[ITK-dev] Build errors using a different C and CXX compiler

Fri Apr 7 14:10:58 EDT 2017

Thanks, Jon!

On Fri, Apr 7, 2017 at 1:49 PM, Lefman, Jonathan
<jonathan.lefman at intel.com> wrote:
> There is a confirmed bug in the latest release of the Intel Compiler. Any code which compiles in gcc should compile under icc. There is a workaround listed in the last comment here: https://software.intel.com/en-us/comment/1902247. I will notify once a fix has been released. I will try to find out if we can include ITK in regular build tests for ICC development.
>
> -Jon
>
> -----Original Message-----
> From: Matt McCormick [mailto:matt.mccormick at kitware.com]
> Sent: Thursday, April 6, 2017 3:40 PM
> To: Lefman, Jonathan <jonathan.lefman at intel.com>
> Cc: insight-developers at itk.org
> Subject: Re: Build errors using a different C and CXX compiler
>
> Excellent, thanks, Jon!
>
> On Thu, Apr 6, 2017 at 3:35 PM, Lefman, Jonathan <jonathan.lefman at intel.com> wrote:
>> Matt,
>>
>> I just met with a technical lead for the Intel compiler front-end group to review this issue. I may have uncovered a bug in the front-end logic. They are investigating to dig into the reason for this anomaly. When I receive their analysis, I will report back what the next steps are.
>>
>> -Jon
>>
>> -----Original Message-----
>> From: Matt McCormick [mailto:matt.mccormick at kitware.com]
>> Sent: Wednesday, April 5, 2017 5:17 PM
>> To: Lefman, Jonathan <jonathan.lefman at intel.com>
>> Cc: insight-developers at itk.org
>> Subject: Re: Build errors using a different C and CXX compiler
>>
>> Hi Jon,
>>
>> It does not look like we have working builds of ICC on the dashboard [1]. As they say, if it not tested, it is broken. There are two x86_64 ICC builds, but they either have a build system issue, or ITK needs to be updated to use this compiler. What version of the compiler is it?
>>
>> Thanks,
>> Matt
>>
>> [1] https://open.cdash.org/index.php?project=Insight
>>
>> On Wed, Apr 5, 2017 at 4:57 PM, Lefman, Jonathan <jonathan.lefman at intel.com> wrote:
>>> Hi all,
>>>
>>>
>>>
>>> I am attempting to build ITK from source (have tried using v4.11.0
>>> and
>>> master) using a different CXX compiler. To start, I do not have an
>>> issue when I utilize the default compiler (gcc) as much compiler.
>>> This works fine; tests are successful.
>>>
>>>
>>>
>>> The error I encounter on both Ubuntu and Centos systems is the same.
>>> It looks like this on the make output:
>>>
>>> [ 58%] Building CXX object
>>> Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.
>>> dir/itkRayCastInterpolateImageFunctionTest.cxx.o
>>>
>>> /src/ITK/Modules/Core/ImageFunction/include/itkRayCastInterpolateImageFunction.hxx(38):
>>> error: member "<unnamed>::RayCastHelper<TInputImage,
>>> TCoordRep>::InputImageDimension [with TInputImage=itk::Image<unsigned
>>> TCoordRep>char,
>>> 3U>, TCoordRep=double]" was referenced but not defined
>>>
>>>     itkStaticConstMacro(InputImageDimension, unsigned int,
>>>
>>>     ^
>>>
>>>
>>>
>>> compilation aborted for
>>> /src/ITK/Modules/Core/ImageFunction/test/itkRayCastInterpolateImageFu
>>> n
>>> ctionTest.cxx
>>> (code 2)
>>>
>>> make[2]: ***
>>> [Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDrive
>>> r .dir/itkRayCastInterpolateImageFunctionTest.cxx.o]
>>> Error 2
>>>
>>> make[1]: ***
>>> [Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDrive
>>> r
>>> .dir/all]
>>> Error 2
>>>
>>> make: *** [all] Error 2
>>>
>>>
>>>
>>> My cmake setup looks like this:
>>>
>>> CC=/intel/bin/icc CXX=/intel/bin/icc cmake
>>> -DCMAKE_CXX_COMPILER:FILEPATH=$CXX -DCMAKE_C_COMPILER:FILEPATH=$CC
>>> -DModule_PerformanceBenchmarking:BOOL=ON ..
>>>
>>>
>>>
>>> Example generated CXX_FLAGS are from:
>>> ./Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriv
>>> e
>>> r.dir/flags.make
>>>
>>> # compile CXX with /intel/bin/icc
>>>
>>> CXX_FLAGS =   -w2 -wd1268 -wd981 -wd383 -wd1418 -wd1419 -wd2259 -wd1572
>>> -wd424 -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch
>>> -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -Wno-deprecated
>>> -Wno-invalid-offsetof -Woverloaded-virtual  -O3 -DNDEBUG -fPIE
>>> -I/src/ITK/Modules/Core/ImageAdaptors/include
>>> -I/src/ITK/build_icc/Modules/ThirdParty/KWIML/src
>>> -I/src/ITK/Modules/ThirdParty/KWIML/src
>>> -I/src/ITK/build_icc/Modules/ThirdParty/KWSys/src
>>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/v3p/netlib
>>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/vcl
>>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/core
>>> -I/src/ITK/build_icc/Modules/ThirdParty/VNL/src/vxl/v3p/netlib
>>> -I/src/ITK/build_icc/Modules/ThirdParty/VNL/src/vxl/vcl
>>> -I/src/ITK/build_icc/Modules/ThirdParty/VNL/src/vxl/core
>>> -I/src/ITK/Modules/ThirdParty/VNLInstantiation/include
>>> -I/src/ITK/build_icc/Modules/Core/Common
>>> -I/src/ITK/Modules/Core/Common/include
>>> -I/src/ITK/build_icc/Modules/ThirdParty/Netlib
>>> -I/src/ITK/Modules/Numerics/Statistics/include
>>> -I/src/ITK/Modules/Filtering/ImageFilterBase/include
>>> -I/src/ITK/Modules/Core/Transform/include
>>> -I/src/ITK/Modules/Core/ImageFunction/include
>>> -I/src/ITK/Modules/ThirdParty/DoubleConversion/src/double-conversion
>>> -I/src/ITK/build_icc/Modules/ThirdParty/DoubleConversion/src/double-c
>>> o
>>> nversion
>>> -I/src/ITK/Modules/IO/BMP/include
>>> -I/src/ITK/build_icc/Modules/ThirdParty/Expat/src/expat
>>> -I/src/ITK/Modules/ThirdParty/Expat/src/expat
>>> -I/src/ITK/build_icc/Modules/ThirdParty/ZLIB/src
>>> -I/src/ITK/Modules/ThirdParty/ZLIB/src
>>> -I/src/ITK/build_icc/Modules/ThirdParty/GDCM
>>> -I/src/ITK/build_icc/Modules/ThirdParty/GDCM/src/gdcm/Source/Common
>>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/MediaStorageAndFil
>>> e
>>> Format
>>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/DataDictionary
>>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/Common
>>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectD
>>> e
>>> finition
>>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/MessageExchangeDef
>>> i
>>> nition
>>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEn
>>> c odingDefinition -I/src/ITK/Modules/IO/GDCM/include
>>> -I/src/ITK/Modules/IO/GIPL/include
>>> -I/src/ITK/build_icc/Modules/IO/ImageBase
>>> -I/src/ITK/Modules/IO/ImageBase/include
>>> -I/src/ITK/Modules/IO/JPEG/include
>>> -I/src/ITK/build_icc/Modules/ThirdParty/MetaIO/src/MetaIO/src
>>> -I/src/ITK/Modules/ThirdParty/MetaIO/src/MetaIO/src
>>> -I/src/ITK/Modules/IO/Meta/include
>>> -I/src/ITK/Modules/IO/NIFTI/include
>>> -I/src/ITK/Modules/IO/NRRD/include -I/src/ITK/Modules/IO/PNG/include
>>> -I/src/ITK/Modules/IO/TIFF/include -I/src/ITK/Modules/IO/VTK/include
>>> -I/src/ITK/Modules/Core/TestKernel/include
>>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo
>>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/core/vnl
>>>
>>>
>>>
>>> Does anyone have a pointer to see where this error comes from? Thank you.
>>>
>>>
>>>
>>> -Jon
>>>
>>>