMakeFiles/itkNumericsHeaderTest.dir/all] Error 2
>>>># make: *** [all] Error 2
>>>># # alex
>>>># # _______________________________________________
>>>># Insight-users mailing list
>>>># Insight-users at itk.org
>>>># http://www.itk.org/mailman/listinfo/insight-users
>>>># # # _______________________________________________
>>>>Insight-users mailing list
>>>>Insight-users at itk.org
>>>>http://www.itk.org/mailman/listinfo/insight-users
>>
>>
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> 
> 
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