[Insight-developers] [Insight-users] [ANNOUNCE] ITK 4.4.0 has been released!
Bill Lorensen
bill.lorensen at gmail.com
Wed Jul 10 13:16:01 EDT 2013
When you specify the file, you should provide the full path to the file.
The error says the file cannot be opened:
full16_100um_2009b_sym.mnc
On Wed, Jul 10, 2013 at 1:07 PM, Panagiotis Foteinos <
panagiotis.foteinos at gmail.com> wrote:
> Greetings.
>
> Glad to see that MINC is supported.
>
>
> So, I enblabled MINC support and everything compiled nicely. Attempting to
> read, however, a *.mnc file, yielded the following error:
>
>
> ********************
> /home/pfoteino/local/bin/itk-4.4.0-bin/release/Modules/ThirdParty/MINC/ITKMINC2_ExternalProject/libsrc2/volume.c:142
> (from MINC2): Unable to open file 'full16_100um_2009b_sym.mnc'
> ExceptionObject caught!
>
> itk::ExceptionObject (0x1fc2440)
> Location: "unknown"
> File:
> /home/pfoteino/local/src/ITK-4.4.0/Modules/IO/ImageBase/src/itkImageIOBase.cxx
> Line: 366
> Description: itk::ERROR: MINCImageIO(0x1fc0cd0): Unknown component type: 0
> ********************
>
> The MINC image I used was taken from the BigBrain project.
>
> Any suggestions?
>
>
> Best Regards,
> Panagiotis Foteinos
>
>
> On Mon, Jun 3, 2013 at 5:06 PM, Matt McCormick <matt.mccormick at kitware.com
> > wrote:
>
>> The InsightToolkit (ITK) 4.4.0 has been released!
>>
>> The 4.4 release is a major milestone that marks the hard work of many
>> outstanding community members.
>>
>> Links to the Sourceforge.net tarballs can be found on the download page:
>>
>> http://www.itk.org/ITK/resources/software.html
>>
>>
>> We will discuss what is new in 4.4.0 on Tuesday, June 11 at 3PM
>> Eastern Time (GMT -5). To take part, join the “ITK BarCamp”
>> GooglePlus Community, and join the “What’s New in Release 4.4.0”
>> Event. A link to the YouTube live stream of the event will also be
>> posted at
>>
>> http://www.itk.org/ITK/resources/webinars.html
>>
>>
>> In summary:
>>
>> We are excited to announce two new ImageIO modules available in the
>> main repository. The MINC ImageIO module provides a bridge to the
>> MINC file format, a powerful medical imaging format used by the MINC
>> library, another open source library with many features similar to
>> ITK. The new MINC module, which has Image IO and Transform IO
>> capabilities, is considered experimental and must be enabled by
>> turning Module_ITKIOMINC ON in CMake’s configuration. This will
>> automatically build the MINC library, which is now available on Mac,
>> Linux, and Windows. The HDF5-based MINC2 file format is supported,
>> but support for the NetCDF-based MINC1 file format is not supported
>> because NetCDF is not distributed with ITK.
>>
>> Another new ImageIO module that expands the reach of ITK is the SCIFIO
>> module. SCIFIO is a refactoring of the Bio-Formats library. This
>> module provides access to a wide range of file formats encountered in
>> life sciences/microscopy environments. This experimental feature is
>> available a Remote module; to enable it, set the Fetch_SCIFIO CMake
>> variable to ON. Many improvements and fixes are ongoing for this
>> module; Git master is recommended for those interested in this module.
>>
>> A number of improvements were also made to DCMTK ImageIO, but this
>> module remains experimental on disabled by default. To try DCMTK
>> ImageIO support, turn the CMake option Module_ITKIODCMTK ON. For Unix
>> platforms, the supporting DCMTK library will automatically be built as
>> a CMake ExternalProject. On Windows, the DCMTK library must be built
>> independently of the ITK build system. Then, specify the location to
>> the external build after setting the CMake option ITK_USE_SYSTEM_DCMTK
>> ON.
>>
>> A number of performance improvements were made to QuadEdgeMesh
>> processing and memory copy functions. A new ImageScanlineIterator is
>> available. This iterator can be used in many of the cases where an
>> ImageRegionIterator is applied, but it has better performance.
>>
>> The approach to split image regions for parallel processing is no
>> longer hard coded to make multiple options available.
>>
>> An API design change was started to improve the implied functionality
>> of the GetObject methods. The non-const “GetObjectMacro” has been
>> replaced with a “GetModifiableObjectMacro” that will result in a
>> GetModifiableXXX method instead of a GetXXX method. This makes the
>> non-const nature of the method and the circumvention of pipeline
>> update semantics explicit for both the code author and those reading
>> the class API. This was implemented in a backwards compatible way,
>> and it will only be enforced if ITK_FUTURE_LEGACY_REMOVE is defined.
>>
>> Support for the Google Double Conversion library was added to improve
>> the reading and writing of double values as ASCII text with the
>> intention to improve the precision of the text transform file format’s
>> serialization.
>>
>> It is now easier to identify filter inputs by both a string name or an
>> integer index. The internal methods to store and retrieve inputs by
>> either string or index was correspondingly refactored, and performance
>> was also improved.
>>
>> JPEG ImageIO now writes and reads image spacing in a manner similar to
>> the TIFF ImageIO.
>>
>> An extensive amount of code cruft was removed and coding style was
>> made more consistent; ITK gets more stylish and classy with every
>> release!
>>
>> The ExternalData method to store large testing data outside of the Git
>> repository is now in upstream CMake 2.8.11. Our internal version has
>> been updated to the improved version in CMake.
>>
>> The minimum CMake required version was bumped to 2.8.8 on Windows and
>> 2.8.5 otherwise. This may be increased even higher in the near future
>> to ensure all CMake features utilized operate correctly.
>>
>> Known assertion failures occur when compiled under Visual Studio in
>> the Debug configuration. This will be fixed in 4.4.1. If this has a
>> significant negative impact on your work, please consider contributing
>> a Nightly dashboard build under this configuration. As previously
>> scheduled, Visual Studio 2005 is no longer be supported.
>>
>> Support for building against system third party libraries continues to
>> improve. Further improvements are expected for version 4.5.
>>
>> All tests are now passing again on the Nightly big-endian dashboard
>> system.
>>
>> InsightApplications (ITKApps) has seen fixes in the FLTK superbuild
>> and the TCL wrapped applications.
>>
>>
>>
>> Changes in ITK from v4.3.0 to v4.4.0 from the Git log:
>>
>> Ali Ghayoor (7):
>> ENH: Get the internal transforms of SyN registration filter
>> COMP: Fix all valid cppcheck warnings in "Module/Filtering"
>> directory
>> COMP: Fix all valid cppcheck warnings in "Module/Core" directory
>> COMP: Fix all valid cppcheck warnings in "Module/Segmentation"
>> directory
>> COMP: Fix all valid cppcheck warnings in "Module/Registration"
>> directory
>> COMP: Fix all valid cppcheck warnings in ITK (last patch)
>> COMP: Fix all valid cppcheck warnings in "ITK/Module" directory
>>
>> Arnaud Gelas (4):
>> PERF: improve performance of couple of methods of
>> itk::QuadEdgeMesh
>> PERF: couple of speed up improvements for QuadEdgeMesh processing
>> PERF: avoid doing GetPoint and SetPoint for the same point
>> ENH: Simplify template parameters in itk::PointsLocator
>>
>> Bill Lorensen (20):
>> ENH: Prevent duplicate loading of dynamic libraries
>> COMP: Fix compile error in PhilipsRECImageIO
>> COMP: Fix compile error in PhilipsRECImageIO
>> BUG: Memory leak after failed RegisterFactory
>> BUG: Warn on directories
>> ENH: Refactor DoubleToString into NumberToString
>> DOC: Escape hash in comment
>> STYLE: Apply kwstyle to Modules/Core tests
>> STYLE: Apply kwstyle to Modules/Filtering tests
>> STYLE: Apply kwstyle to Modules/Segmentation tests
>> STYLE: Apply kwstyle to Modules/IO tests
>> STYLE: Apply kwstyle to Modules/Numerics tests
>> STYLE: Apply kwstyle to Modules/Registration tests
>> STYLE: Apply kwstyle to some tests
>> BUG: Memory leak after failed RegisterFactory
>> COMP: Remove copy_n wrapper for standard std::copy
>> COMP: Make the test stable by removing random source
>> COMP: More baselines
>> COMP: Another baseline
>> COMP: Missing return error after exception
>>
>> Brad King (14):
>> BUG: ExternalData: Do not match directory names when resolving
>> DATA{}
>> STYLE: ExternalData: Cleanup stray TODO and typo in comments
>> STYLE: ExternalData: Remove unused private interface
>> ENH: ExternalData: Improve series matching using an explicit
>> syntax
>> ENH: ExternalData: Allow ()-groups in series match regex
>> ENH: ExternalData: Allow DATA{} syntax to reference directories
>> ENH: Configure new ExternalData series parsing for ITK baselines
>> BUG: ExternalData: Collapse ../ components in DATA{} paths
>> BUG: Fix "git gerrit-push" for content links with spaces
>> STYLE: Add detail to the vxl update instructions
>> STYLE: Add more detail to the vxl update instructions
>> ENH: ExternalData: Partly generalize hash algo/ext handling
>> ENH: ExternalData: Attach download rules to content links in IDEs
>> ENH: ExternalData: Preserve escaped semicolons during argument
>> expansion
>>
>> Bradley Lowekamp (78):
>> STYLE: Use ITK_ prefix for FFTW cmake variables and defines
>> BUG: Change default boundary condition to ZeroFlux
>> ENH: wrapping itkImageSeriesWriter
>> BUG: incorrect CMake variable for system jpeg include
>> DOC: Correct description of Bitwise binary filters
>> BUG: incorrect CMake variable for system jpeg include
>> COMP: GetTimeVaryingVelocityField methods did not compile
>> ENH: Creating templateless region splitter classes
>> ENH: Adding image region splitter for separable filtering
>> PERF: Do not spawn threads that will not be used.
>> ENH: ImageIO's now use ImageRegionSplitter base
>> COMP: Specify export for Specialized Array output operators
>> ENH: making old ImageRegionSplitter compatible with new splitter
>> BUG: initials Direction IVAR
>> STYLE: never a space before;
>> COMP: Address unused parameter warning in GPU code
>> BUG: Do not create static initialized ITK objects
>> ENH: Converted Multidimensional splitter to new base class
>> ENH: moving old ImageRegionSplitter to Deprecated Module
>> BUG: Only thread 0 should report progress.
>> PERF: Use std::fill for image filling
>> BUG: Only thread 0 should report progress in LabelMapFilters
>> COMP: Adding missing header
>> BUG: Using CMake variable in external builds with autoconf
>> environment
>> BUG: initialize InverseCovariance size with degenerate matrix
>> ENH: Adding numeric_traits specializations for "long long"
>> ENH: instantiate vnl types with "long long" on all platforms
>> Revert "ENH: Use named inputs in BinaryReconstruction filters."
>> BUG: initialize InverseCovariance size with degenerate matrix
>> BUG: Using CMake variable in external builds with autoconf
>> environment
>> COMP: Address unused parameter warning in GPU code
>> BUG: Only thread 0 should report progress in LabelMapFilters
>> BUG: Only thread 0 should report progress.
>> COMP: Adding missing header
>> ENH: Adding support for instantiating long long pixel types
>> BUG: VerifyPreconditions checks required named inputs
>> PERF: Adding performance oriented ScanlineIterator
>> COMP: Remove copy_n wrapper for standard std::copy
>> COMP: Missing ProgressReporter header
>> COMP: Suppress linker warning from fftw external project
>> COMP: Add missing ImageRegionIterator header in test
>> BUG: Don't allocate empty names in Get I/O Names methods
>> COMP: Make GPUFunctorBase destructor virtual
>> PERF: Changing filters to use ImageScanlineInterator
>> COMP: GCC_XML external project does not use BUILD_EXAMPLES
>> BUG: Scanline iterator in STAPLE filter not advanced to next line
>> PERF: Use ImageScanlineIterator in ImageAlgorithm::Copy
>> PERF: Use iterators into name map for index inputs
>> ENH: index can be associated with required input
>> PERF: Add global variable of index names in ProcessObject
>> COMP: fix unused result warning in ProcessObject
>> ENH: Remove names inputs specialized comparison
>> DOC: Updated input methods doxygen
>> PERF: Use ImageAlgorithm::Copy in JoinSeries filter
>> PERF: Change default index i/o prefix to just "_"
>> PERF: Use ImageAlgorithm::Copy in CastImageFilter
>> COMP: Fix failing implicit conversion from NULL
>> BUG: restore gnu aligned attribute
>> PERF: ImageAlgorithm::copy to use std::copy for conversion
>> PERF: Store indexed outputs in array for constant time access
>> COMP: GCC_XML compilation error with type_traits
>> BUG: Add unsigned int concept check to LabelVoting filter
>> COMP: Disable conversion warning for std::copy in ImageAlgorithm
>> BUG: Use correct types for TIFF Tags and buff math
>> BUG: Use local var for TIFF va_list parameter
>> BUG: Use correct bytes for BigEndian magic number
>> COMP: Fix int to char narrowing error and warning
>> COMP: Fix int to char narrowing error and warning
>> COMP: Fix scanf conversion specification to %u
>> COMP: Fix scanf conversion specification for id types
>> BUG: Remove extraneous print statement in tiffio
>> BUG: Incorrect va_arg type used in TIFF and LSM
>> BUG: JPEG2000 bool type in C is now unsigned char
>> BUG: add a test to demonstrate ThreadedIteratorPartitioner bug
>> BUG: Fix written other magic number in FreeSurferBinaryMeshIO
>> COMP: Fix assert in LSM, = in err of ==
>> BUG: IteratorPartitioner extra thread don't advance
>> BUG: C++ bool is 4 bytes on osx ppc
>>
>> Brian Helba (11):
>> STYLE: Ensure documentation \author tags are parsed
>> STYLE: Remove unnecessary overloads in favor of implicit
>> conversion
>> PERF: Replace deep copy with const const signature
>> ENH: Re-enable LoadPrivateTags option in GDCMImageIO
>> STYLE: Slightly refactor ImageFileWriter::Write to simplify logic
>> ENH: Always enable Get*FromTag methods in GDCMImageIO
>> DOC: Fix misspelling in MorphologyImageFilter
>> DOC: Fix misspelling in ObjectMorphologyImageFilter
>> STYLE: Remove unnecessary function call in GDCMImageIO
>> STYLE: Remove calls to deprecated functionality from DICOM
>> Examples / Tests
>> ENH: Allow Get*FromTag to accept uppercase hex
>>
>> Cory Quammen (1):
>> COMP: Bumped up minimum required CMake version
>>
>> Cyrille Faucheux (2):
>> ENH: allow the ClampImageFilter to use user-defined bounds
>> (#3016).
>> ENH: Move the ClampImageFilter to the ImageIntensity module
>> (#3016).
>>
>> David Cole (4):
>> BUG: Avoid using def file when BUILD_SHARED_LIBS is off
>> BUG: Do not undefine _WIN32_WINNT
>> BUG: Avoid using def file when BUILD_SHARED_LIBS is off
>> BUG: Do not undefine _WIN32_WINNT
>>
>> David Fuentes (2):
>> ENH: Allow block matching on diff size images
>> ENH: wrapping itkMaskFeaturePointSelectionFilter
>> itkBlockMatchingImageFilter
>>
>> Dirk Padfield (6):
>> BUG: CSVFileReader was reading all values as NaN
>> DOC: Made AnisotropicDiffusion documentation consistent with code
>> ENH: Enable MetaIO to read filenames with spaces using regex
>> BUG: CSVFileReader was reading all values as NaN
>> ENH: Added m_RequiredFractionOfOverlappingPixels to MaskedFFTNCC
>> BUG: SignedMaurerDistanceMap in 4D
>>
>> Google double-conversion Maintainers (1):
>> Google double-conversion (reduced)
>>
>> Hans Johnson (21):
>> COMP: Remove unnecessary BORLAND code
>> COMP: Make type conversions explicit/consistent
>> PERF: Optimize loop index computations
>> COMP: Remove unnecessary BORLAND code
>> COMP: Incomplete variable name change.
>> COMP: Incorrect warning presented for cppcheck
>> STYLE: The FFTW libs should be co-located with ITK
>> COMP: Fix robustness of DCMTK internal builds
>> ENH: Get function accessible from const objects
>> COMP: Missing patch for ITK_FUTURE_LEGACY_REMOVE
>> STYLE: Reduce redundant code identified by cpd
>> BUG: Return a modifiable object or provide const
>> STYLE: Improve SoftwareGuide documentation
>> COMP: Type mis-match for comparison operator
>> STYLE: Enforce using ITK macros when available
>> COMP: Type mis-match for comparison operator
>> BUG: ITK_FUTURE_LEGACY_REMOVE must cmake configured
>> BUG: Expose BSplineInterpolateImageFunction test
>> COMP: Linkage ITK_ABI_EXPORT to ITKCommon_EXPORT
>> BUG: itk_tiff.h should not be in itkTIFFImageIO.h
>> DOC: Fix line length issues for the SoftwareGuide
>>
>> Ho Cheung (7):
>> BUG: GradientVectorFlow should calculate timestep based on image
>> dimension
>> STYLE: GradientVectorFlow - Add const correctness
>> STYLE: GradientVectorFlow
>> PERF: GradientVectorFlow - Remove redundant initializations
>> BUG: itkPolyLineParametricPath infinite loop for degenerate paths
>> BUG: Fix ITK Path test failures
>> BUG: ITK unable to detect number of threads under Unix in recent
>> glibc.
>>
>> ITK Migration V4 (4):
>> DOC: Modify ContourMeanDistanceImageFilter comments.
>> DOC: Modify MattesMutualInformationImageToImageMetric comments.
>> DOC: Modify MaskImageFilter comments.
>> DOC: Modify BSplineTransformInitializer comments.
>>
>> Jan Margeta (1):
>> COMP: Added missing header <functional> in
>> itkAnchorCloseImageFilter.h
>>
>> Julien Finet (2):
>> ENH: Add unit test to itkThresholdImageFilterTest
>> ENH: Add MaskingValue to MaskImageFilter
>>
>> Julien Malik (2):
>> BUG: Remove itkLoad definition in JPEG2000ImageIOFactory
>> ENH: Add missing NumericTraits for complex
>>
>> Julien Michel (2):
>> BUG: Fix InverseDisplacementFieldImageFilter bug
>> BUG: Fix InverseDisplacementFieldImageFilter bug
>>
>> Kent Williams (21):
>> COMP: Turn on -fpic in options for DCMTK External Project
>> BUG: using InputPixelType to hold label count can overflow.
>> COMP: Update DCMTK version to incorporate new fixes.
>> COMP: Use portable method to find source dir & find DCMTK headers
>> COMP: Start using ITKConsortium github to retrieve DCMTK.
>> BUG: Regressions with respect to building DCMTK
>> COMP: Added patch from Dirk Padfield
>> ENH: use find_package(DCMTK NO_MODULE)
>> ENH: Add double-conversion library for precise Float output
>> COMP: replace in-line access methods with itk Macros
>> COMP: The install path for DoubleConversion lib was wrong.
>> COMP: removed warnings on Windows due to generic vs excp obj
>> throw.
>> COMP: check for this == &rhs as much as possible.
>> COMP: Replace memcpy with std::copy in ImportImageContainer.
>> COMP: Replace memcpy calls with std::copy
>> COMP: Further changes to the use of std::copy_n
>> COMP: Add preprocessor symbols to double-conversion for OS X PPC
>> COMP: Add DoubleConversion merge from upstream documentation
>> BUG: Return of NaN by DiffusionTensor3D::GetFractionalAnisotropy
>> BUG: Dicom method for Dir Cosines made non-orthogonal directions
>> COMP: Install openjpgDllConfig.h
>>
>> Kris Zygmunt (1):
>> PERF: Provide better default config for patch-based denoiser
>>
>> Luis Ibanez (1):
>> ENH: Maurer for Danielsson in Surface Distance.
>>
>> Manuel Grizonnet (4):
>> BUG: Inconsistency detected by ld.so due to static const string
>> BUG: Inconsistency detected by ld.so due to static const string
>> BUG: Inconsistency detected by ld.so due to static const string
>> BUG: Inconsistency detected by ld.so due to static const string
>>
>> Marco Feuerstein (1):
>> ENH: JPEG IO now writes and reads spacing, similar to the TIFF IO
>> (ITK-3023)
>>
>> Marius Staring (3):
>> ENH: expose parameter in Bilateral filter
>> PERF: Replace fill and copy with std alternatives
>> BUG: B-spline interpolator should use direction
>>
>> Mark Hiner (1):
>> ENH: Add SCIFIOImageIO.
>>
>> Matthew McCormick (47):
>> COMP: Fix wrapping configuration warnings about itkMeshBase, etc.
>> COMP: Fix HDF5 unused function for long long on Unix.
>> ENH: Bump CMake version numbers to 4.4.0.
>> BUG: Remove unused metric test content link.
>> COMP: Add DLL to PATH for Python tests on Visual Studio.
>> BUG: Do not nullify the DCMTK ExternalProject UPDATE_COMMAND.
>> BUG: Fix DCMTK lib_prefix identification.
>> COMP: Fix HDF5 unused function for long long on Unix.
>> BUG: Remove unused metric test content link.
>> COMP: Add DLL to PATH for Python tests on Visual Studio.
>> ENH: Bump CMakeLists.txt ITK version to 4.3.1.
>> STYLE: Fix errors detected by KWStyleCodeTest.
>> COMP: VectorIndexSelectionCastImageFilter extra itk namespace.
>> STYLE: Fix alignment in itkMask{Image,Negated}ImageFilter.h
>> ENH: Doxygen configuration update to 1.8.3.1.
>> BUG: Fix FFTW install paths in ITKConfig.cmake (ITK-2995).
>> DOC: Doxygen detection of DirectionTolerance as private.
>> ENH: Get Direction and CoordinateTolerance are const methods.
>> BUG: Add missing header to the third party TIFF install.
>> COMP: More fixes to mesh wrapping warnings.
>> BUG: Temporarily disable Python utility tests.
>> COMP: Avoid explicit instantiation and specialization for Array.
>> ENH: Add utility script to create JRE tarballs.
>> ENH: Use named inputs in BinaryReconstruction filters.
>> STYLE: Remove redundant itk namespace.
>> DOC: CreateTestDriver srcs should have the .cxx extension.
>> COMP: Must reinterpret the pointers to match
>> COMP: Fix project linking against ITK that does not use VtkGlue.
>> COMP: Fix project linking against ITK that does not use VtkGlue.
>> BUG: Fix FFTW install paths in ITKConfig.cmake (ITK-2995).
>> ENH: Bump version in CMakeLists.txt to 4.3.2.
>> DOC: Doxygen expansion of itkGetModifiableObjectMacro.
>> ENH: Remove unused wrapping code. ITK-3032.
>> ENH: Use named inputs in BinaryReconstruction filters.
>> COMP: Distance maps filters cannot wrap 1D.
>> DOC: Remove reference to MeanDistanceImageFilter.
>> STYLE: Fix KWStyle errors.
>> STYLE: Remove entries from the old MINC2ImageIO.
>> BUG: Remove MINCIO from the default registered modules.
>> BUG: Add EXCLUDE_FROM_ALL to ThirdParty/MINC.
>> BUG: Include SCIFIO in the auto-registered factories if the module
>> is enabled.
>> BUG: Visual Studio itkClampImageFilterTest failures.
>> STYLE: itkClampImageFilter.hxx in the wrong module.
>> COMP: Add _CRT_NO_SECURE_WARNINGS when building GCCXML.
>> COMP: Prevent ITK_USE_64BITS_IDS with Wrapping on Windows.
>> STYLE: Too many blank lines in itkCastImageFilterTest.cxx.
>> COMP: Bump MINC third party to fix warnings.
>>
>> Nick Tustison (4):
>> ENH: Adding masking capabilities with confidence mask option.
>> BUG: Masks need to be warped.
>> ENH: Permitting access to shrinking per dimension.
>> BUG: Valgrind error.
>>
>> Nicolas Rey (1):
>> STYLE: Minor style fixes
>>
>> Paul Novotny (3):
>> COMP: Fix TIFF on big endian systems
>> COMP: Build fails with ITK_USE_SYSTEM_TIFF
>> COMP: Fix TIFF on big endian systems
>>
>> Prathamesh Kulkarni (1):
>> COMP: QuickViewTest new baseline.
>>
>> Sean McBride (4):
>> STYLE: fixed minor spelling: XCode -> Xcode
>> COMP: fixed clang warning about NULL to bool conversion
>> BUG: Handle missing Analyze 7.5 flipped directions
>> COMP: Handle missing Analyze 7.5 flipped directions
>>
>> Tim Allman (3):
>> DOC: Modify BSplineTransform comments.
>> DOC: Modify JointHistogramMutualInformationImageToImageMetricv4
>> comments.
>> DOC: Modify JointHistogramMutualInformationImageToImageMetricv4
>> comments.
>>
>> Tom Vercauteren (2):
>> COMP: GPUPDEDeformableRegistrationFilter.cl fails to "compile".
>> COMP: GPUPDEDeformableRegistrationFilter.cl fails to "compile".
>>
>> Vladimir S. FONOV (2):
>> ENH: Adding libminc and updating MINC IO support.
>> BUG: Making 2D Minc IO work properly
>>
>> Xiaoxiao Liu (2):
>> ENH: Sync python scripts with python3.
>> ENH: Sync python scripts with python3.
>>
>> Yan Xu (1):
>> COMP: static cast unsigned int to int
>>
>>
>>
>>
>> Changes in ITKapps from v4.3.0-apps to v4.4.0-apps:
>>
>> Bill Lorensen (3):
>> COMP: VTK6 API change
>> ENH: Add TCL Wrapped examples
>> BUG: Missing includes for ITK4.4
>>
>> Hans Johnson (1):
>> COMP: Mac 10.8 fixes were incorporated in FLTK
>>
>> Jamie Snape (1):
>> BUG: Propagate build, linker, and OSX settings to external
>> projects
>>
>> Matt McCormick (6):
>> COMP: Re-add the FLTK patch for some Macs.
>> BUG: ITK External build only depends on VTK if being built.
>> COMP: Update FLTK SVN configuration.
>> ENH: Bump VTK ExternalProject to 5.10.1.
>> COMP: Use FLTK zip file stored on Midas3.
>> ENH: Bump ITK superbuild version to 4.4.0.
>>
>> Roland Kwitt (1):
>> COMP: Shadowing warning in GLSliceView.h
>>
>> Stephen R. Aylward (1):
>> COMP: Fix FLTK build error on Mac/Clang.
>>
>> Xiaoxiao Liu (1):
>> ENH: Print out accurate image IO error message.
>>
>>
>>
>> Changes from v4.3.0 to v4.4.0 from the Jira Issue tracker:
>>
>> [ITK-3002] - Make itkGetObjectMacro issue compile time warnings
>> [ITK-3003] - Add itkGetObjectMacro to the ITK_LEGACY_REMOVE option
>> [ITK-3085] - itkBSplineExponentialImageRegistrationTest Timeout on
>> RogueResearch11
>> [ITK-3086] - QuickViewTest test failure on farsight-mint
>> [ITK-3087] - itkLargeMetaImageWriteReadTest4 test failure on
>> dash5win7x64.kitware
>> [ITK-3088] - itkClampImageFilterTest test failure on lhcp-win7vm2.nlm
>> Win32-VS9-Release-Shared VS10-Release-Shared
>> [ITK-3089] - itkLSMImageIOTest on eldorado.kitware Ubuntu-g++-4.6.2-Debug
>> [ITK-3090] - itkTimeVaryingVelocityFieldImageRegistrationTest test
>> failure on eldorado.kitware Ubuntu-g++-4.6.2-Debug
>> [ITK-3091] - itkLSMImageIOTest test failure on RogueResearch9,
>> Mac10.6-gcc-rel-x86_64-static
>> [ITK-3093] - itkTIFFImageIOSpacing test failure on mini0.nlm,
>> MacOSX-cross-rosetta
>> [ITK-3094] - itkMeshFileReadWriteTest04 test failure on mini0.nlm,
>> MacOSX-cross-rosetta
>> [ITK-3095] - itkMeshFileReadWriteTest02 test failure on mini0.nlm,
>> MacOSX-cross-rosetta
>> [ITK-3096] - itkDiscreteGaussianImageFilterTest2 test failure on
>> mini0.nlm, MacOSX-cross-rosetta
>>
>> Bug
>> [ITK-2889] - Bug in BSplineInterpolateImageFunction ?
>> [ITK-2919] - Build with JOM fails to properly generate ITKTargets.cmake
>> [ITK-2943] - Add migration guide related to "itkTestMain.h"
>> [ITK-2975] - itk::CastImageFilter creates bad output
>> [ITK-2978] - ImageSeriesFileReader MetaDataDictionary Array
>> Incorrectly Handles Missing Fields
>> [ITK-2983] - ITKVtkGlue not adding VTK_LIBRARIES
>> [ITK-2988] - tiff name pollution
>> [ITK-2989] - A factor of 1/standard_deviation is missing from the
>> kernel pdf estimator in MutualInformationImageToImageMetric
>> [ITK-2992] - tif_config.h is not install
>> [ITK-2995] - Install tree ITKConfig.cmake is wrong for FFTW
>> [ITK-3004] - Direction cosine matrix generated using the images DICOM
>> tag "image orientation (patient)" or (0020,0037) is not necessarilly
>> orthogonal
>> [ITK-3009] - itk::InverseDisplacementFieldImageFilter does not work
>> properly
>> [ITK-3011] - Maurer for Danielsson in Surface Distance
>> [ITK-3012] - ld error on exit when using itkBinaryErodeImageFilter and
>> itkBinaryDilateImageFilter
>> [ITK-3015] - Modules/IO/PhillipsREC/src/itkPhilipsPar.cxx contains
>> nonsense code
>> [ITK-3017] - ITK_ABI_EXPORT is used directly when ITKCommon_EXPORT
>> should be used
>> [ITK-3020] - ImageRegistration2D bug
>> [ITK-3021] - itk::ImportImageContainer use of memcpy seen as harmful
>> [ITK-3028] - BUG: B-spline interpolator should use direction
>> [ITK-3064] - BSplineDeformableTransform writes out a warning every
>> time a point in an image is transformed, causes memory allocation
>> errors
>> [ITK-3065] - TestImportImageContainer cannot handle memory reallocation
>> [ITK-3066] - BSplineDeformableTransform::InsideValidRegion icm with
>> even spline orders and ITK_USE_CENTERED_PIXEL_COORDINATES_CONSISTENTLY
>> [ITK-3068] - Cannot resample a VectorImage
>> [ITK-3069] - itkMersenneTwisterRandomVariateGenerator is not thread safe
>> [ITK-3070] - IPLCommonImageIO fails to read GE Signa CT file series.
>> [ITK-3071] - PolyLineParametricPath converges too slow
>> [ITK-3072] - itkTransforms could supply a spatial Jacobian.
>> [ITK-3083] - Clean Dashboard for 4.4 release
>> [ITK-3118] - inconsistent behavior of all filters derived from
>> itk::BinaryFunctorImageFilter
>>
>> Improvement
>> [ITK-2896] - Add missing NumericTraits for complex
>> [ITK-2940] - MaskedFFTNormalizedCorrelationImageFilter should be
>> templated on MaskType
>> [ITK-2964] - CMake warnings about "Perhaps should you turn on more
>> WRAP_* options" not helpful.
>> [ITK-2977] - itkMatrix sometimes requires extra VNL includes, leading
>> to confusing linker errors
>> [ITK-2980] - STYLE: Make FEM Get/Set codes use itkMacros wherever possible
>> [ITK-2993] - Add Masking value to MaskImageFilter
>> [ITK-2996] - Improve speed bilateral filter (itk::BilateralImageFilter)
>> [ITK-3001] - itkGetObjectMacro pervasively hides the
>> itkGetConstObjectMacro
>> [ITK-3008] - Apply cppcheck to ITK
>> [ITK-3016] - Allow the ClampImageFilter to use user-defined bounds
>> [ITK-3073] - Const Correctness Warning
>>
>> New Feature
>> [ITK-2985] - Get the internal transforms of the
>> itkSyNImageRegistrationMethod
>> [ITK-3005] - Add ITK icon to ITK wiki, doc and examples
>> Task
>> [ITK-2560] - Remove ITK_TEMPLATE_TXX
>> [ITK-2979] - Fix doxygen documentation
>> [ITK-3032] - Duplicate Source Code Versions of itkImagetoVTKImageFilter
>>
>>
>>
>> Enjoy ITK!
>> _____________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Kitware offers ITK Training Courses, for more information visit:
>> http://www.kitware.com/products/protraining.php
>>
>> Please keep messages on-topic and check the ITK FAQ at:
>> http://www.itk.org/Wiki/ITK_FAQ
>>
>> Follow this link to subscribe/unsubscribe:
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>>
>
>
> _____________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.php
>
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
>
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--
Unpaid intern in BillsBasement at noware dot com
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