[Insight-users] DicomSeries Reader

a a user_itk at yahoo.com.sg
Tue, 24 Feb 2004 12:44:07 +0800 (CST)


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Hi Luis,
 
i think my last question wasn't clear at all, sorry about that. I meant is there a way to use DicomSeriesReadImageWrite or other classes in ITK to sort the volume from time series ( since MRIConvert is an application .exe file, i cannot include in my code)...Thanks again for the trouble
 
Best Regards
jason

Luis Ibanez <luis.ibanez at kitware.com> wrote:

Hi Jason,

Please look at the following post:

http://www.itk.org/pipermail/insight-users/2003-April/003434.html


Keep in mind that the users-list is indexed by Google.

http://www.google.com/advanced_search?as_sitesearch=www.itk.org&as_epq=insight%2Dusers



Regards,


Luis



------------
a a wrote:

> Hi Luis,
> 
> i'll try MRIConvert, however can you describe how i can sort the volumes 
> of slices from a time series of slices, as i need to include this in my 
> application, Thanks alot
> 
> regards
> jason
> 
> 
> */Luis Ibanez /* wrote:
> 
> 
> Hi Jason,
> 
> If you just need a quick solution to this problem,
> you can simply use MRIConvert.
> 
> http://lcni.uoregon.edu/~jolinda/MRIConvert
> 
> If I remember correctly Jolinda Smith added support
> for selecting time series. With this application
> you can save DICOM series as Analyze and MetaImage
> volumens.
> 
> 
> Regards,
> 
> 
> Luis
> 
> 
> -------------
> s y wrote:
> 
> > Hi all,
> >
> > i tried out the DicomSeriesReadImageWrite.cxx on my dataset, but
> found
> > out that the images were sorted in time series (each series is a
> set of
> > tagged images for the different time frames) instead of volume.
> i''ve
> > looked at the itkDicomSeriesFileNames.cxx and
> itkDicomSeriesFileNames.h
> > and noticed that there are different ways of sorting the series
> (i.e.
> > SortByImagePositionPatient, SortBySliceLoc ation, etc.) but i'm
> not sure
> > how to make the DicomSeriesReadImageWrite application work for my
> > dataset (time series), or what to change or add. Can anyone help?
> > Thanks
> >
> > regards
> > jason
> >
> > *Y! Asia presents Lavalife*
> >
> > - Get clicking with thousands of local singles today!
> >
> 
> 
> 
> _______________________________________________
> Insight-users mailing list
> Insight-users at itk.org
> http://www.itk.org/mailman/listinfo/insight-users
> 
> *Y! Asia presents Lavalife* 
> 
> - Get clicking with thousands of local singles today!
> 



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<DIV>Hi Luis,</DIV>
<DIV>&nbsp;</DIV>
<DIV>i think my last question wasn't clear at all, sorry about that. I meant is there a way to use DicomSeriesReadImageWrite or other classes in ITK to sort the volume from time series ( since MRIConvert is an application .exe file, i cannot include in my code)...Thanks again for the trouble</DIV>
<DIV>&nbsp;</DIV>
<DIV>Best Regards</DIV>
<DIV>jason<BR><BR><B><I>Luis Ibanez &lt;luis.ibanez at kitware.com&gt;</I></B> wrote:</DIV>
<BLOCKQUOTE class=replbq style="BORDER-LEFT: #1010ff 2px solid; MARGIN-LEFT: 5px; PADDING-LEFT: 5px"><BR>Hi Jason,<BR><BR>Please look at the following post:<BR><BR>http://www.itk.org/pipermail/insight-users/2003-April/003434.html<BR><BR><BR>Keep in mind that the users-list is indexed by Google.<BR><BR>http://www.google.com/advanced_search?as_sitesearch=www.itk.org&amp;as_epq=insight%2Dusers<BR><BR><BR><BR>Regards,<BR><BR><BR>Luis<BR><BR><BR><BR>------------<BR>a a wrote:<BR><BR>&gt; Hi Luis,<BR>&gt; <BR>&gt; i'll try MRIConvert, however can you describe how i can sort the volumes <BR>&gt; of slices from a time series of slices, as i need to include this in my <BR>&gt; application, Thanks alot<BR>&gt; <BR>&gt; regards<BR>&gt; jason<BR>&gt; <BR>&gt; <BR>&gt; */Luis Ibanez <LUIS.IBANEZ at KITWARE.COM>/* wrote:<BR>&gt; <BR>&gt; <BR>&gt; Hi Jason,<BR>&gt; <BR>&gt; If you just need a quick solution to this problem,<BR>&gt; you can simply use MRIConvert.<BR>&gt; <BR>&gt;
 http://lcni.uoregon.edu/~jolinda/MRIConvert<BR>&gt; <BR>&gt; If I remember correctly Jolinda Smith added support<BR>&gt; for selecting time series. With this application<BR>&gt; you can save DICOM series as Analyze and MetaImage<BR>&gt; volumens.<BR>&gt; <BR>&gt; <BR>&gt; Regards,<BR>&gt; <BR>&gt; <BR>&gt; Luis<BR>&gt; <BR>&gt; <BR>&gt; -------------<BR>&gt; s y wrote:<BR>&gt; <BR>&gt; &gt; Hi all,<BR>&gt; &gt;<BR>&gt; &gt; i tried out the DicomSeriesReadImageWrite.cxx on my dataset, but<BR>&gt; found<BR>&gt; &gt; out that the images were sorted in time series (each series is a<BR>&gt; set of<BR>&gt; &gt; tagged images for the different time frames) instead of volume.<BR>&gt; i''ve<BR>&gt; &gt; looked at the itkDicomSeriesFileNames.cxx and<BR>&gt; itkDicomSeriesFileNames.h<BR>&gt; &gt; and noticed that there are different ways of sorting the series<BR>&gt; (i.e.<BR>&gt; &gt; SortByImagePositionPatient, SortBySliceLoc ation, etc.) but i'm<BR>&gt; not sure<BR>&gt; &gt; how to make the
 DicomSeriesReadImageWrite application work for my<BR>&gt; &gt; dataset (time series), or what to change or add. Can anyone help?<BR>&gt; &gt; Thanks<BR>&gt; &gt;<BR>&gt; &gt; regards<BR>&gt; &gt; jason<BR>&gt; &gt;<BR>&gt; &gt; *Y! Asia presents Lavalife*<BR>&gt; &gt;<BR>&gt; &gt; - Get clicking with thousands of local singles today!<BR>&gt; &gt;<BR>&gt; <BR>&gt; <BR>&gt; <BR>&gt; _______________________________________________<BR>&gt; Insight-users mailing list<BR>&gt; Insight-users at itk.org<BR>&gt; http://www.itk.org/mailman/listinfo/insight-users<BR>&gt; <BR>&gt; *Y! Asia presents Lavalife* <BR>&gt; <BR>&gt; - Get clicking with thousands of local singles today!<BR>&gt; <BR><BR><BR><BR>_______________________________________________<BR>Insight-users mailing list<BR>Insight-users at itk.org<BR>http://www.itk.org/mailman/listinfo/insight-users</BLOCKQUOTE><p><img src=http://sg.yimg.com/i/sg/icons/16/perhearts.gif> <a 
href="http://sg.rd.yahoo.com/mail/tagline/?http://asia.yahoo.com/lavalife" 
target=_blank><B>Y! Asia presents Lavalife</b></a><br><small>- Get clicking with thousands of local singles today!</small>
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