[Insight-users] Reading DICOM using GDCM reader

[Karthik Krishnan]

The USE_GDCM option was removed by Mathieu some time in Feb this year. You may want to update your CVS repository.

Thanks
karthik



SMRITI RAGHUNATHAN wrote:

>Hi,
> I actually have two questions:
>
>1) If I try to read DICOM files using DicomSeriesReadImageWrite2.cxx which uses the GDCM reader, then if I let the commands in the CMakeLists file be
>
>IF(USE_GDCM)
>INCLUDE_DIRECTORIES(${GDCM_INCLUDE_DIR})
>ADD_EXECUTABLE(DicomSeriesReadImageWrite2 DicomSeriesReadImageWrite2.cxx)
>TARGET_LINK_LIBRARIES(DicomSeriesReadImageWrite2 ITKCommon ITKIO)
>ENDIF(USE_GDCM)
>
>then after configuring my file it doesn't create a .dsw or .dsp file for DicomSeriesReadImageWrite2 
>
>However, if I remove the statements IF(USE_GDCM) and ENDIF(USE_GDCM), then the .dsw file is created but now it doesn't compile because it can't find the gdcmHeader.h file
>
>Any ideas as to how I can solve this problem or what i might be doing wrong. I know the IF command in the CMakeLists is necessary but then I get to nowhere
>
>
>
>2)If i use the DICOMImageIO2.h, then I can read the stack of images but I can't seem to write them to a file. It gives me the error
>
>ImageFileWriter<012E6420>: No ImageIO set, or none could be created
>
>I think this may be because I am not giving the correct extension for the output file. But i am not sure what extension to give, I have tried .raw,.png
>
>Thanks
>
>Smriti
>
>
>
>
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