[Insight-users] about series write

[Luis Ibanez]

Hi Yixun,

Thanks for the clarification.

If you need to transpose the axis of the image, then simply
insert the PermuteAxesImageFilter between the reader and the
writer.

http://www.itk.org/Insight/Doxygen/html/classitk_1_1PermuteAxesImageFilter.html



The pipeline will look like


    SeriesReader---->PermuteAxes----->SeriesWriter




Note that you will have to be *very* careful in order to
make sure that you dont swap left-right in the final image.



Regards


     Luis



-------------------------------------------
Yixun Liu wrote:

> Hi,
> 
> The question is I do not want to save it along the Z direction(slice direction). The original slice is sagittal, but I want to save it axially.
> 
> Thank you!
> 
> ----- Original Message ----- 
> From: "Luis Ibanez" <luis.ibanez at kitware.com>
> To: "Yixun Liu" <yxliu at fudan.edu.cn>
> Cc: <insight-users at itk.org>
> Sent: Sunday, December 19, 2004 11:24 AM
> Subject: Re: [Insight-users] about series write
> 
> 
> 
>>Hi Yixun,
>>
>>Just combine the following two examples from the IO directory
>>
>>
>>      Insight/Examples/IO/
>>
>>         DicomSeriesReadImageWrite.cxx
>>
>>         ImageReadImageSeriesWrite.cxx
>>
>>The first example shows you how to read an image from a set
>>of DICOM files. The second example shows how to save an image
>>as a series of 2D slices, where you can select any image file
>>format, such as PNG, TIFF, JPEG... etc.
>>
>>Note that you must provide the base filename for the
>>output slices as well as the filename extensiong.
>>
>>If you want to get image in TIFF file format, then
>>simply provide "tiff" as the extension.
>>
>>
>>Please let us know if you have further questions,
>>
>>
>>   Thanks
>>
>>
>>       Luis
>>
>>
>>-------------------------
>>Yixun Liu wrote:
>>
>>
>>>Hi,
>>> 
>>>I have a DICOM  sagittal series and I want to write it to a series of 
>>>TIFF file. Each tiff file is a corsscut instead of sagittal. Anybody 
>>>tell me how to do it?
>>> 
>>> 
>>>Thanks,
>>> 
>>>Yixun liu
>>>
>>>
>>>------------------------------------------------------------------------
>>>
>>>_______________________________________________
>>>Insight-users mailing list
>>>Insight-users at itk.org
>>>http://www.itk.org/mailman/listinfo/insight-users
>>
>>
>>
>>
>>
> 
>