From hans-johnson at uiowa.edu Mon Apr 6 08:56:25 2015 From: hans-johnson at uiowa.edu (Johnson, Hans J) Date: Mon, 6 Apr 2015 12:56:25 +0000 Subject: [ITK-dev] CMake Regular Expression Failure Message-ID: Brad, I think you may be able to recommend a fix easily. I am getting the following CMake configuration error: ============================================ CMake Error at Utilities/InstallTest/CMakeLists.txt:2 (if): if given arguments: "x/usr/local" "MATCHES" "^x/Users/johnsonhj/Dashboard/src/ITK-clang++11/InstallTest\$" Regular expression "^x/Users/johnsonhj/Dashboard/src/ITK-clang++11/InstallTest$" cannot compile ============================================ I am guessing that the problem is the ?++? in the ?clang++11? in the path. Do you know of a quick remedy to this problem? NOTE: I did verify that the problem does not occur if the path name does not contain ?ITK-clang++11?. Thanks, Hans ======================================================================== Hans J. Johnson, Ph.D., Associate Professor Electrical and Computer Engineering (Primary), Biomedical Engineering, Psychiatry hans-johnson at uiowa.edu (319) 621 7185 (cell) (319) 384 3538 ECE Phone (Primary) (319) 353 8587 Psychiatry Phone (Secondary) 4316 Seamans Center Iowa City, IA 52242 ________________________________ Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged. If you are not the intended recipient, you are hereby notified that any retention, dissemination, distribution, or copying of this communication is strictly prohibited. Please reply to the sender that you have received the message in error, then delete it. Thank you. ________________________________ -------------- next part -------------- An HTML attachment was scrubbed... URL: From brad.king at kitware.com Mon Apr 6 09:06:08 2015 From: brad.king at kitware.com (Brad King) Date: Mon, 06 Apr 2015 09:06:08 -0400 Subject: [ITK-dev] CMake Regular Expression Failure In-Reply-To: References: Message-ID: <552284C0.4020804@kitware.com> On 04/06/2015 08:56 AM, Johnson, Hans J wrote: > I am guessing that the problem is the ?++? in the ?clang++11? in the path. Yes. We should not be assuming that the path is a valid regex. > Do you know of a quick remedy to this problem? Please try this: -if("x${CMAKE_INSTALL_PREFIX}" MATCHES "^x${ITK_BINARY_DIR}/InstallTest$") +if("x${CMAKE_INSTALL_PREFIX}" STREQUAL "x${ITK_BINARY_DIR}/InstallTest") and push the fix to Gerrit for review if it works. Thanks, -Brad From blowekamp at mail.nih.gov Tue Apr 7 08:55:31 2015 From: blowekamp at mail.nih.gov (Bradley Lowekamp) Date: Tue, 7 Apr 2015 08:55:31 -0400 Subject: [ITK-dev] Gerrit Download Links Message-ID: <1E9551CE-5BDF-4D95-AC6F-72BF9760B3DD@mail.nih.gov> Matt, In the new Gerrit interface, on the "Download" pull down menu I am getting the following URLs in the command: git pull ssh://blowekamp at review.source.kitware.com:29418/ITK refs/changes/52/19552/1 The port seems to be wrong. If I remove the port from the URL the command seems to work. Perhaps this was just there for testing purposes and needs to be updated? Thanks, Brad From matt.mccormick at kitware.com Tue Apr 7 15:10:59 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Tue, 7 Apr 2015 15:10:59 -0400 Subject: [ITK-dev] Gerrit Download Links In-Reply-To: <1E9551CE-5BDF-4D95-AC6F-72BF9760B3DD@mail.nih.gov> References: <1E9551CE-5BDF-4D95-AC6F-72BF9760B3DD@mail.nih.gov> Message-ID: Hi Brad, Thanks for the note. Yes, it should be port 22. I'll look into correcting the URL. Thanks, Matt On Tue, Apr 7, 2015 at 8:55 AM, Bradley Lowekamp wrote: > Matt, > > In the new Gerrit interface, on the "Download" pull down menu I am getting the following URLs in the command: > > git pull ssh://blowekamp at review.source.kitware.com:29418/ITK refs/changes/52/19552/1 > > > The port seems to be wrong. If I remove the port from the URL the command seems to work. Perhaps this was just there for testing purposes and needs to be updated? > > Thanks, > Brad > From matt.mccormick at kitware.com Tue Apr 7 15:13:51 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Tue, 7 Apr 2015 15:13:51 -0400 Subject: [ITK-dev] Azure Robot Builds are offline Message-ID: Hi folks, Since our Azure grant has currently ended, the Gerrit Azure robot builds for Linux and Windows have ceased. I will replace these with Kitware Robot builds. Thanks, Matt From matt.mccormick at kitware.com Thu Apr 9 09:40:43 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Thu, 9 Apr 2015 09:40:43 -0400 Subject: [ITK-dev] Opportunities to share, discuss, design, and learn with other ITK community members Message-ID: There are a couple of upcoming opportunities to share, discuss, design, and learn with your fellow ITK community members. Today, 1:00 PM Eastern USA time, there will be a Google+ Hangout where we will be doing code reviews: https://plus.google.com/events/cfn4h91mb26l1coq9hu63kugoi8 On Friday, 11:00 AM Eastern USA time, an ITK development conference, https://plus.google.com/events/cv779d1fdghhko68eef25a9e30c For those that cannot join via Hangout, telephone call-in is also possible. Dial: 585-632-6296 Enter pin: 31423 To get regular invites to these events, join the ITK Bar Camp G+ Community: https://plus.google.com/u/0/communities/111375098792764998322 All are welcome. Hope to talk to you then! From matt.mccormick at kitware.com Wed Apr 15 20:37:14 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Wed, 15 Apr 2015 20:37:14 -0400 Subject: [ITK-dev] Opportunities to share, discuss, design, and learn with other ITK community members Message-ID: There are a couple of upcoming opportunities to share, discuss, design, and learn with your fellow ITK community members. On Thursday (tomorrow), 1:00 PM Eastern USA time, there will be a Google+ Hangout where we will be doing code reviews: https://plus.google.com/u/1/events/chh04itdo3em787ufpcijut268k On Friday, 11:00 AM Eastern USA time, an ITK development conference, https://plus.google.com/u/1/events/cuio9b3tcelhir3so1nhtgjdm9k For those that cannot join via Hangout, telephone call-in is also possible. Dial: 585-632-6296 Enter pin: 31423 To get regular invites to these events, join the ITK Bar Camp G+ Community: https://plus.google.com/u/0/communities/111375098792764998322 All are welcome. Hope to talk to you then! From hobbsk at ohio.edu Mon Apr 20 15:51:44 2015 From: hobbsk at ohio.edu (Kevin H. Hobbs) Date: Mon, 20 Apr 2015 15:51:44 -0400 Subject: [ITK-dev] Expected build change Message-ID: <553558D0.7010909@ohio.edu> The operating system on bubbles and murron has been updated and the build names have been changed to reflect the new OS. -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 173 bytes Desc: OpenPGP digital signature URL: From matt.mccormick at kitware.com Mon Apr 20 17:10:35 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Mon, 20 Apr 2015 17:10:35 -0400 Subject: [ITK-dev] Patches for ITK 4.7.2 Message-ID: Hi folks, It is time for another bugfix release - 4.7.2. Here are the current patches on the release branch since 4.7.1: Arnaud Gelas (1): COMP: fix warning with non default template parameter for OutputImage Bradley Lowekamp (3): BUG: Move LBFGSB callback helper to parent BUG: Update AmoebaOptimizer NumberOfIterations BUG: Use base's NumberOfIterations for stopping condition Jon Haitz Legarreta (1): ENH: Increase code coverage for itkCustomColormapFunction Matthew McCormick (4): BUG: Export ITK_FFTW_INCLUDE_PATH as CMake path. COMP: Fix LevelSetsv4 tests with libc++. BUG: Set ITK_BUILD_SHARED in ITKConfig.cmake on Windows. COMP: Address quoted MSVC variable in GDCM. Are there any other patches that should be added? These should be critical bug fixes, compiler fixes, etc. Thanks, Matt From matt.mccormick at kitware.com Mon Apr 20 17:10:45 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Mon, 20 Apr 2015 17:10:45 -0400 Subject: [ITK-dev] [ITK] Expected build change In-Reply-To: <553558D0.7010909@ohio.edu> References: <553558D0.7010909@ohio.edu> Message-ID: Thanks for the note! On Mon, Apr 20, 2015 at 3:51 PM, Kevin H. Hobbs wrote: > The operating system on bubbles and murron has been updated and the > build names have been changed to reflect the new OS. > > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > _______________________________________________ > Community mailing list > Community at itk.org > http://public.kitware.com/mailman/listinfo/community > From bill.lorensen at gmail.com Mon Apr 20 17:15:24 2015 From: bill.lorensen at gmail.com (Bill Lorensen) Date: Mon, 20 Apr 2015 17:15:24 -0400 Subject: [ITK-dev] [ITK] Patches for ITK 4.7.2 In-Reply-To: References: Message-ID: If my AUTOINIT patch works across platforms, then we should include it. On Mon, Apr 20, 2015 at 5:10 PM, Matt McCormick wrote: > Hi folks, > > > It is time for another bugfix release - 4.7.2. Here are the current > patches on the release branch since 4.7.1: > > Arnaud Gelas (1): > COMP: fix warning with non default template parameter for OutputImage > > Bradley Lowekamp (3): > BUG: Move LBFGSB callback helper to parent > BUG: Update AmoebaOptimizer NumberOfIterations > BUG: Use base's NumberOfIterations for stopping condition > > Jon Haitz Legarreta (1): > ENH: Increase code coverage for itkCustomColormapFunction > > Matthew McCormick (4): > BUG: Export ITK_FFTW_INCLUDE_PATH as CMake path. > COMP: Fix LevelSetsv4 tests with libc++. > BUG: Set ITK_BUILD_SHARED in ITKConfig.cmake on Windows. > COMP: Address quoted MSVC variable in GDCM. > > > Are there any other patches that should be added? These should be > critical bug fixes, compiler fixes, etc. > > > Thanks, > Matt > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > _______________________________________________ > Community mailing list > Community at itk.org > http://public.kitware.com/mailman/listinfo/community -- Unpaid intern in BillsBasement at noware dot com From michkapopoff at gmail.com Mon Apr 20 17:17:02 2015 From: michkapopoff at gmail.com (michkapopoff at gmail.com) Date: Mon, 20 Apr 2015 23:17:02 +0200 Subject: [ITK-dev] [ITK] Patches for ITK 4.7.2 In-Reply-To: References: Message-ID: <3457F25A-6D79-466A-8E30-FE2D6DD6EC77@gmail.com> +1 on this patch. > On 20 Apr 2015, at 23:15, Bill Lorensen wrote: > > If my AUTOINIT patch works across platforms, then we should include it. > > > On Mon, Apr 20, 2015 at 5:10 PM, Matt McCormick > wrote: >> Hi folks, >> >> >> It is time for another bugfix release - 4.7.2. Here are the current >> patches on the release branch since 4.7.1: >> >> Arnaud Gelas (1): >> COMP: fix warning with non default template parameter for OutputImage >> >> Bradley Lowekamp (3): >> BUG: Move LBFGSB callback helper to parent >> BUG: Update AmoebaOptimizer NumberOfIterations >> BUG: Use base's NumberOfIterations for stopping condition >> >> Jon Haitz Legarreta (1): >> ENH: Increase code coverage for itkCustomColormapFunction >> >> Matthew McCormick (4): >> BUG: Export ITK_FFTW_INCLUDE_PATH as CMake path. >> COMP: Fix LevelSetsv4 tests with libc++. >> BUG: Set ITK_BUILD_SHARED in ITKConfig.cmake on Windows. >> COMP: Address quoted MSVC variable in GDCM. >> >> >> Are there any other patches that should be added? These should be >> critical bug fixes, compiler fixes, etc. >> >> >> Thanks, >> Matt >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Kitware offers ITK Training Courses, for more information visit: >> http://kitware.com/products/protraining.php >> >> Please keep messages on-topic and check the ITK FAQ at: >> http://www.itk.org/Wiki/ITK_FAQ >> >> Follow this link to subscribe/unsubscribe: >> http://public.kitware.com/mailman/listinfo/insight-developers >> _______________________________________________ >> Community mailing list >> Community at itk.org >> http://public.kitware.com/mailman/listinfo/community > > > > -- > Unpaid intern in BillsBasement at noware dot com > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > _______________________________________________ > Community mailing list > Community at itk.org > http://public.kitware.com/mailman/listinfo/community From hans-johnson at uiowa.edu Tue Apr 21 11:11:31 2015 From: hans-johnson at uiowa.edu (Johnson, Hans J) Date: Tue, 21 Apr 2015 15:11:31 +0000 Subject: [ITK-dev] ITK bugs with recent patch Message-ID: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Matt and Bill, I think a new bug has been introduced for ITK. CMake Error at /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 (message): Requested modules not available: vtkRenderingFreeTypeOpenGL Call Stack (most recent call first): Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) -- Configuring incomplete, errors occurred! See also "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". See also "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 make: *** [all] Error 2 Hans ======================================================================== Hans J. Johnson, Ph.D., Associate Professor Electrical and Computer Engineering (Primary), Biomedical Engineering, Psychiatry hans-johnson at uiowa.edu (319) 621 7185 (cell) (319) 384 3538 ECE Phone (Primary) (319) 353 8587 Psychiatry Phone (Secondary) 4316 Seamans Center Iowa City, IA 52242 ________________________________ Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged. If you are not the intended recipient, you are hereby notified that any retention, dissemination, distribution, or copying of this communication is strictly prohibited. Please reply to the sender that you have received the message in error, then delete it. Thank you. ________________________________ -------------- next part -------------- An HTML attachment was scrubbed... URL: From matt at mmmccormick.com Tue Apr 21 11:14:47 2015 From: matt at mmmccormick.com (Matthew McCormick (thewtex)) Date: Tue, 21 Apr 2015 11:14:47 -0400 Subject: [ITK-dev] ITK bugs with recent patch In-Reply-To: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: Hi Hans, Is this on a Linux build? Thanks, Matt On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J wrote: > Matt and Bill, > > I think a new bug has been introduced for ITK. > > > > CMake Error at > /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 (message): > Requested modules not available: > > vtkRenderingFreeTypeOpenGL > Call Stack (most recent call first): > Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) > > > -- Configuring incomplete, errors occurred! > See also > "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". > See also > "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". > make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 > make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 > make: *** [all] Error 2 > > Hans > > > ======================================================================== > Hans J. Johnson, Ph.D., Associate Professor > Electrical and Computer Engineering (Primary), Biomedical > Engineering, Psychiatry > hans-johnson at uiowa.edu > (319) 621 7185 (cell) > (319) 384 3538 ECE Phone (Primary) > (319) 353 8587 Psychiatry Phone (Secondary) > > 4316 Seamans Center > Iowa City, IA 52242 > > > > ------------------------------ > Notice: This UI Health Care e-mail (including attachments) is covered by > the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is > confidential and may be legally privileged. If you are not the intended > recipient, you are hereby notified that any retention, dissemination, > distribution, or copying of this communication is strictly prohibited. > Please reply to the sender that you have received the message in error, > then delete it. Thank you. > ------------------------------ > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bill.lorensen at gmail.com Tue Apr 21 11:15:03 2015 From: bill.lorensen at gmail.com (Bill Lorensen) Date: Tue, 21 Apr 2015 11:15:03 -0400 Subject: [ITK-dev] ITK bugs with recent patch In-Reply-To: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: I see it also on my Mac. I'll investigate. On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J wrote: > Matt and Bill, > > I think a new bug has been introduced for ITK. > > > > CMake Error at > /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 (message): > Requested modules not available: > > vtkRenderingFreeTypeOpenGL > Call Stack (most recent call first): > Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) > > > -- Configuring incomplete, errors occurred! > See also > "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". > See also > "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". > make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 > make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 > make: *** [all] Error 2 > > Hans > > > ======================================================================== > Hans J. Johnson, Ph.D., Associate Professor > Electrical and Computer Engineering (Primary), Biomedical Engineering, > Psychiatry > hans-johnson at uiowa.edu > (319) 621 7185 (cell) > (319) 384 3538 ECE Phone (Primary) > (319) 353 8587 Psychiatry Phone (Secondary) > > 4316 Seamans Center > Iowa City, IA 52242 > > > > ________________________________ > Notice: This UI Health Care e-mail (including attachments) is covered by the > Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential > and may be legally privileged. If you are not the intended recipient, you > are hereby notified that any retention, dissemination, distribution, or > copying of this communication is strictly prohibited. Please reply to the > sender that you have received the message in error, then delete it. Thank > you. > ________________________________ -- Unpaid intern in BillsBasement at noware dot com From hans-johnson at uiowa.edu Tue Apr 21 11:37:10 2015 From: hans-johnson at uiowa.edu (Johnson, Hans J) Date: Tue, 21 Apr 2015 15:37:10 +0000 Subject: [ITK-dev] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: Mac build, but with fairly up-to-date version of VTK. Hans > On Apr 21, 2015, at 10:15 AM, Bill Lorensen wrote: > > I see it also on my Mac. I'll investigate. > > On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J > wrote: >> Matt and Bill, >> >> I think a new bug has been introduced for ITK. >> >> >> >> CMake Error at >> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 (message): >> Requested modules not available: >> >> vtkRenderingFreeTypeOpenGL >> Call Stack (most recent call first): >> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) >> >> >> -- Configuring incomplete, errors occurred! >> See also >> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". >> See also >> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". >> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 >> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 >> make: *** [all] Error 2 >> >> Hans >> >> >> ======================================================================== >> Hans J. Johnson, Ph.D., Associate Professor >> Electrical and Computer Engineering (Primary), Biomedical Engineering, >> Psychiatry >> hans-johnson at uiowa.edu >> (319) 621 7185 (cell) >> (319) 384 3538 ECE Phone (Primary) >> (319) 353 8587 Psychiatry Phone (Secondary) >> >> 4316 Seamans Center >> Iowa City, IA 52242 >> >> >> >> ________________________________ >> Notice: This UI Health Care e-mail (including attachments) is covered by the >> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential >> and may be legally privileged. If you are not the intended recipient, you >> are hereby notified that any retention, dissemination, distribution, or >> copying of this communication is strictly prohibited. Please reply to the >> sender that you have received the message in error, then delete it. Thank >> you. >> ________________________________ > > > > -- > Unpaid intern in BillsBasement at noware dot com ________________________________ Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged. If you are not the intended recipient, you are hereby notified that any retention, dissemination, distribution, or copying of this communication is strictly prohibited. Please reply to the sender that you have received the message in error, then delete it. Thank you. ________________________________ From bill.lorensen at gmail.com Tue Apr 21 11:40:19 2015 From: bill.lorensen at gmail.com (Bill Lorensen) Date: Tue, 21 Apr 2015 11:40:19 -0400 Subject: [ITK-dev] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL is now gone from VTK, the warnings go away (I'm verifying that now). It does mean that using a VTK prior to the removal of that module, users will get the warning. Bill On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J wrote: > Mac build, but with fairly up-to-date version of VTK. > > Hans > >> On Apr 21, 2015, at 10:15 AM, Bill Lorensen wrote: >> >> I see it also on my Mac. I'll investigate. >> >> On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J >> wrote: >>> Matt and Bill, >>> >>> I think a new bug has been introduced for ITK. >>> >>> >>> >>> CMake Error at >>> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 (message): >>> Requested modules not available: >>> >>> vtkRenderingFreeTypeOpenGL >>> Call Stack (most recent call first): >>> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) >>> >>> >>> -- Configuring incomplete, errors occurred! >>> See also >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". >>> See also >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". >>> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 >>> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 >>> make: *** [all] Error 2 >>> >>> Hans >>> >>> >>> ======================================================================== >>> Hans J. Johnson, Ph.D., Associate Professor >>> Electrical and Computer Engineering (Primary), Biomedical Engineering, >>> Psychiatry >>> hans-johnson at uiowa.edu >>> (319) 621 7185 (cell) >>> (319) 384 3538 ECE Phone (Primary) >>> (319) 353 8587 Psychiatry Phone (Secondary) >>> >>> 4316 Seamans Center >>> Iowa City, IA 52242 >>> >>> >>> >>> ________________________________ >>> Notice: This UI Health Care e-mail (including attachments) is covered by the >>> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential >>> and may be legally privileged. If you are not the intended recipient, you >>> are hereby notified that any retention, dissemination, distribution, or >>> copying of this communication is strictly prohibited. Please reply to the >>> sender that you have received the message in error, then delete it. Thank >>> you. >>> ________________________________ >> >> >> >> -- >> Unpaid intern in BillsBasement at noware dot com > > > > ________________________________ > Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged. If you are not the intended recipient, you are hereby notified that any retention, dissemination, distribution, or copying of this communication is strictly prohibited. Please reply to the sender that you have received the message in error, then delete it. Thank you. > ________________________________ -- Unpaid intern in BillsBasement at noware dot com From jchris.fillionr at kitware.com Tue Apr 21 13:23:55 2015 From: jchris.fillionr at kitware.com (Jean-Christophe Fillion-Robin) Date: Tue, 21 Apr 2015 13:23:55 -0400 Subject: [ITK-dev] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: Hi Bill, Hans, Matt, To account for the different VTK backends, you could introduce an option named ITK_VTK_BACKEND that would default to "OpenGL", that way you would specific VTK components using "vtkRendering${ITK_VTK_BACKEND}". To account for the fact recent version of VTK do not provide vtkRenderingFreeType${ITK_VTK_BACKEND} [1], you could add a compile test internally calling "find_package(VTK)" and checking if the target "vtkRenderingFreeType${ITK_VTK_BACKEND}" exists using "if(TARGET vtkRenderingFreeType${ITK_VTK_BACKEND})". Hth Jc [1] https://github.com/Kitware/VTK/commit/4f7460a57 On Tue, Apr 21, 2015 at 11:40 AM, Bill Lorensen wrote: > I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL > is now gone from VTK, the warnings go away (I'm verifying that now). > It does mean that using a VTK prior to the removal of that module, > users will get the warning. > > Bill > > On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J > wrote: > > Mac build, but with fairly up-to-date version of VTK. > > > > Hans > > > >> On Apr 21, 2015, at 10:15 AM, Bill Lorensen > wrote: > >> > >> I see it also on my Mac. I'll investigate. > >> > >> On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J > >> wrote: > >>> Matt and Bill, > >>> > >>> I think a new bug has been introduced for ITK. > >>> > >>> > >>> > >>> CMake Error at > >>> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 > (message): > >>> Requested modules not available: > >>> > >>> vtkRenderingFreeTypeOpenGL > >>> Call Stack (most recent call first): > >>> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) > >>> > >>> > >>> -- Configuring incomplete, errors occurred! > >>> See also > >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". > >>> See also > >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". > >>> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 > >>> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 > >>> make: *** [all] Error 2 > >>> > >>> Hans > >>> > >>> > >>> > ======================================================================== > >>> Hans J. Johnson, Ph.D., Associate Professor > >>> Electrical and Computer Engineering (Primary), Biomedical Engineering, > >>> Psychiatry > >>> hans-johnson at uiowa.edu > >>> (319) 621 7185 (cell) > >>> (319) 384 3538 ECE Phone (Primary) > >>> (319) 353 8587 Psychiatry Phone (Secondary) > >>> > >>> 4316 Seamans Center > >>> Iowa City, IA 52242 > >>> > >>> > >>> > >>> ________________________________ > >>> Notice: This UI Health Care e-mail (including attachments) is covered > by the > >>> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is > confidential > >>> and may be legally privileged. If you are not the intended recipient, > you > >>> are hereby notified that any retention, dissemination, distribution, or > >>> copying of this communication is strictly prohibited. Please reply to > the > >>> sender that you have received the message in error, then delete it. > Thank > >>> you. > >>> ________________________________ > >> > >> > >> > >> -- > >> Unpaid intern in BillsBasement at noware dot com > > > > > > > > ________________________________ > > Notice: This UI Health Care e-mail (including attachments) is covered by > the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is > confidential and may be legally privileged. If you are not the intended > recipient, you are hereby notified that any retention, dissemination, > distribution, or copying of this communication is strictly prohibited. > Please reply to the sender that you have received the message in error, > then delete it. Thank you. > > ________________________________ > > > > -- > Unpaid intern in BillsBasement at noware dot com > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > -- +1 919 869 8849 -------------- next part -------------- An HTML attachment was scrubbed... URL: From bill.lorensen at gmail.com Tue Apr 21 13:54:09 2015 From: bill.lorensen at gmail.com (Bill Lorensen) Date: Tue, 21 Apr 2015 13:54:09 -0400 Subject: [ITK-dev] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: JC, Patches from experts are also welcome on gerrit. Bill On Tue, Apr 21, 2015 at 1:23 PM, Jean-Christophe Fillion-Robin wrote: > Hi Bill, Hans, Matt, > > To account for the different VTK backends, you could introduce an option > named ITK_VTK_BACKEND that would default to "OpenGL", that way you would > specific VTK components using "vtkRendering${ITK_VTK_BACKEND}". > > To account for the fact recent version of VTK do not provide > vtkRenderingFreeType${ITK_VTK_BACKEND} [1], you could add a compile test > internally calling "find_package(VTK)" and checking if the target > "vtkRenderingFreeType${ITK_VTK_BACKEND}" exists using "if(TARGET > vtkRenderingFreeType${ITK_VTK_BACKEND})". > > Hth > Jc > > [1] https://github.com/Kitware/VTK/commit/4f7460a57 > > > On Tue, Apr 21, 2015 at 11:40 AM, Bill Lorensen > wrote: >> >> I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL >> is now gone from VTK, the warnings go away (I'm verifying that now). >> It does mean that using a VTK prior to the removal of that module, >> users will get the warning. >> >> Bill >> >> On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J >> wrote: >> > Mac build, but with fairly up-to-date version of VTK. >> > >> > Hans >> > >> >> On Apr 21, 2015, at 10:15 AM, Bill Lorensen >> >> wrote: >> >> >> >> I see it also on my Mac. I'll investigate. >> >> >> >> On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J >> >> wrote: >> >>> Matt and Bill, >> >>> >> >>> I think a new bug has been introduced for ITK. >> >>> >> >>> >> >>> >> >>> CMake Error at >> >>> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 >> >>> (message): >> >>> Requested modules not available: >> >>> >> >>> vtkRenderingFreeTypeOpenGL >> >>> Call Stack (most recent call first): >> >>> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) >> >>> >> >>> >> >>> -- Configuring incomplete, errors occurred! >> >>> See also >> >>> >> >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". >> >>> See also >> >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". >> >>> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 >> >>> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 >> >>> make: *** [all] Error 2 >> >>> >> >>> Hans >> >>> >> >>> >> >>> >> >>> ======================================================================== >> >>> Hans J. Johnson, Ph.D., Associate Professor >> >>> Electrical and Computer Engineering (Primary), Biomedical Engineering, >> >>> Psychiatry >> >>> hans-johnson at uiowa.edu >> >>> (319) 621 7185 (cell) >> >>> (319) 384 3538 ECE Phone (Primary) >> >>> (319) 353 8587 Psychiatry Phone (Secondary) >> >>> >> >>> 4316 Seamans Center >> >>> Iowa City, IA 52242 >> >>> >> >>> >> >>> >> >>> ________________________________ >> >>> Notice: This UI Health Care e-mail (including attachments) is covered >> >>> by the >> >>> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >> >>> confidential >> >>> and may be legally privileged. If you are not the intended recipient, >> >>> you >> >>> are hereby notified that any retention, dissemination, distribution, >> >>> or >> >>> copying of this communication is strictly prohibited. Please reply to >> >>> the >> >>> sender that you have received the message in error, then delete it. >> >>> Thank >> >>> you. >> >>> ________________________________ >> >> >> >> >> >> >> >> -- >> >> Unpaid intern in BillsBasement at noware dot com >> > >> > >> > >> > ________________________________ >> > Notice: This UI Health Care e-mail (including attachments) is covered by >> > the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >> > confidential and may be legally privileged. If you are not the intended >> > recipient, you are hereby notified that any retention, dissemination, >> > distribution, or copying of this communication is strictly prohibited. >> > Please reply to the sender that you have received the message in error, then >> > delete it. Thank you. >> > ________________________________ >> >> >> >> -- >> Unpaid intern in BillsBasement at noware dot com >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Kitware offers ITK Training Courses, for more information visit: >> http://kitware.com/products/protraining.php >> >> Please keep messages on-topic and check the ITK FAQ at: >> http://www.itk.org/Wiki/ITK_FAQ >> >> Follow this link to subscribe/unsubscribe: >> http://public.kitware.com/mailman/listinfo/insight-developers > > > > > -- > +1 919 869 8849 -- Unpaid intern in BillsBasement at noware dot com From matt.mccormick at kitware.com Tue Apr 21 17:46:10 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Tue, 21 Apr 2015 17:46:10 -0400 Subject: [ITK-dev] [ITK] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: After conversations, here is a new patch: http://review.source.kitware.com/#/c/19667/ I tested locally on Linux. Please test on the Mac. Thanks, Matt On Tue, Apr 21, 2015 at 1:54 PM, Bill Lorensen wrote: > JC, > > Patches from experts are also welcome on gerrit. > > Bill > > > On Tue, Apr 21, 2015 at 1:23 PM, Jean-Christophe Fillion-Robin > wrote: >> Hi Bill, Hans, Matt, >> >> To account for the different VTK backends, you could introduce an option >> named ITK_VTK_BACKEND that would default to "OpenGL", that way you would >> specific VTK components using "vtkRendering${ITK_VTK_BACKEND}". >> >> To account for the fact recent version of VTK do not provide >> vtkRenderingFreeType${ITK_VTK_BACKEND} [1], you could add a compile test >> internally calling "find_package(VTK)" and checking if the target >> "vtkRenderingFreeType${ITK_VTK_BACKEND}" exists using "if(TARGET >> vtkRenderingFreeType${ITK_VTK_BACKEND})". >> >> Hth >> Jc >> >> [1] https://github.com/Kitware/VTK/commit/4f7460a57 >> >> >> On Tue, Apr 21, 2015 at 11:40 AM, Bill Lorensen >> wrote: >>> >>> I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL >>> is now gone from VTK, the warnings go away (I'm verifying that now). >>> It does mean that using a VTK prior to the removal of that module, >>> users will get the warning. >>> >>> Bill >>> >>> On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J >>> wrote: >>> > Mac build, but with fairly up-to-date version of VTK. >>> > >>> > Hans >>> > >>> >> On Apr 21, 2015, at 10:15 AM, Bill Lorensen >>> >> wrote: >>> >> >>> >> I see it also on my Mac. I'll investigate. >>> >> >>> >> On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J >>> >> wrote: >>> >>> Matt and Bill, >>> >>> >>> >>> I think a new bug has been introduced for ITK. >>> >>> >>> >>> >>> >>> >>> >>> CMake Error at >>> >>> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 >>> >>> (message): >>> >>> Requested modules not available: >>> >>> >>> >>> vtkRenderingFreeTypeOpenGL >>> >>> Call Stack (most recent call first): >>> >>> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) >>> >>> >>> >>> >>> >>> -- Configuring incomplete, errors occurred! >>> >>> See also >>> >>> >>> >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". >>> >>> See also >>> >>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". >>> >>> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 >>> >>> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 >>> >>> make: *** [all] Error 2 >>> >>> >>> >>> Hans >>> >>> >>> >>> >>> >>> >>> >>> ======================================================================== >>> >>> Hans J. Johnson, Ph.D., Associate Professor >>> >>> Electrical and Computer Engineering (Primary), Biomedical Engineering, >>> >>> Psychiatry >>> >>> hans-johnson at uiowa.edu >>> >>> (319) 621 7185 (cell) >>> >>> (319) 384 3538 ECE Phone (Primary) >>> >>> (319) 353 8587 Psychiatry Phone (Secondary) >>> >>> >>> >>> 4316 Seamans Center >>> >>> Iowa City, IA 52242 >>> >>> >>> >>> >>> >>> >>> >>> ________________________________ >>> >>> Notice: This UI Health Care e-mail (including attachments) is covered >>> >>> by the >>> >>> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >>> >>> confidential >>> >>> and may be legally privileged. If you are not the intended recipient, >>> >>> you >>> >>> are hereby notified that any retention, dissemination, distribution, >>> >>> or >>> >>> copying of this communication is strictly prohibited. Please reply to >>> >>> the >>> >>> sender that you have received the message in error, then delete it. >>> >>> Thank >>> >>> you. >>> >>> ________________________________ >>> >> >>> >> >>> >> >>> >> -- >>> >> Unpaid intern in BillsBasement at noware dot com >>> > >>> > >>> > >>> > ________________________________ >>> > Notice: This UI Health Care e-mail (including attachments) is covered by >>> > the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >>> > confidential and may be legally privileged. If you are not the intended >>> > recipient, you are hereby notified that any retention, dissemination, >>> > distribution, or copying of this communication is strictly prohibited. >>> > Please reply to the sender that you have received the message in error, then >>> > delete it. Thank you. >>> > ________________________________ >>> >>> >>> >>> -- >>> Unpaid intern in BillsBasement at noware dot com >>> _______________________________________________ >>> Powered by www.kitware.com >>> >>> Visit other Kitware open-source projects at >>> http://www.kitware.com/opensource/opensource.html >>> >>> Kitware offers ITK Training Courses, for more information visit: >>> http://kitware.com/products/protraining.php >>> >>> Please keep messages on-topic and check the ITK FAQ at: >>> http://www.itk.org/Wiki/ITK_FAQ >>> >>> Follow this link to subscribe/unsubscribe: >>> http://public.kitware.com/mailman/listinfo/insight-developers >> >> >> >> >> -- >> +1 919 869 8849 > > > > -- > Unpaid intern in BillsBasement at noware dot com > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > _______________________________________________ > Community mailing list > Community at itk.org > http://public.kitware.com/mailman/listinfo/community From matt.mccormick at kitware.com Wed Apr 22 23:00:12 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Wed, 22 Apr 2015 23:00:12 -0400 Subject: [ITK-dev] Opportunities to share, discuss, design, and learn with other ITK community members Message-ID: There are a couple of upcoming opportunities to share, discuss, design, and learn with your fellow ITK community members. On Thursday (tomorrow), 1:00 PM Eastern USA time, there will be a Google+ Hangout where we will be doing code reviews: https://plus.google.com/u/1/events/c40jlhlsa9t5ckaedu8a1p2a8ug On Friday, 11:00 AM Eastern USA time, an ITK development conference, https://plus.google.com/u/1/events/c6qhtk86u986h2qs3e4gt14r9kc For those that cannot join via Hangout, telephone call-in is also possible. Dial: 585-632-6296 Enter pin: 31423 To get regular invites to these events, join the ITK Bar Camp G+ Community: https://plus.google.com/u/0/communities/111375098792764998322 All are welcome. Hope to talk to you then! From matt.mccormick at kitware.com Wed Apr 22 23:51:07 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Wed, 22 Apr 2015 23:51:07 -0400 Subject: [ITK-dev] New Highly Parallel Build System, the POWER8 Message-ID: Hi folks, With thanks to Chuck Atkins and FSF France, we have a new build on the dashboard [1] for the IBM POWER8 [2] system. This is a PowerPC64 system with 20 cores and 8 threads per core -- a great system where we can test and improve ITK parallel computing performance! To generate a test build on Gerrit, add request build: power8 in a review's comments. There are currently some build warnings and test failures that should be addressed before we will be able to use the system effectively. Any help here is appreciated. Thanks, Matt [1] https://open.cdash.org/index.php?project=Insight&date=2015-04-22&filtercount=1&showfilters=1&field1=site/string&compare1=63&value1=gcc112 [2] https://en.wikipedia.org/wiki/POWER8 From jerome.velut at kitware.com Thu Apr 23 05:46:48 2015 From: jerome.velut at kitware.com (Jerome Velut) Date: Thu, 23 Apr 2015 11:46:48 +0200 Subject: [ITK-dev] ANN: ITK course in Lyon, France Message-ID: Kitware will be holding a developers training course on June 4th 2015 in Lyon, France. This course will cover the features of ITKv4 : - Overview/Architecture - Segmentation - Registration - Using ITK in your applications Please visit our web site for more information and registration details at : http://formations.kitware.fr/browse/97 Note that the course will be taught in English. If you have any questions, please contact us at courses[at]kitware.com or formations[at]kitware.fr. Best regards, -- J?r?me Velut Research and Development Kitware SAS 26 rue Louis Gu?rin 69100 Villeurbanne, France F: +33 (0)4.37.45.04.15 http://www.kitware.fr http://www.kitware.com/company/team/velut.html -------------- next part -------------- An HTML attachment was scrubbed... URL: From blowekamp at mail.nih.gov Thu Apr 23 10:01:11 2015 From: blowekamp at mail.nih.gov (Bradley Lowekamp) Date: Thu, 23 Apr 2015 10:01:11 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: References: Message-ID: Matt, I'd love to explore the build performance of this system. Any chance you could run clean builds of ITK on this system with 20,40,60,80,100,120,140 and 160 processes and record the timings? I am very curious how this unique systems scales with multiple heavy weight processes, as it's design appears to be uniquely suitable to lighter weight multi-threading. Thanks, Brad On Apr 22, 2015, at 11:51 PM, Matt McCormick wrote: > Hi folks, > > With thanks to Chuck Atkins and FSF France, we have a new build on the > dashboard [1] for the IBM POWER8 [2] system. This is a PowerPC64 > system with 20 cores and 8 threads per core -- a great system where we > can test and improve ITK parallel computing performance! > > > To generate a test build on Gerrit, add > > request build: power8 > > in a review's comments. > > > There are currently some build warnings and test failures that should > be addressed before we will be able to use the system effectively. Any > help here is appreciated. > > Thanks, > Matt > > > [1] https://open.cdash.org/index.php?project=Insight&date=2015-04-22&filtercount=1&showfilters=1&field1=site/string&compare1=63&value1=gcc112 > > [2] https://en.wikipedia.org/wiki/POWER8 > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > _______________________________________________ > Community mailing list > Community at itk.org > http://public.kitware.com/mailman/listinfo/community From matt.mccormick at kitware.com Thu Apr 23 16:31:13 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Thu, 23 Apr 2015 16:31:13 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: References: Message-ID: Hi Brad, Yes, it will be interesting to explore the timings. I will see if I can get shell access to run those tests. Thanks, Matt On Thu, Apr 23, 2015 at 10:01 AM, Bradley Lowekamp wrote: > Matt, > > I'd love to explore the build performance of this system. > > Any chance you could run clean builds of ITK on this system with 20,40,60,80,100,120,140 and 160 processes and record the timings? > > I am very curious how this unique systems scales with multiple heavy weight processes, as it's design appears to be uniquely suitable to lighter weight multi-threading. > > Thanks, > Brad > > On Apr 22, 2015, at 11:51 PM, Matt McCormick wrote: > >> Hi folks, >> >> With thanks to Chuck Atkins and FSF France, we have a new build on the >> dashboard [1] for the IBM POWER8 [2] system. This is a PowerPC64 >> system with 20 cores and 8 threads per core -- a great system where we >> can test and improve ITK parallel computing performance! >> >> >> To generate a test build on Gerrit, add >> >> request build: power8 >> >> in a review's comments. >> >> >> There are currently some build warnings and test failures that should >> be addressed before we will be able to use the system effectively. Any >> help here is appreciated. >> >> Thanks, >> Matt >> >> >> [1] https://open.cdash.org/index.php?project=Insight&date=2015-04-22&filtercount=1&showfilters=1&field1=site/string&compare1=63&value1=gcc112 >> >> [2] https://en.wikipedia.org/wiki/POWER8 >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Kitware offers ITK Training Courses, for more information visit: >> http://kitware.com/products/protraining.php >> >> Please keep messages on-topic and check the ITK FAQ at: >> http://www.itk.org/Wiki/ITK_FAQ >> >> Follow this link to subscribe/unsubscribe: >> http://public.kitware.com/mailman/listinfo/insight-developers >> _______________________________________________ >> Community mailing list >> Community at itk.org >> http://public.kitware.com/mailman/listinfo/community > From chuck.atkins at kitware.com Thu Apr 23 18:21:55 2015 From: chuck.atkins at kitware.com (Chuck Atkins) Date: Thu, 23 Apr 2015 18:21:55 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: References: Message-ID: In case anybody's interested, here's the "spread_numa.sh" script I use to evenly distribute across NUMA domains and bind to CPU cores: ----------BEGIN spread_numa.sh---------- #!/bin/bash # Evenly spread a command across numa domains for a given number of CPU cores function spread() { NUM_CORES=$1 shift # Use this wicked awk script to parse the numactl hardware layout and # select an equal number of cores from each NUMA domain, evenly spaced # across each domain SPREAD="$(numactl -H | sed -n 's|.*cpus: \(.*\)|\1|p' | awk -v NC=${NUM_CORES} -v ND=${NUMA_DOMAINS} 'BEGIN{CPD=NC/ND} {S=NF/CPD; for(C=0;C wrote: > (re-sent for the rest of the dev list) > Hi Bradley, > > It's pretty fast. The interesting numbers are for 20, 40, 80, and 160. > That aligns with 1:1, 2:1, 4:1, and 8:1 threads to core ratio. Starting > from the already configured ITKLinuxPOWER8 currently being built, I did a > ninja clean and then "time ninja -jN". Watching the cpu load for 20, 40, > and 80 cores though, I see a fair amount of both process migration and > unbalanced thread distribution, i.e. for -j20 I'll often see 2 cores with 6 > or 8 threads and the rest with only 1 or 2. So in addition to the -jN > settings, I also ran 20, 40, and 80 threads using numactl with fixed > binding to physical CPU cores to evenly distribute the threads across cores > and prevent thread migration. See timings below in seconds: > > ThreadsRealUserSysTotal CPU Time201037.09719866.685429.79620296.481*(Numa > Bind) 20**915.910**16290.589**319.017**16609.606*40713.77226953.663556.960 > 27510.623(Numa Bind) 40641.92422442.685432.37922875.06480588.35740970.439 > 822.94441793.383*(Numa Bind) 80**538.801**35366.297**637.922**36004.219* > 160572.49262542.9011289.86463832.765(Numa Bind) 160549.74261864.666 > 1242.97563107.641 > > > So it seems like core binding gives us an approximate 10% performance > increase for all thread configurations. And while clearly the core-locked > 4:1 gave us the best time, looking at the total CPU time (user+sys) the 1:1 > looks to be the most efficient for actual cycles used. > > It's interesting to watch how the whole system gets used up for most of > the build but everything gets periodically gated on a handful of linker > processes. And of course, it's always cool to see a screen cap of htop > with a whole boat load of cores at 100% > > > - Chuck > > On Thu, Apr 23, 2015 at 10:01 AM, Bradley Lowekamp > wrote: > >> Matt, >> >> I'd love to explore the build performance of this system. >> >> Any chance you could run clean builds of ITK on this system with >> 20,40,60,80,100,120,140 and 160 processes and record the timings? >> >> I am very curious how this unique systems scales with multiple heavy >> weight processes, as it's design appears to be uniquely suitable to lighter >> weight multi-threading. >> >> Thanks, >> Brad >> >> On Apr 22, 2015, at 11:51 PM, Matt McCormick >> wrote: >> >> > Hi folks, >> > >> > With thanks to Chuck Atkins and FSF France, we have a new build on the >> > dashboard [1] for the IBM POWER8 [2] system. This is a PowerPC64 >> > system with 20 cores and 8 threads per core -- a great system where we >> > can test and improve ITK parallel computing performance! >> > >> > >> > To generate a test build on Gerrit, add >> > >> > request build: power8 >> > >> > in a review's comments. >> > >> > >> > There are currently some build warnings and test failures that should >> > be addressed before we will be able to use the system effectively. Any >> > help here is appreciated. >> > >> > Thanks, >> > Matt >> > >> > >> > [1] >> https://open.cdash.org/index.php?project=Insight&date=2015-04-22&filtercount=1&showfilters=1&field1=site/string&compare1=63&value1=gcc112 >> > >> > [2] https://en.wikipedia.org/wiki/POWER8 >> > _______________________________________________ >> > Powered by www.kitware.com >> > >> > Visit other Kitware open-source projects at >> > http://www.kitware.com/opensource/opensource.html >> > >> > Kitware offers ITK Training Courses, for more information visit: >> > http://kitware.com/products/protraining.php >> > >> > Please keep messages on-topic and check the ITK FAQ at: >> > http://www.itk.org/Wiki/ITK_FAQ >> > >> > Follow this link to subscribe/unsubscribe: >> > http://public.kitware.com/mailman/listinfo/insight-developers >> > _______________________________________________ >> > Community mailing list >> > Community at itk.org >> > http://public.kitware.com/mailman/listinfo/community >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From chuck.atkins at kitware.com Fri Apr 24 09:58:54 2015 From: chuck.atkins at kitware.com (Chuck Atkins) Date: Fri, 24 Apr 2015 09:58:54 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: <8AB4F00A-0A13-43C3-9138-7469D68DBD4C@mail.nih.gov> References: <8AB4F00A-0A13-43C3-9138-7469D68DBD4C@mail.nih.gov> Message-ID: > > Thanks for running and posting those performance numbers. It sadly seems > like 1:1 is most frequently the most efficient use of CPU cycles. > Often, yes, but not always. We used this same system for benchmarking a new multi-threaded iso contour algorithm using vtkSMPTools backed by Intel TBB that Will Schroeder is publishing a paper on. We used this system and a 2 x 18-core + HT Intel machine. Interestingly, when measuring parallel efficiency (speedup vs number of cores), the POWER8 measured the same efficiency (actually slightly better) at 2:1 as the Intel machine did at 1:1. > It's interesting to see how this architectures scales with a large number > of processes, while each core is designed for 8 lighter weight threads is > seems. > Even if the threads are "heavy" you can still get good gains from it since it's more about the details of what the threads are doing. The SMT (symmetric multi-threading) hardware basically lets all parts of a core be utilised simultaneously by multiple threads, i.e. 1 thread can be using the FPU while another thread can at the same time be using the ALU. Having a bunch of threads all trying to use the same resource on a core is where SMT breaks down, which is why it's often a detriment in HPC. However, if you're memory bound instead of compute bound, then while some threads are waiting for memory access, other threads who already have thier data in cache can churn away on the compute cycles. It's all a balancing game. I was hoping to run similar performance test on lhcp-rh6 with 80 virtual > cores 4 sockets each with 10 cores + hyper-theading. Unfortunately I need > to use ninja more as my timing results appear to be from cached > compilations and not actually running the compiler. > Is it Ninja going this or ccache? I often find shared builds machines are configured with ccache by default by symlinking it in place of /usr/bin/gcc and /usr/bin/g++. You can likely bypass it by locating the full path to the actual compilers and passing those in to CMake and avoid ccache entirely. Also, I moved my NUMA distribution script into my personal git repo if anybody feels like tinkering with it: https://github.com/chuckatkins/miscelaneous-scripts/blob/master/scripts/spread_numa.sh - Chuck -------------- next part -------------- An HTML attachment was scrubbed... URL: From blowekamp at mail.nih.gov Fri Apr 24 09:34:56 2015 From: blowekamp at mail.nih.gov (Bradley Lowekamp) Date: Fri, 24 Apr 2015 09:34:56 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: References: Message-ID: <8AB4F00A-0A13-43C3-9138-7469D68DBD4C@mail.nih.gov> Hello Chuck, Thanks for running and posting those performance numbers. It sadly seems like 1:1 is most frequently the most efficient use of CPU cycles. It's interesting to see how this architectures scales with a large number of processes, while each core is designed for 8 lighter weight threads is seems. I was hoping to run similar performance test on lhcp-rh6 with 80 virtual cores 4 sockets each with 10 cores + hyper-theading. Unfortunately I need to use ninja more as my timing results appear to be from cached compilations and not actually running the compiler. I hope were are able to improve ITK threading performance with this system. But due to the tweaky-ness of this type of performance and not having direct access to the system to easily run performance analysis, I and a little unclear how to best utilize it. Thanks! Brad On Apr 23, 2015, at 6:21 PM, Chuck Atkins wrote: > In case anybody's interested, here's the "spread_numa.sh" script I use to evenly distribute across NUMA domains and bind to CPU cores: > > ----------BEGIN spread_numa.sh---------- > #!/bin/bash > > # Evenly spread a command across numa domains for a given number of CPU cores > function spread() > { > NUM_CORES=$1 > shift > > # Use this wicked awk script to parse the numactl hardware layout and > # select an equal number of cores from each NUMA domain, evenly spaced > # across each domain > SPREAD="$(numactl -H | sed -n 's|.*cpus: \(.*\)|\1|p' | awk -v NC=${NUM_CORES} -v ND=${NUMA_DOMAINS} 'BEGIN{CPD=NC/ND} {S=NF/CPD; for(C=0;C > echo Executing: numactl --physcpubind=${SPREAD} "$@" > numactl --physcpubind=${SPREAD} "$@" > } > > # Check command arguments > if [ $# -lt 2 ] > then > echo "Usage: $0 [NUM_CORES_TO_USE] [cmd [arg1] ... [argn]]" > exit 1 > fi > > # Determine the total number of CPU cores > MAX_CORES=$(numactl -s | sed -n 's|physcpubind: \(.*\)|\1|p' | wc -w) > > # Determine the total number of NUMA domains > NUMA_DOMAINS=$(numactl -H | sed -n 's|available: \([0-9]*\).*|\1|p') > > # Verify the number of cores is sane > NUM_CORES=$1 > shift > if [ $NUM_CORES -gt $MAX_CORES ] > then > echo "WARNING: $NUM_CORES cores is out of bounds. Setting to $MAX_CORES cores." > NUM_CORES=$MAX_CORES > fi > if [ $((NUM_CORES%NUMA_DOMAINS)) -ne 0 ] > then > TMP=$(( ((NUM_CORES/NUMA_DOMAINS) + 1) * NUMA_DOMAINS )) > echo "WARNING: $NUM_CORES core(s) are not evenly divided across $NUMA_DOMAINS NUMA domains. Setting to $TMP." > NUM_CORES=$TMP > fi > > echo "Using ${NUM_CORES}/${MAX_CORES} cores across ${NUMA_DOMAINS} NUMA domains" > > spread ${NUM_CORES} "$@" > ----------END spread_numa.sh---------- > > > - Chuck > > On Thu, Apr 23, 2015 at 4:57 PM, Chuck Atkins wrote: > (re-sent for the rest of the dev list) > Hi Bradley, > > It's pretty fast. The interesting numbers are for 20, 40, 80, and 160. That aligns with 1:1, 2:1, 4:1, and 8:1 threads to core ratio. Starting from the already configured ITKLinuxPOWER8 currently being built, I did a ninja clean and then "time ninja -jN". Watching the cpu load for 20, 40, and 80 cores though, I see a fair amount of both process migration and unbalanced thread distribution, i.e. for -j20 I'll often see 2 cores with 6 or 8 threads and the rest with only 1 or 2. So in addition to the -jN settings, I also ran 20, 40, and 80 threads using numactl with fixed binding to physical CPU cores to evenly distribute the threads across cores and prevent thread migration. See timings below in seconds: > > Threads Real User Sys Total CPU Time > 20 1037.097 19866.685 429.796 20296.481 > (Numa Bind) 20 915.910 16290.589 319.017 16609.606 > 40 713.772 26953.663 556.960 27510.623 > (Numa Bind) 40 641.924 22442.685 432.379 22875.064 > 80 588.357 40970.439 822.944 41793.383 > (Numa Bind) 80 538.801 35366.297 637.922 36004.219 > 160 572.492 62542.901 1289.864 63832.765 > (Numa Bind) 160 549.742 61864.666 1242.975 63107.641 > > > > So it seems like core binding gives us an approximate 10% performance increase for all thread configurations. And while clearly the core-locked 4:1 gave us the best time, looking at the total CPU time (user+sys) the 1:1 looks to be the most efficient for actual cycles used. > > It's interesting to watch how the whole system gets used up for most of the build but everything gets periodically gated on a handful of linker processes. And of course, it's always cool to see a screen cap of htop with a whole boat load of cores at 100% > > > - Chuck > > On Thu, Apr 23, 2015 at 10:01 AM, Bradley Lowekamp wrote: > Matt, > > I'd love to explore the build performance of this system. > > Any chance you could run clean builds of ITK on this system with 20,40,60,80,100,120,140 and 160 processes and record the timings? > > I am very curious how this unique systems scales with multiple heavy weight processes, as it's design appears to be uniquely suitable to lighter weight multi-threading. > > Thanks, > Brad > > On Apr 22, 2015, at 11:51 PM, Matt McCormick wrote: > > > Hi folks, > > > > With thanks to Chuck Atkins and FSF France, we have a new build on the > > dashboard [1] for the IBM POWER8 [2] system. This is a PowerPC64 > > system with 20 cores and 8 threads per core -- a great system where we > > can test and improve ITK parallel computing performance! > > > > > > To generate a test build on Gerrit, add > > > > request build: power8 > > > > in a review's comments. > > > > > > There are currently some build warnings and test failures that should > > be addressed before we will be able to use the system effectively. Any > > help here is appreciated. > > > > Thanks, > > Matt > > > > > > [1] https://open.cdash.org/index.php?project=Insight&date=2015-04-22&filtercount=1&showfilters=1&field1=site/string&compare1=63&value1=gcc112 > > > > [2] https://en.wikipedia.org/wiki/POWER8 > > _______________________________________________ > > Powered by www.kitware.com > > > > Visit other Kitware open-source projects at > > http://www.kitware.com/opensource/opensource.html > > > > Kitware offers ITK Training Courses, for more information visit: > > http://kitware.com/products/protraining.php > > > > Please keep messages on-topic and check the ITK FAQ at: > > http://www.itk.org/Wiki/ITK_FAQ > > > > Follow this link to subscribe/unsubscribe: > > http://public.kitware.com/mailman/listinfo/insight-developers > > _______________________________________________ > > Community mailing list > > Community at itk.org > > http://public.kitware.com/mailman/listinfo/community > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From will.schroeder at kitware.com Fri Apr 24 11:10:06 2015 From: will.schroeder at kitware.com (Will Schroeder) Date: Fri, 24 Apr 2015 11:10:06 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: <8AB4F00A-0A13-43C3-9138-7469D68DBD4C@mail.nih.gov> References: <8AB4F00A-0A13-43C3-9138-7469D68DBD4C@mail.nih.gov> Message-ID: On Fri, Apr 24, 2015 at 9:34 AM, Bradley Lowekamp wrote: > I hope were are able to improve ITK threading performance with this > system. But due to the tweaky-ness of this type of performance and not > having direct access to the system to easily run performance analysis, I > and a little unclear how to best utilize it. Since I have recently been working on coarse grained parallelism lately, I have been using the vtkSMPTools abstraction that Berk Geveci and his team designed. Under the hood it uses one of Intel TBB, X-Kaapi, raw threads, serial, and soon OpenMP (picked at compile time). It is fantastically easy to use, with built in load balancing (via thread stealing). I have tremendous respect for what Berk's team is doing...fine-grained (e.g., GPU via VTKm), coarse grained (vtkSMPTools), and data parallel (advanced execution architectures and data models in VTK). Berk is PI and involved in several projects with the DOE labs as they move towards exascale computing and really we should be tapping that community more. For example, VTK/ParaView/Catalyst are running nicely on hundreds of thousands of processors in some hero runs. As another example, we designed a threaded contouring algorithm (Flying Edges) that just knocks the pants off of any other isocontouring algorithm I've seen (we've submitted a paper). It uses this vtkSMPTools abstraction and we were able to easily run it on this POWER8 system (and other systems). It was really cool to run the algorithm on a 2048^3 dataset and see all 160 cores pegged :-) W -- William J. Schroeder, PhD Kitware, Inc. 28 Corporate Drive Clifton Park, NY 12065 will.schroeder at kitware.com http://www.kitware.com (518) 881-4902 -------------- next part -------------- An HTML attachment was scrubbed... URL: From will.schroeder at kitware.com Fri Apr 24 11:21:40 2015 From: will.schroeder at kitware.com (Will Schroeder) Date: Fri, 24 Apr 2015 11:21:40 -0400 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: References: <8AB4F00A-0A13-43C3-9138-7469D68DBD4C@mail.nih.gov> Message-ID: If anyone is interested in vtkSMPTools see this brief but most informative document. The system is under active development. http://www.vtk.org/Wiki/images/3/3b/VTK_SMP_Guide.pdf On Fri, Apr 24, 2015 at 11:10 AM, Will Schroeder wrote: > > On Fri, Apr 24, 2015 at 9:34 AM, Bradley Lowekamp > wrote: > >> I hope were are able to improve ITK threading performance with this >> system. But due to the tweaky-ness of this type of performance and not >> having direct access to the system to easily run performance analysis, I >> and a little unclear how to best utilize it. > > > Since I have recently been working on coarse grained parallelism lately, I > have been using the vtkSMPTools abstraction that Berk Geveci and his team > designed. Under the hood it uses one of Intel TBB, X-Kaapi, raw threads, > serial, and soon OpenMP (picked at compile time). It is fantastically easy > to use, with built in load balancing (via thread stealing). I have > tremendous respect for what Berk's team is doing...fine-grained (e.g., GPU > via VTKm), coarse grained (vtkSMPTools), and data parallel (advanced > execution architectures and data models in VTK). Berk is PI and involved in > several projects with the DOE labs as they move towards exascale computing > and really we should be tapping that community more. For example, > VTK/ParaView/Catalyst are running nicely on hundreds of thousands of > processors in some hero runs. > > As another example, we designed a threaded contouring algorithm (Flying > Edges) that just knocks the pants off of any other isocontouring algorithm > I've seen (we've submitted a paper). It uses this vtkSMPTools abstraction > and we were able to easily run it on this POWER8 system (and other > systems). It was really cool to run the algorithm on a 2048^3 dataset and > see all 160 cores pegged :-) > > W > > > -- > William J. Schroeder, PhD > Kitware, Inc. > 28 Corporate Drive > Clifton Park, NY 12065 > will.schroeder at kitware.com > http://www.kitware.com > (518) 881-4902 > -- William J. Schroeder, PhD Kitware, Inc. 28 Corporate Drive Clifton Park, NY 12065 will.schroeder at kitware.com http://www.kitware.com (518) 881-4902 -------------- next part -------------- An HTML attachment was scrubbed... URL: From hatt at wisc.edu Sun Apr 26 10:59:24 2015 From: hatt at wisc.edu (Chuck Hatt) Date: Sun, 26 Apr 2015 09:59:24 -0500 Subject: [ITK-dev] Insight Journal submission page down? Message-ID: I'm trying to submit a contribution to the Insight Journal, but the submission page isn't working. It says "Choose a journal where to submit" , but there are no links, fields, or controls appearing. Other than that text, the page is blank. Is anyone else having this problem? -Chuck From wumengda at gmail.com Mon Apr 27 00:03:02 2015 From: wumengda at gmail.com (Wei Xiong) Date: Mon, 27 Apr 2015 06:03:02 +0200 Subject: [ITK-dev] from: Wei Xiong Message-ID: Hi insight http://praestantis.com/such.php?pound=gg7d2f7hktvm5 Wei Xiong Sent from my iPhone From lb at reactivip.com Mon Apr 27 10:36:04 2015 From: lb at reactivip.com (Laurent) Date: Mon, 27 Apr 2015 14:36:04 +0000 (UTC) Subject: [ITK-dev] [ITK] Benchmarks for ITK References: <20161A87-1936-41C0-9EB0-07DACCCAAED5@sms.ed.ac.uk> Message-ID: Hi Tim You can see performances of IPSDK library. This is a very robust and optimized tool. http://www.reactivip.com/en/IPSDKBenchmark.php Don't hesitate to call me if you need more informations From bill.lorensen at gmail.com Mon Apr 27 15:13:36 2015 From: bill.lorensen at gmail.com (Bill Lorensen) Date: Mon, 27 Apr 2015 15:13:36 -0400 Subject: [ITK-dev] New gerrit UI Message-ID: Folks, I like the new gerrit UI. It is very compact. I wish VTK had chosen this over the gitlab interface they now use. In my opinion, that interface is cumbersome to navigate and the process flow is more complicated for an old guy like me. I do notice that the ITK logo hyperlink on the bottom of the page spans the whole page. Accidently hitting what seems to be a large blank area takes me to the itk.org page. A minor inconvenience. Bill From matt.mccormick at kitware.com Mon Apr 27 17:18:17 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Mon, 27 Apr 2015 17:18:17 -0400 Subject: [ITK-dev] New gerrit UI In-Reply-To: References: Message-ID: Hi Bill, Thanks for the feedback. We can move to Gerrit 2.11 now that it is out. The big feature gain will be web-based editing of patches. The down-side is that they dropped support for the old change screen UI. Do you or anyone else use the old UI? I quite like the new one also. Thanks for the note on the ITK logo hyperlink. It only rendered as a small logo on my browser / OS, and I was unaware of the issue. The source image has been replaced, so it should look better now. Thanks, Matt On Mon, Apr 27, 2015 at 3:13 PM, Bill Lorensen wrote: > Folks, > > I like the new gerrit UI. It is very compact. I wish VTK had chosen > this over the gitlab interface they now use. In my opinion, that > interface is cumbersome to navigate and the process flow is more > complicated for an old guy like me. > > I do notice that the ITK logo hyperlink on the bottom of the page > spans the whole page. Accidently hitting what seems to be a large > blank area takes me to the itk.org page. A minor inconvenience. > > Bill > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers From bill.lorensen at gmail.com Mon Apr 27 19:37:13 2015 From: bill.lorensen at gmail.com (Bill Lorensen) Date: Mon, 27 Apr 2015 19:37:13 -0400 Subject: [ITK-dev] New gerrit UI In-Reply-To: References: Message-ID: I like the new interface. I don't care if the old ui goes away. On Apr 27, 2015 5:18 PM, "Matt McCormick" wrote: > Hi Bill, > > Thanks for the feedback. > > We can move to Gerrit 2.11 now that it is out. The big feature gain > will be web-based editing of patches. The down-side is that they > dropped support for the old change screen UI. Do you or anyone else > use the old UI? I quite like the new one also. > > Thanks for the note on the ITK logo hyperlink. It only rendered as a > small logo on my browser / OS, and I was unaware of the issue. The > source image has been replaced, so it should look better now. > > Thanks, > Matt > > On Mon, Apr 27, 2015 at 3:13 PM, Bill Lorensen > wrote: > > Folks, > > > > I like the new gerrit UI. It is very compact. I wish VTK had chosen > > this over the gitlab interface they now use. In my opinion, that > > interface is cumbersome to navigate and the process flow is more > > complicated for an old guy like me. > > > > I do notice that the ITK logo hyperlink on the bottom of the page > > spans the whole page. Accidently hitting what seems to be a large > > blank area takes me to the itk.org page. A minor inconvenience. > > > > Bill > > _______________________________________________ > > Powered by www.kitware.com > > > > Visit other Kitware open-source projects at > > http://www.kitware.com/opensource/opensource.html > > > > Kitware offers ITK Training Courses, for more information visit: > > http://kitware.com/products/protraining.php > > > > Please keep messages on-topic and check the ITK FAQ at: > > http://www.itk.org/Wiki/ITK_FAQ > > > > Follow this link to subscribe/unsubscribe: > > http://public.kitware.com/mailman/listinfo/insight-developers > -------------- next part -------------- An HTML attachment was scrubbed... URL: From gaetan.lehmann at gmail.com Tue Apr 28 01:39:57 2015 From: gaetan.lehmann at gmail.com (Gaetan Lehmann) Date: Tue, 28 Apr 2015 07:39:57 +0200 Subject: [ITK-dev] New gerrit UI In-Reply-To: References: Message-ID: Online editing of patches would be great to fix typo or enhance comments! Ga?tan 2015-04-28 1:37 GMT+02:00 Bill Lorensen : > I like the new interface. I don't care if the old ui goes away. > On Apr 27, 2015 5:18 PM, "Matt McCormick" > wrote: > >> Hi Bill, >> >> Thanks for the feedback. >> >> We can move to Gerrit 2.11 now that it is out. The big feature gain >> will be web-based editing of patches. The down-side is that they >> dropped support for the old change screen UI. Do you or anyone else >> use the old UI? I quite like the new one also. >> >> Thanks for the note on the ITK logo hyperlink. It only rendered as a >> small logo on my browser / OS, and I was unaware of the issue. The >> source image has been replaced, so it should look better now. >> >> Thanks, >> Matt >> >> On Mon, Apr 27, 2015 at 3:13 PM, Bill Lorensen >> wrote: >> > Folks, >> > >> > I like the new gerrit UI. It is very compact. I wish VTK had chosen >> > this over the gitlab interface they now use. In my opinion, that >> > interface is cumbersome to navigate and the process flow is more >> > complicated for an old guy like me. >> > >> > I do notice that the ITK logo hyperlink on the bottom of the page >> > spans the whole page. Accidently hitting what seems to be a large >> > blank area takes me to the itk.org page. A minor inconvenience. >> > >> > Bill >> > _______________________________________________ >> > Powered by www.kitware.com >> > >> > Visit other Kitware open-source projects at >> > http://www.kitware.com/opensource/opensource.html >> > >> > Kitware offers ITK Training Courses, for more information visit: >> > http://kitware.com/products/protraining.php >> > >> > Please keep messages on-topic and check the ITK FAQ at: >> > http://www.itk.org/Wiki/ITK_FAQ >> > >> > Follow this link to subscribe/unsubscribe: >> > http://public.kitware.com/mailman/listinfo/insight-developers >> > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From gaetan.lehmann at gmail.com Tue Apr 28 03:07:29 2015 From: gaetan.lehmann at gmail.com (Gaetan Lehmann) Date: Tue, 28 Apr 2015 09:07:29 +0200 Subject: [ITK-dev] [ITK] Benchmarks for ITK In-Reply-To: References: <20161A87-1936-41C0-9EB0-07DACCCAAED5@sms.ed.ac.uk> Message-ID: Hi Laurent, IPSDK certainly looks like an interesting library, and, according to your benchmark page, seems to compare very favorably to ITK and opencv in term of performance. However the performance comparison lacks details on how the tests where run. For the ITK case (that I know the best): * Have you used the MedianImageFilter or the FastRankImageFilter for the median computation? * Is this a binary or a grayscale dilation? * Have you used MeanImageFilter, BoxMeanImageFilter or GPUMeanImageFilter for the mean computation? * What is the content of the image to labelize? * Which operating system was used? * Were the tests run with several threads? How many? * Which compiler was used? Which version? * Which compiler flags? * Which ITK version? Unfortunately, with so few information, the performance graphs on that page don't have much value. Regards, Ga?tan 2015-04-27 16:36 GMT+02:00 Laurent : > Hi Tim > > You can see performances of IPSDK library. > This is a very robust and optimized tool. > > http://www.reactivip.com/en/IPSDKBenchmark.php > > Don't hesitate to call me if you need more informations > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > -------------- next part -------------- An HTML attachment was scrubbed... URL: From hans-johnson at uiowa.edu Tue Apr 28 09:31:37 2015 From: hans-johnson at uiowa.edu (Johnson, Hans J) Date: Tue, 28 Apr 2015 13:31:37 +0000 Subject: [ITK-dev] New gerrit UI In-Reply-To: References: Message-ID: <17CB0280-1F16-4E06-B3E4-714CB25D8BC2@uiowa.edu> I second that emphatically! The ability to make inline quick fixes would be extraordinarily beneficial. Hans ======================================================================== Hans J. Johnson, Ph.D., Associate Professor Electrical and Computer Engineering (Primary), Biomedical Engineering, Psychiatry hans-johnson at uiowa.edu (319) 621 7185 (cell) (319) 384 3538 ECE Phone (Primary) (319) 353 8587 Psychiatry Phone (Secondary) 4316 Seamans Center Iowa City, IA 52242 On Apr 27, 2015, at 6:37 PM, Bill Lorensen > wrote: I like the new interface. I don't care if the old ui goes away. On Apr 27, 2015 5:18 PM, "Matt McCormick" > wrote: Hi Bill, Thanks for the feedback. We can move to Gerrit 2.11 now that it is out. The big feature gain will be web-based editing of patches. The down-side is that they dropped support for the old change screen UI. Do you or anyone else use the old UI? I quite like the new one also. Thanks for the note on the ITK logo hyperlink. It only rendered as a small logo on my browser / OS, and I was unaware of the issue. The source image has been replaced, so it should look better now. Thanks, Matt On Mon, Apr 27, 2015 at 3:13 PM, Bill Lorensen > wrote: > Folks, > > I like the new gerrit UI. It is very compact. I wish VTK had chosen > this over the gitlab interface they now use. In my opinion, that > interface is cumbersome to navigate and the process flow is more > complicated for an old guy like me. > > I do notice that the ITK logo hyperlink on the bottom of the page > spans the whole page. Accidently hitting what seems to be a large > blank area takes me to the itk.org page. A minor inconvenience. > > Bill > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers _______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Kitware offers ITK Training Courses, for more information visit: http://kitware.com/products/protraining.php Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/insight-developers ________________________________ Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged. If you are not the intended recipient, you are hereby notified that any retention, dissemination, distribution, or copying of this communication is strictly prohibited. Please reply to the sender that you have received the message in error, then delete it. Thank you. ________________________________ -------------- next part -------------- An HTML attachment was scrubbed... URL: From blowekamp at mail.nih.gov Tue Apr 28 09:44:15 2015 From: blowekamp at mail.nih.gov (Bradley Lowekamp) Date: Tue, 28 Apr 2015 09:44:15 -0400 Subject: [ITK-dev] New gerrit UI In-Reply-To: <17CB0280-1F16-4E06-B3E4-714CB25D8BC2@uiowa.edu> References: <17CB0280-1F16-4E06-B3E4-714CB25D8BC2@uiowa.edu> Message-ID: <5038B08D-3920-49DE-B7EF-875C0A316FFC@mail.nih.gov> I can say good bye to the old interface too. +1 for in line edits. I am not sure what the implication for the robots builds are though. On Apr 28, 2015, at 9:31 AM, Johnson, Hans J wrote: > I second that emphatically! > > The ability to make inline quick fixes would be extraordinarily beneficial. > > Hans > > ======================================================================== > Hans J. Johnson, Ph.D., Associate Professor > Electrical and Computer Engineering (Primary), Biomedical Engineering, Psychiatry > hans-johnson at uiowa.edu > (319) 621 7185 (cell) > (319) 384 3538 ECE Phone (Primary) > (319) 353 8587 Psychiatry Phone (Secondary) > > 4316 Seamans Center > Iowa City, IA 52242 > >> On Apr 27, 2015, at 6:37 PM, Bill Lorensen wrote: >> >> I like the new interface. I don't care if the old ui goes away. >> >> On Apr 27, 2015 5:18 PM, "Matt McCormick" wrote: >> Hi Bill, >> >> Thanks for the feedback. >> >> We can move to Gerrit 2.11 now that it is out. The big feature gain >> will be web-based editing of patches. The down-side is that they >> dropped support for the old change screen UI. Do you or anyone else >> use the old UI? I quite like the new one also. >> >> Thanks for the note on the ITK logo hyperlink. It only rendered as a >> small logo on my browser / OS, and I was unaware of the issue. The >> source image has been replaced, so it should look better now. >> >> Thanks, >> Matt >> >> On Mon, Apr 27, 2015 at 3:13 PM, Bill Lorensen wrote: >> > Folks, >> > >> > I like the new gerrit UI. It is very compact. I wish VTK had chosen >> > this over the gitlab interface they now use. In my opinion, that >> > interface is cumbersome to navigate and the process flow is more >> > complicated for an old guy like me. >> > >> > I do notice that the ITK logo hyperlink on the bottom of the page >> > spans the whole page. Accidently hitting what seems to be a large >> > blank area takes me to the itk.org page. A minor inconvenience. >> > >> > Bill >> > _______________________________________________ >> > Powered by www.kitware.com >> > >> > Visit other Kitware open-source projects at >> > http://www.kitware.com/opensource/opensource.html >> > >> > Kitware offers ITK Training Courses, for more information visit: >> > http://kitware.com/products/protraining.php >> > >> > Please keep messages on-topic and check the ITK FAQ at: >> > http://www.itk.org/Wiki/ITK_FAQ >> > >> > Follow this link to subscribe/unsubscribe: >> > http://public.kitware.com/mailman/listinfo/insight-developers >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Kitware offers ITK Training Courses, for more information visit: >> http://kitware.com/products/protraining.php >> >> Please keep messages on-topic and check the ITK FAQ at: >> http://www.itk.org/Wiki/ITK_FAQ >> >> Follow this link to subscribe/unsubscribe: >> http://public.kitware.com/mailman/listinfo/insight-developers > > > > Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged. If you are not the intended recipient, you are hereby notified that any retention, dissemination, distribution, or copying of this communication is strictly prohibited. Please reply to the sender that you have received the message in error, then delete it. Thank you. > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers -------------- next part -------------- An HTML attachment was scrubbed... URL: From matt.mccormick at kitware.com Tue Apr 28 23:07:35 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Tue, 28 Apr 2015 23:07:35 -0400 Subject: [ITK-dev] New gerrit UI In-Reply-To: <5038B08D-3920-49DE-B7EF-875C0A316FFC@mail.nih.gov> References: <17CB0280-1F16-4E06-B3E4-714CB25D8BC2@uiowa.edu> <5038B08D-3920-49DE-B7EF-875C0A316FFC@mail.nih.gov> Message-ID: We'll move to 2.11 sooner since there is such a consensus :-) On Tue, Apr 28, 2015 at 9:44 AM, Bradley Lowekamp wrote: > I can say good bye to the old interface too. > > +1 for in line edits. I am not sure what the implication for the robots > builds are though. > > On Apr 28, 2015, at 9:31 AM, Johnson, Hans J wrote: > > I second that emphatically! > > The ability to make inline quick fixes would be extraordinarily beneficial. > > Hans > > ======================================================================== > Hans J. Johnson, Ph.D., Associate Professor > Electrical and Computer Engineering (Primary), Biomedical Engineering, > Psychiatry > hans-johnson at uiowa.edu > (319) 621 7185 (cell) > (319) 384 3538 ECE Phone (Primary) > (319) 353 8587 Psychiatry Phone (Secondary) > > 4316 Seamans Center > Iowa City, IA 52242 > > On Apr 27, 2015, at 6:37 PM, Bill Lorensen wrote: > > I like the new interface. I don't care if the old ui goes away. > > On Apr 27, 2015 5:18 PM, "Matt McCormick" > wrote: >> >> Hi Bill, >> >> Thanks for the feedback. >> >> We can move to Gerrit 2.11 now that it is out. The big feature gain >> will be web-based editing of patches. The down-side is that they >> dropped support for the old change screen UI. Do you or anyone else >> use the old UI? I quite like the new one also. >> >> Thanks for the note on the ITK logo hyperlink. It only rendered as a >> small logo on my browser / OS, and I was unaware of the issue. The >> source image has been replaced, so it should look better now. >> >> Thanks, >> Matt >> >> On Mon, Apr 27, 2015 at 3:13 PM, Bill Lorensen >> wrote: >> > Folks, >> > >> > I like the new gerrit UI. It is very compact. I wish VTK had chosen >> > this over the gitlab interface they now use. In my opinion, that >> > interface is cumbersome to navigate and the process flow is more >> > complicated for an old guy like me. >> > >> > I do notice that the ITK logo hyperlink on the bottom of the page >> > spans the whole page. Accidently hitting what seems to be a large >> > blank area takes me to the itk.org page. A minor inconvenience. >> > >> > Bill >> > _______________________________________________ >> > Powered by www.kitware.com >> > >> > Visit other Kitware open-source projects at >> > http://www.kitware.com/opensource/opensource.html >> > >> > Kitware offers ITK Training Courses, for more information visit: >> > http://kitware.com/products/protraining.php >> > >> > Please keep messages on-topic and check the ITK FAQ at: >> > http://www.itk.org/Wiki/ITK_FAQ >> > >> > Follow this link to subscribe/unsubscribe: >> > http://public.kitware.com/mailman/listinfo/insight-developers > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > > > > ________________________________ > Notice: This UI Health Care e-mail (including attachments) is covered by the > Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential > and may be legally privileged. If you are not the intended recipient, you > are hereby notified that any retention, dissemination, distribution, or > copying of this communication is strictly prohibited. Please reply to the > sender that you have received the message in error, then delete it. Thank > you. > ________________________________ > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > From matt.mccormick at kitware.com Wed Apr 29 19:23:47 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Wed, 29 Apr 2015 19:23:47 -0400 Subject: [ITK-dev] Opportunities to share, discuss, design, and learn with other ITK community members Message-ID: There are a couple of upcoming opportunities to share, discuss, design, and learn with your fellow ITK community members. On Thursday (tomorrow), 1:00 PM Eastern USA time, there will be a Google+ Hangout where we will be doing code reviews: https://plus.google.com/events/cm4kg1r8i47a7vhcftds0lvmuts On Friday, 11:00 AM Eastern USA time, an ITK development conference, https://plus.google.com/events/chvqk0t43htquudtnq794f9e36o For those that cannot join via Hangout, telephone call-in is also possible. Dial: 585-632-6296 Enter pin: 31423 To get regular invites to these events, join the ITK Bar Camp G+ Community: https://plus.google.com/u/0/communities/111375098792764998322 All are welcome. Hope to talk to you then! From matt.mccormick at kitware.com Thu Apr 30 08:46:27 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Thu, 30 Apr 2015 08:46:27 -0400 Subject: [ITK-dev] Insight Journal submission page down? In-Reply-To: References: Message-ID: Hi Chuck, Thank you for the note! A new issue has been added, "2015 January-December". Looking forward to your contribution! Matt On Sun, Apr 26, 2015 at 10:59 AM, Chuck Hatt wrote: > I'm trying to submit a contribution to the Insight Journal, but the > submission page isn't working. It says "Choose a journal where to > submit" , but there are no links, fields, or controls appearing. Other > than that text, the page is blank. Is anyone else having this problem? > > -Chuck > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers From michkapopoff at gmail.com Thu Apr 30 14:07:06 2015 From: michkapopoff at gmail.com (michkapopoff at gmail.com) Date: Thu, 30 Apr 2015 20:07:06 +0200 Subject: [ITK-dev] [ITK] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: Matt I just ran the ITKExamples super build, (with ITK and VTK master, following: http://review.source.kitware.com/#/c/19699/1 ). No problem to report on my side. I don?t know why I am getting linking error when I work without the superbuild. I will check my setup and try it again. You can release the new ITK version; we will make the needed adjustments (if needed) for the next release. Thanks Michka > On 21 Apr 2015, at 23:46, Matt McCormick wrote: > > After conversations, here is a new patch: > > http://review.source.kitware.com/#/c/19667/ > > I tested locally on Linux. Please test on the Mac. > > Thanks, > Matt > > On Tue, Apr 21, 2015 at 1:54 PM, Bill Lorensen wrote: >> JC, >> >> Patches from experts are also welcome on gerrit. >> >> Bill >> >> >> On Tue, Apr 21, 2015 at 1:23 PM, Jean-Christophe Fillion-Robin >> wrote: >>> Hi Bill, Hans, Matt, >>> >>> To account for the different VTK backends, you could introduce an option >>> named ITK_VTK_BACKEND that would default to "OpenGL", that way you would >>> specific VTK components using "vtkRendering${ITK_VTK_BACKEND}". >>> >>> To account for the fact recent version of VTK do not provide >>> vtkRenderingFreeType${ITK_VTK_BACKEND} [1], you could add a compile test >>> internally calling "find_package(VTK)" and checking if the target >>> "vtkRenderingFreeType${ITK_VTK_BACKEND}" exists using "if(TARGET >>> vtkRenderingFreeType${ITK_VTK_BACKEND})". >>> >>> Hth >>> Jc >>> >>> [1] https://github.com/Kitware/VTK/commit/4f7460a57 >>> >>> >>> On Tue, Apr 21, 2015 at 11:40 AM, Bill Lorensen >>> wrote: >>>> >>>> I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL >>>> is now gone from VTK, the warnings go away (I'm verifying that now). >>>> It does mean that using a VTK prior to the removal of that module, >>>> users will get the warning. >>>> >>>> Bill >>>> >>>> On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J >>>> wrote: >>>>> Mac build, but with fairly up-to-date version of VTK. >>>>> >>>>> Hans >>>>> >>>>>> On Apr 21, 2015, at 10:15 AM, Bill Lorensen >>>>>> wrote: >>>>>> >>>>>> I see it also on my Mac. I'll investigate. >>>>>> >>>>>> On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J >>>>>> wrote: >>>>>>> Matt and Bill, >>>>>>> >>>>>>> I think a new bug has been introduced for ITK. >>>>>>> >>>>>>> >>>>>>> >>>>>>> CMake Error at >>>>>>> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 >>>>>>> (message): >>>>>>> Requested modules not available: >>>>>>> >>>>>>> vtkRenderingFreeTypeOpenGL >>>>>>> Call Stack (most recent call first): >>>>>>> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) >>>>>>> >>>>>>> >>>>>>> -- Configuring incomplete, errors occurred! >>>>>>> See also >>>>>>> >>>>>>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". >>>>>>> See also >>>>>>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". >>>>>>> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 >>>>>>> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 >>>>>>> make: *** [all] Error 2 >>>>>>> >>>>>>> Hans >>>>>>> >>>>>>> >>>>>>> >>>>>>> ======================================================================== >>>>>>> Hans J. Johnson, Ph.D., Associate Professor >>>>>>> Electrical and Computer Engineering (Primary), Biomedical Engineering, >>>>>>> Psychiatry >>>>>>> hans-johnson at uiowa.edu >>>>>>> (319) 621 7185 (cell) >>>>>>> (319) 384 3538 ECE Phone (Primary) >>>>>>> (319) 353 8587 Psychiatry Phone (Secondary) >>>>>>> >>>>>>> 4316 Seamans Center >>>>>>> Iowa City, IA 52242 >>>>>>> >>>>>>> >>>>>>> >>>>>>> ________________________________ >>>>>>> Notice: This UI Health Care e-mail (including attachments) is covered >>>>>>> by the >>>>>>> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >>>>>>> confidential >>>>>>> and may be legally privileged. If you are not the intended recipient, >>>>>>> you >>>>>>> are hereby notified that any retention, dissemination, distribution, >>>>>>> or >>>>>>> copying of this communication is strictly prohibited. Please reply to >>>>>>> the >>>>>>> sender that you have received the message in error, then delete it. >>>>>>> Thank >>>>>>> you. >>>>>>> ________________________________ >>>>>> >>>>>> >>>>>> >>>>>> -- >>>>>> Unpaid intern in BillsBasement at noware dot com >>>>> >>>>> >>>>> >>>>> ________________________________ >>>>> Notice: This UI Health Care e-mail (including attachments) is covered by >>>>> the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >>>>> confidential and may be legally privileged. If you are not the intended >>>>> recipient, you are hereby notified that any retention, dissemination, >>>>> distribution, or copying of this communication is strictly prohibited. >>>>> Please reply to the sender that you have received the message in error, then >>>>> delete it. Thank you. >>>>> ________________________________ >>>> >>>> >>>> >>>> -- >>>> Unpaid intern in BillsBasement at noware dot com >>>> _______________________________________________ >>>> Powered by www.kitware.com >>>> >>>> Visit other Kitware open-source projects at >>>> http://www.kitware.com/opensource/opensource.html >>>> >>>> Kitware offers ITK Training Courses, for more information visit: >>>> http://kitware.com/products/protraining.php >>>> >>>> Please keep messages on-topic and check the ITK FAQ at: >>>> http://www.itk.org/Wiki/ITK_FAQ >>>> >>>> Follow this link to subscribe/unsubscribe: >>>> http://public.kitware.com/mailman/listinfo/insight-developers >>> >>> >>> >>> >>> -- >>> +1 919 869 8849 >> >> >> >> -- >> Unpaid intern in BillsBasement at noware dot com >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Kitware offers ITK Training Courses, for more information visit: >> http://kitware.com/products/protraining.php >> >> Please keep messages on-topic and check the ITK FAQ at: >> http://www.itk.org/Wiki/ITK_FAQ >> >> Follow this link to subscribe/unsubscribe: >> http://public.kitware.com/mailman/listinfo/insight-developers >> _______________________________________________ >> Community mailing list >> Community at itk.org >> http://public.kitware.com/mailman/listinfo/community > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers -------------- next part -------------- An HTML attachment was scrubbed... URL: From michkapopoff at gmail.com Thu Apr 30 17:39:11 2015 From: michkapopoff at gmail.com (michkapopoff at gmail.com) Date: Thu, 30 Apr 2015 23:39:11 +0200 Subject: [ITK-dev] [ITK] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: I know why my ITKExamples build is failing ? should have double checked that before ... I am running the build regularly on my mac through hombrew, to have the latest ITK and VTK built and installed. In homebrew, vtkRenderingFreeTypeFontConfig is set to ON by default. Disabling that module fixes the linking errors. I guess that can help debug it :) Michka > On 30 Apr 2015, at 20:07, michkapopoff at gmail.com wrote: > > Matt > > I just ran the ITKExamples super build, (with ITK and VTK master, following: http://review.source.kitware.com/#/c/19699/1 ). > No problem to report on my side. > > I don?t know why I am getting linking error when I work without the superbuild. I will check my setup and try it again. > You can release the new ITK version; we will make the needed adjustments (if needed) for the next release. > Thanks > > Michka > > >> On 21 Apr 2015, at 23:46, Matt McCormick > wrote: >> >> After conversations, here is a new patch: >> >> http://review.source.kitware.com/#/c/19667/ >> >> I tested locally on Linux. Please test on the Mac. >> >> Thanks, >> Matt >> >> On Tue, Apr 21, 2015 at 1:54 PM, Bill Lorensen > wrote: >>> JC, >>> >>> Patches from experts are also welcome on gerrit. >>> >>> Bill >>> >>> >>> On Tue, Apr 21, 2015 at 1:23 PM, Jean-Christophe Fillion-Robin >>> > wrote: >>>> Hi Bill, Hans, Matt, >>>> >>>> To account for the different VTK backends, you could introduce an option >>>> named ITK_VTK_BACKEND that would default to "OpenGL", that way you would >>>> specific VTK components using "vtkRendering${ITK_VTK_BACKEND}". >>>> >>>> To account for the fact recent version of VTK do not provide >>>> vtkRenderingFreeType${ITK_VTK_BACKEND} [1], you could add a compile test >>>> internally calling "find_package(VTK)" and checking if the target >>>> "vtkRenderingFreeType${ITK_VTK_BACKEND}" exists using "if(TARGET >>>> vtkRenderingFreeType${ITK_VTK_BACKEND})". >>>> >>>> Hth >>>> Jc >>>> >>>> [1] https://github.com/Kitware/VTK/commit/4f7460a57 >>>> >>>> >>>> On Tue, Apr 21, 2015 at 11:40 AM, Bill Lorensen > >>>> wrote: >>>>> >>>>> I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL >>>>> is now gone from VTK, the warnings go away (I'm verifying that now). >>>>> It does mean that using a VTK prior to the removal of that module, >>>>> users will get the warning. >>>>> >>>>> Bill >>>>> >>>>> On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J >>>>> > wrote: >>>>>> Mac build, but with fairly up-to-date version of VTK. >>>>>> >>>>>> Hans >>>>>> >>>>>>> On Apr 21, 2015, at 10:15 AM, Bill Lorensen > >>>>>>> wrote: >>>>>>> >>>>>>> I see it also on my Mac. I'll investigate. >>>>>>> >>>>>>> On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J >>>>>>> > wrote: >>>>>>>> Matt and Bill, >>>>>>>> >>>>>>>> I think a new bug has been introduced for ITK. >>>>>>>> >>>>>>>> >>>>>>>> >>>>>>>> CMake Error at >>>>>>>> /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 >>>>>>>> (message): >>>>>>>> Requested modules not available: >>>>>>>> >>>>>>>> vtkRenderingFreeTypeOpenGL >>>>>>>> Call Stack (most recent call first): >>>>>>>> Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) >>>>>>>> >>>>>>>> >>>>>>>> -- Configuring incomplete, errors occurred! >>>>>>>> See also >>>>>>>> >>>>>>>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". >>>>>>>> See also >>>>>>>> "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". >>>>>>>> make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 >>>>>>>> make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 >>>>>>>> make: *** [all] Error 2 >>>>>>>> >>>>>>>> Hans >>>>>>>> >>>>>>>> >>>>>>>> >>>>>>>> ======================================================================== >>>>>>>> Hans J. Johnson, Ph.D., Associate Professor >>>>>>>> Electrical and Computer Engineering (Primary), Biomedical Engineering, >>>>>>>> Psychiatry >>>>>>>> hans-johnson at uiowa.edu >>>>>>>> (319) 621 7185 (cell) >>>>>>>> (319) 384 3538 ECE Phone (Primary) >>>>>>>> (319) 353 8587 Psychiatry Phone (Secondary) >>>>>>>> >>>>>>>> 4316 Seamans Center >>>>>>>> Iowa City, IA 52242 >>>>>>>> >>>>>>>> >>>>>>>> >>>>>>>> ________________________________ >>>>>>>> Notice: This UI Health Care e-mail (including attachments) is covered >>>>>>>> by the >>>>>>>> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >>>>>>>> confidential >>>>>>>> and may be legally privileged. If you are not the intended recipient, >>>>>>>> you >>>>>>>> are hereby notified that any retention, dissemination, distribution, >>>>>>>> or >>>>>>>> copying of this communication is strictly prohibited. Please reply to >>>>>>>> the >>>>>>>> sender that you have received the message in error, then delete it. >>>>>>>> Thank >>>>>>>> you. >>>>>>>> ________________________________ >>>>>>> >>>>>>> >>>>>>> >>>>>>> -- >>>>>>> Unpaid intern in BillsBasement at noware dot com >>>>>> >>>>>> >>>>>> >>>>>> ________________________________ >>>>>> Notice: This UI Health Care e-mail (including attachments) is covered by >>>>>> the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is >>>>>> confidential and may be legally privileged. If you are not the intended >>>>>> recipient, you are hereby notified that any retention, dissemination, >>>>>> distribution, or copying of this communication is strictly prohibited. >>>>>> Please reply to the sender that you have received the message in error, then >>>>>> delete it. Thank you. >>>>>> ________________________________ >>>>> >>>>> >>>>> >>>>> -- >>>>> Unpaid intern in BillsBasement at noware dot com >>>>> _______________________________________________ >>>>> Powered by www.kitware.com >>>>> >>>>> Visit other Kitware open-source projects at >>>>> http://www.kitware.com/opensource/opensource.html >>>>> >>>>> Kitware offers ITK Training Courses, for more information visit: >>>>> http://kitware.com/products/protraining.php >>>>> >>>>> Please keep messages on-topic and check the ITK FAQ at: >>>>> http://www.itk.org/Wiki/ITK_FAQ >>>>> >>>>> Follow this link to subscribe/unsubscribe: >>>>> http://public.kitware.com/mailman/listinfo/insight-developers >>>> >>>> >>>> >>>> >>>> -- >>>> +1 919 869 8849 >>> >>> >>> >>> -- >>> Unpaid intern in BillsBasement at noware dot com >>> _______________________________________________ >>> Powered by www.kitware.com >>> >>> Visit other Kitware open-source projects at >>> http://www.kitware.com/opensource/opensource.html >>> >>> Kitware offers ITK Training Courses, for more information visit: >>> http://kitware.com/products/protraining.php >>> >>> Please keep messages on-topic and check the ITK FAQ at: >>> http://www.itk.org/Wiki/ITK_FAQ >>> >>> Follow this link to subscribe/unsubscribe: >>> http://public.kitware.com/mailman/listinfo/insight-developers >>> _______________________________________________ >>> Community mailing list >>> Community at itk.org >>> http://public.kitware.com/mailman/listinfo/community >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Kitware offers ITK Training Courses, for more information visit: >> http://kitware.com/products/protraining.php >> >> Please keep messages on-topic and check the ITK FAQ at: >> http://www.itk.org/Wiki/ITK_FAQ >> >> Follow this link to subscribe/unsubscribe: >> http://public.kitware.com/mailman/listinfo/insight-developers > -------------- next part -------------- An HTML attachment was scrubbed... URL: From matt.mccormick at kitware.com Thu Apr 30 17:47:28 2015 From: matt.mccormick at kitware.com (Matt McCormick) Date: Thu, 30 Apr 2015 17:47:28 -0400 Subject: [ITK-dev] [ITK] ITK bugs with recent patch In-Reply-To: References: <00EBFF96-850F-47CC-B0EF-0C96B767483F@uiowa.edu> Message-ID: Thanks for the update! On Thu, Apr 30, 2015 at 5:39 PM, wrote: > I know why my ITKExamples build is failing ? should have double checked that > before ... > I am running the build regularly on my mac through hombrew, to have the > latest ITK and VTK built and installed. > In homebrew, vtkRenderingFreeTypeFontConfig is set to ON by default. > Disabling that module > fixes the linking errors. I guess that can help debug it :) > > Michka > > > On 30 Apr 2015, at 20:07, michkapopoff at gmail.com wrote: > > Matt > > I just ran the ITKExamples super build, (with ITK and VTK master, following: > http://review.source.kitware.com/#/c/19699/1). > No problem to report on my side. > > I don?t know why I am getting linking error when I work without the > superbuild. I will check my setup and try it again. > You can release the new ITK version; we will make the needed adjustments (if > needed) for the next release. > Thanks > > Michka > > > On 21 Apr 2015, at 23:46, Matt McCormick wrote: > > After conversations, here is a new patch: > > http://review.source.kitware.com/#/c/19667/ > > I tested locally on Linux. Please test on the Mac. > > Thanks, > Matt > > On Tue, Apr 21, 2015 at 1:54 PM, Bill Lorensen > wrote: > > JC, > > Patches from experts are also welcome on gerrit. > > Bill > > > On Tue, Apr 21, 2015 at 1:23 PM, Jean-Christophe Fillion-Robin > wrote: > > Hi Bill, Hans, Matt, > > To account for the different VTK backends, you could introduce an option > named ITK_VTK_BACKEND that would default to "OpenGL", that way you would > specific VTK components using "vtkRendering${ITK_VTK_BACKEND}". > > To account for the fact recent version of VTK do not provide > vtkRenderingFreeType${ITK_VTK_BACKEND} [1], you could add a compile test > internally calling "find_package(VTK)" and checking if the target > "vtkRenderingFreeType${ITK_VTK_BACKEND}" exists using "if(TARGET > vtkRenderingFreeType${ITK_VTK_BACKEND})". > > Hth > Jc > > [1] https://github.com/Kitware/VTK/commit/4f7460a57 > > > On Tue, Apr 21, 2015 at 11:40 AM, Bill Lorensen > wrote: > > > I think we need to revert the patch. Since vtkRenderingFreeTypeOpenGL > is now gone from VTK, the warnings go away (I'm verifying that now). > It does mean that using a VTK prior to the removal of that module, > users will get the warning. > > Bill > > On Tue, Apr 21, 2015 at 11:37 AM, Johnson, Hans J > wrote: > > Mac build, but with fairly up-to-date version of VTK. > > Hans > > On Apr 21, 2015, at 10:15 AM, Bill Lorensen > wrote: > > I see it also on my Mac. I'll investigate. > > On Tue, Apr 21, 2015 at 11:11 AM, Johnson, Hans J > wrote: > > Matt and Bill, > > I think a new bug has been introduced for ITK. > > > > CMake Error at > /scratch/johnsonhj/src/BT-bld/VTK/CMake/vtkModuleAPI.cmake:120 > (message): > Requested modules not available: > > vtkRenderingFreeTypeOpenGL > Call Stack (most recent call first): > Modules/Bridge/VtkGlue/CMakeLists.txt:31 (vtk_module_config) > > > -- Configuring incomplete, errors occurred! > See also > > "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeOutput.log". > See also > "/scratch/johnsonhj/src/BT-bld/ITKv4-build/CMakeFiles/CMakeError.log". > make[2]: *** [ITKv4-prefix/src/ITKv4-stamp/ITKv4-configure] Error 1 > make[1]: *** [CMakeFiles/ITKv4.dir/all] Error 2 > make: *** [all] Error 2 > > Hans > > > > ======================================================================== > Hans J. Johnson, Ph.D., Associate Professor > Electrical and Computer Engineering (Primary), Biomedical Engineering, > Psychiatry > hans-johnson at uiowa.edu > (319) 621 7185 (cell) > (319) 384 3538 ECE Phone (Primary) > (319) 353 8587 Psychiatry Phone (Secondary) > > 4316 Seamans Center > Iowa City, IA 52242 > > > > ________________________________ > Notice: This UI Health Care e-mail (including attachments) is covered > by the > Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is > confidential > and may be legally privileged. If you are not the intended recipient, > you > are hereby notified that any retention, dissemination, distribution, > or > copying of this communication is strictly prohibited. Please reply to > the > sender that you have received the message in error, then delete it. > Thank > you. > ________________________________ > > > > > -- > Unpaid intern in BillsBasement at noware dot com > > > > > ________________________________ > Notice: This UI Health Care e-mail (including attachments) is covered by > the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is > confidential and may be legally privileged. If you are not the intended > recipient, you are hereby notified that any retention, dissemination, > distribution, or copying of this communication is strictly prohibited. > Please reply to the sender that you have received the message in error, then > delete it. Thank you. > ________________________________ > > > > > -- > Unpaid intern in BillsBasement at noware dot com > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > > > > > -- > +1 919 869 8849 > > > > > -- > Unpaid intern in BillsBasement at noware dot com > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > _______________________________________________ > Community mailing list > Community at itk.org > http://public.kitware.com/mailman/listinfo/community > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-developers > > > From chuck.atkins at kitware.com Thu Apr 23 16:58:20 2015 From: chuck.atkins at kitware.com (Chuck Atkins) Date: Thu, 23 Apr 2015 20:58:20 -0000 Subject: [ITK-dev] [ITK] New Highly Parallel Build System, the POWER8 In-Reply-To: References: Message-ID: (re-sent for the rest of the dev list) Hi Bradley, It's pretty fast. The interesting numbers are for 20, 40, 80, and 160. That aligns with 1:1, 2:1, 4:1, and 8:1 threads to core ratio. Starting from the already configured ITKLinuxPOWER8 currently being built, I did a ninja clean and then "time ninja -jN". Watching the cpu load for 20, 40, and 80 cores though, I see a fair amount of both process migration and unbalanced thread distribution, i.e. for -j20 I'll often see 2 cores with 6 or 8 threads and the rest with only 1 or 2. So in addition to the -jN settings, I also ran 20, 40, and 80 threads using numactl with fixed binding to physical CPU cores to evenly distribute the threads across cores and prevent thread migration. See timings below in seconds: ThreadsRealUserSysTotal CPU Time201037.09719866.685429.79620296.481*(Numa Bind) 20**915.910**16290.589**319.017**16609.606*40713.77226953.663556.960 27510.623(Numa Bind) 40641.92422442.685432.37922875.06480588.35740970.439 822.94441793.383*(Numa Bind) 80**538.801**35366.297**637.922**36004.219*160 572.49262542.9011289.86463832.765(Numa Bind) 160549.74261864.6661242.975 63107.641 So it seems like core binding gives us an approximate 10% performance increase for all thread configurations. And while clearly the core-locked 4:1 gave us the best time, looking at the total CPU time (user+sys) the 1:1 looks to be the most efficient for actual cycles used. It's interesting to watch how the whole system gets used up for most of the build but everything gets periodically gated on a handful of linker processes. And of course, it's always cool to see a screen cap of htop with a whole boat load of cores at 100% - Chuck On Thu, Apr 23, 2015 at 10:01 AM, Bradley Lowekamp wrote: > Matt, > > I'd love to explore the build performance of this system. > > Any chance you could run clean builds of ITK on this system with > 20,40,60,80,100,120,140 and 160 processes and record the timings? > > I am very curious how this unique systems scales with multiple heavy > weight processes, as it's design appears to be uniquely suitable to lighter > weight multi-threading. > > Thanks, > Brad > > On Apr 22, 2015, at 11:51 PM, Matt McCormick > wrote: > > > Hi folks, > > > > With thanks to Chuck Atkins and FSF France, we have a new build on the > > dashboard [1] for the IBM POWER8 [2] system. This is a PowerPC64 > > system with 20 cores and 8 threads per core -- a great system where we > > can test and improve ITK parallel computing performance! > > > > > > To generate a test build on Gerrit, add > > > > request build: power8 > > > > in a review's comments. > > > > > > There are currently some build warnings and test failures that should > > be addressed before we will be able to use the system effectively. Any > > help here is appreciated. > > > > Thanks, > > Matt > > > > > > [1] > https://open.cdash.org/index.php?project=Insight&date=2015-04-22&filtercount=1&showfilters=1&field1=site/string&compare1=63&value1=gcc112 > > > > [2] https://en.wikipedia.org/wiki/POWER8 > > _______________________________________________ > > Powered by www.kitware.com > > > > Visit other Kitware open-source projects at > > http://www.kitware.com/opensource/opensource.html > > > > Kitware offers ITK Training Courses, for more information visit: > > http://kitware.com/products/protraining.php > > > > Please keep messages on-topic and check the ITK FAQ at: > > http://www.itk.org/Wiki/ITK_FAQ > > > > Follow this link to subscribe/unsubscribe: > > http://public.kitware.com/mailman/listinfo/insight-developers > > _______________________________________________ > > Community mailing list > > Community at itk.org > > http://public.kitware.com/mailman/listinfo/community > > -------------- next part -------------- An HTML attachment was scrubbed... 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