[Insight-developers] DCMTK Questions

Williams, Norman K norman-k-williams at uiowa.edu
Tue May 29 14:37:46 EDT 2012


The usual method of doing things would be

IF(ITK_USE_SYSTEM_DCMTK)
find_package(DCMTK REQUIRED)
# yadda yadda.
ENDIF()

This would fail if DCMTK_DIR is not defined -- assuming of course DCMTK
isn't installed in the standard paths.
--
Kent Williams norman-k-williams at uiowa.edu






On 5/29/12 1:34 PM, "Jean-Christophe Fillion-Robin"
<jchris.fillionr at kitware.com> wrote:

>
>On Tue, May 29, 2012 at 11:55 AM, Williams, Norman K
><norman-k-williams at uiowa.edu> wrote:
>
>
>Jean-Christophe, it seems like what you're saying is that you wish
>DCMTK_DIR, if defined, to in essence, force ITK_USE_SYSTEM_DCMTK.  That's
>fine, and looking how other external packages are dealt with -- FFTW being
>the prime example -- that's how it would work.
>
>
>
>If passing both -DITK_USE_SYSTEM_DCMTK:BOOL=ON and
>-DDCMTK_DIR:PATH=/path/to/my/dcmtk when configuring ITK works as
>expected, I guess that should be enough from Slicer perspective.
>
>Thanks
>Jc
>
>
>
>
>Bill, I think that the goal, as indicated by Terry Yu, is that GDCM will
>be deprecated, so the DCMTK reader will be the one true way to deal with
>DICOM.  This could be a problem for programs that have used GDCMImageIO
>explicitly -- or used GDCM calls directly, but I think most people were
>cured of that tendency when ITK went from GDCM1 to GDCM2, which broke
>anything that used GDCM in a non-trivial fashion.
>
>I think I see my way clear to make DCMTK work as well -- or probably
>better -- than GDCM as a DICOM reader.  I need to focus on that and
>produce a Gerrit patch.  There are a ton of peripheral issues around
>DICOM reading that will take longer to iron out.
>
>The fact of the matter is that DICOM is squirrelly enough to make it
>impossible to use transparently with the existing ImageIO framework.  For
>one thing, the ImageFileReader/Writer really don't want to deal with
>directories as image paths, so any program who wants to use ITK for Image
>IO has to have infrastructure around ImageIO to sniff for the DICOM case
>and do it differently than every other file format.
>
>Plus DICOM is potentially quite a lot more than just files in a file
>system, and ITK has never dealt with the rest of DICOM at all.  Slicer4
>has some support for network DICOM stuff, but they're using DCMTK directly
>to handle that case.
>
>On 5/29/12 10:28 AM, "Bill Lorensen" <bill.lorensen at gmail.com> wrote:
>
>>If you treat dcmtk as we treat vtk then you will not need a
>>ITK_USE_SYSTEM_DCMTK.
>
>
>
>
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