[Insight-developers] Tool for converting 2D images to 3D volume

[Williams, Norman K]

This is the website M. Fillard should have linked to
https://github.com/pfillard/utilities -- you need to use git, not SVN to
check out that repository.

It isn't a really complex program to write in ITK, though you'd have to
know ITK well enough to write it.

Basically, you just make a list of filenames in the format the
ImageSeriesReader is expecting, and then call the ImageSeriesReader. Then
fix up the orientation/origin/spacing to be what you think they should be,
and write the volume out in the format of your choice.

--
Kent Williams norman-k-williams at uiowa.edu






On 1/11/13 3:51 AM, "Kulplex" <kulplex at gmail.com> wrote:

>
>
>
>Hello everyone,
>
>I have been searching quite a bit and now I realized I should seek some
>support.
>My goal is to find a tool for converting 2D images (tiff, jpg or else) to
>a 3D volume (VTK supported format). I found quite some threads and also a
>guy posting what seemed to be exactly what I was looking for
>
>https://sites.google.com/site/pierrefillard/coding-blog/createa3dvolumefro
>mseveral2dimages
><https://sites.google.com/site/pierrefillard/coding-blog/createa3dvolumefr
>omseveral2dimages>. In fact, I was amazed and extremely happy; sadly, the
>SVN URL provided on the website doesn't work, for whatever reason.
>So now I am back from the start.
>
>I was wondering if someone of you had, or knew where to find, a program
>(console) that either gets a list of images or the folder they are in and
>creates a 3D volume out of it. The program presented in the link above
>was actually really cool, for the fact that
> it could also convert 3D images to 4D ones.
>
>Regards,
>
>N.



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