[Insight-users] Writing RGBPixel images problem, Bug?

[Karthik Krishnan]

Is it something that happens in release and not debug ?

CMAKE_BUILD_TYPE:STRING=Debug

http://www.itk.org/Testing/Sites/salmon/Darwin-g5-g++4.0.1-static-Xcode/20060718-0100-Nightly/Notes.html




Bradley Lowekamp wrote:

> So I built ITK with xcode and no shared libraries. Then ran the tests 
> with the following results:
>
> 95% tests passed, 47 tests failed out of 885
>
> The following tests FAILED:
>         202 - itkCenteredRigid2DTransformTest (Failed)
>         215 - itkEuler2DTransformTest (Failed)
>         318 - itkVectorImageTest (Failed)
>         398 - itkInverseDeformationFieldImageFilterTest (Failed)
>         399 - itkIterativeInverseDeformationFieldImageFilterTest (Failed)
>         400 - itkDeformationFieldSourceTest (Failed)
>         541 - itkConnectedComponentImageFilterTest (Failed)
>         542 - itkConnectedComponentImageFilterTest2 (Failed)
>         543 - itkConnectedComponentImageFilterTest3 (Failed)
>         544 - itkMaskConnectedComponentImageFilterTest (Failed)
>         545 - itkScalarConnectedComponentImageFilterTest (Failed)
>         568 - itkTileImageFilterTest (Failed)
>         569 - itkPushPopTileImageFilterTest (Failed)
>         581 - itkVectorResampleImageFilterTest (Failed)
>         631 - itkFEMRegistrationFilterTest (Failed)
>         732 - itkVoronoiPartitioningImageFilterTest1 (Failed)
>         733 - itkVoronoiPartitioningImageFilterTest2 (Failed)ccmake 
>         754 - itkTransformIOTest (Failed)
>         760 - itkVectorImageReadWriteTest (Failed)
>         761 - itkVectorImageReadWriteTest2 (Failed)
>         764 - itkPolygonGroupSpatialObjectXMLFileTest (SEGFAULT)
>         769 - itkLSMImageIOTest (Failed)
>         771 - itkBMPImageIOTest (Failed)
>         772 - itkBMPImageIOTest2 (Failed)
>         778 - itkTIFFImageIOTest (Failed)
>         779 - itkTIFFImageIOTest1 (Failed)
>         780 - itkTIFFImageIOTest2 (Failed)
>         781 - itkTIFFImageIOTest3 (Failed)
>         782 - itkTIFFImageIOTest4 (Failed)
>         783 - itkTIFFImageIOTest5 (Failed)
>         784 - itkTIFFImageIOTest6 (Failed)
>         785 - itkTIFFImageIOTest7 (Failed)
>         786 - itkTIFFImageIOTest8 (Failed)
>         787 - itkTIFFImageIOTest9 (Failed)
>         788 - itkTIFFImageIOTest10 (Failed)
>         792 - itkImageSeriesWriterTest (Failed)
>         795 - itkPNGImageIOTest1 (Failed)
>         796 - itkPNGImageIOTest2 (Failed)
>         849 - itkNrrdRGBImageReadWriteTest0 (Failed)
>         850 - itkNrrdRGBImageReadWriteTest1 (Failed)
>         851 - itkNrrdRGBImageReadWriteTest2 (Failed)
>         852 - itkNrrdRGBAImageReadWriteTest (Failed)
>         856 - itkNrrdDiffusionTensor3DImageReadWriteTest (Failed)
>         858 - itkNrrdComplexImageReadWriteTest (Failed)
>         860 - itkNrrdVectorImageReadWriteTest (Failed)
>         862 - itkNrrdCovariantVectorImageReadWriteTest (Failed)
>         883 - itkSpatialObjectDuplicatorTest (SEGFAULT)
>
> I think that this rules out that it is a linking problem or gcc 
> versioning. I am going to work to get a nightly build submitted to the 
> dashboard, so this problem is known. 
>
>
> On Jul 17, 2006, at 12:08 PM, Luis Ibanez wrote:
>
>>
>> Hi Bradley,
>>
>> Do you have any other versions of the GCC compiler installed
>> in your machine ?
>>
>> It is very likely that you are building the application with a
>> different compiler that you use for building ITK, and therefore
>> the typeid signatures of the RGBPixel may be different, despite
>> that the typeid.name() is the same.
>>
>>
>> Also, are you building ITK as shared libraries ?
>> if yes, are you sure that you don't have old .so libraries in
>> your LD_LIBRARY_PATH that may be linking against your current
>> application ?
>>
>>
>>
>> Since the error is showing up at run time, it seems to indicate
>> a mistmatch between the configuration used for builgind the
>> ImageIOBase.cxx file, and the one used for building your current
>> application.
>>
>>
>> BTW, Yes, we are missing an XCode nightly submission to the ITK
>> Dashboard. It will be great if you can enable testing in your
>> Xcode build of ITK and contribute a submission to the Dashboard.
>> That will help a lot to identify the source of the problem. The
>> ITK test suite already includes about 10 different IO tests for
>> RGBPixel images.
>>
>>
>>   Please let us know what you find.
>>
>>
>>      Thanks
>>
>>
>>         Luis
>>
>>
>>
>> --------------------------
>> Bradley Lowekamp wrote:
>>
>>> That is what it produced for both compilations when I tried it.
>>> On Jul 14, 2006, at 5:08 PM, Karthik Krishnan wrote:
>>>
>>>> What does  the following piece of code compiled on the ppc darwin 
>>>> with xcode  and with unix makefiles tell you ?
>>>>
>>>> #include "itkRGBPixel.h"
>>>> #include <iostream>
>>>> int main() { std::cout  <<  typeid(itk::RGBPixel<unsigned 
>>>> char>).name() << std::endl; return 1; }
>>>>
>>>> Is it not "N3itk8RGBPixelIhEE" ?
>>>>
>>> ========================================================
>>> Bradley Lowekamp  Management Systems Designers Contractor for
>>> Office of High Performance Computing and Communications
>>> National Library of Medicine blowekamp at mail.nih.gov 
>>> <mailto:blowekamp at mail.nih.gov>
>>> ------------------------------------------------------------------------
>>> _______________________________________________
>>> Insight-users mailing list
>>> Insight-users at itk.org <mailto:Insight-users at itk.org>
>>> http://www.itk.org/mailman/listinfo/insight-users
>>
>>
>
> ========================================================
>
> Bradley Lowekamp  
>
> Management Systems Designers Contractor for
>
> Office of High Performance Computing and Communications
>
> National Library of Medicine 
>
> blowekamp at mail.nih.gov <mailto:blowekamp at mail.nih.gov>
>
>
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