[Insight-developers] Possible issue with ITK dcmtk and Slicer dcmtk

Johnson, Hans J hans-johnson at uiowa.edu
Sat Nov 17 16:50:02 EST 2012


Bill,

Inside of slicer you will need to point ITK to use the external DCMTK
build.

USE_SYSTEM_DCMTK

Hans


On 11/17/12 10:28 AM, "Bill Lorensen" <bill.lorensen at gmail.com> wrote:

>Folks,
>
>I have not investigated this too much, but here it goes...
>
>I updated slicer 4 today and itkv4. I'm building Slicer against
>today's itkv4 master.
>
>The EMSegmentCommandLine program is segfaulting when exiting. I tried
>it with the --xml argument.
>
>gdb reports (some symbols are missing because my build is not all debug
>
>#0  0x0000000000000031 in ?? ()
>#1  0x00007fffed103079 in OFListBase::~OFListBase (this=0x7fffed51b930,
>    __in_chrg=<value optimized out>)
>    at
>/home/lorensen/Projects/Slicer4-Superbuild/DCMTK/ofstd/libsrc/oflist.cc:54
>#2  0x00007fffe1980fba in OFList<DcmCodecList*>::~OFList() ()
>   from
>/home/lorensen/Projects/Slicer4-Superbuild/ITKv4-build/Modules/ThirdParty/
>DCMTK/ITKDCMTK_ExtProject-build/lib/libdcmdata.so.3
>#3  0x00007fffd2649d3d in __cxa_finalize (d=0x7fffe1d0b2c0)
>    at cxa_finalize.c:56
>#4  0x00007fffe1978f36 in __do_global_dtors_aux ()
>   from
>/home/lorensen/Projects/Slicer4-Superbuild/ITKv4-build/Modules/ThirdParty/
>DCMTK/ITKDCMTK_ExtProject-build/lib/libdcmdata.so.3
>#5  0x0000000000000000 in ?? ()
>
>Looks to me like Slicer's Superbuild DCMTK is classing with ITK's
>DCMTK. As I said I have not investigated this very much.
>
>Bill



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