[Insight-developers] OS X 10.7.3 breaks kwsys

Thu Mar 22 09:49:29 EDT 2012

Yup. That's not gonna work... You'll need a newer CMake.

Apple changed the default location of Xcode.app to be in
"/Applications" instead of under "/Developer" -- they also completely
reorganized where the SDK folders are. Also: PackageMaker is not
installed by default, and you have to install the "Auxiliary Tools for
Xcode" and put PackageMaker in the "/Applications" directory in order
to build PackageMaker packages via CPack now.

The commits pointed to in that CMake bug report detail the changes
that were made to address this reorg.

You might be able to do a makefile based build with an earlier CMake
if you can set up the environment in just the right way, and then
point it to the correct SDK... but it'd be better to simply use a
nightly build of CMake until 2.8.8 is out.

HTH,
David

On Thu, Mar 22, 2012 at 9:42 AM, Bradley Lowekamp
<blowekamp at mail.nih.gov> wrote:
> $ xcodebuild -version
> Xcode 4.3.1
> Build version 4E1019
>
> $ cmake --version
> cmake version 2.8.7
>
> On Mar 22, 2012, at 9:36 AM, David Cole wrote:
>
> How about the output of "xcodebuild -version" ... ?
>
> With Xcode 4.3, you will need a VERY recent CMake to pick up this
> recent bug fix:
>
>  http://public.kitware.com/Bug/view.php?id=12621
>
> A nightly build of CMake dated March 16, 2012 or later should work.
> The fix will also be in the upcoming CMake 2.8.8 release. We should be
> doing rc1 for CMake 2.8.8 very soon now.
>
>
> Thanks,
> David
>
>
>
> On Thu, Mar 22, 2012 at 9:22 AM, Bradley Lowekamp
> <blowekamp at mail.nih.gov> wrote:
>
> *smacks head* I was on the wrong system.
>
>
> $ clang --version
>
> Apple clang version 3.1 (tags/Apple/clang-318.0.54) (based on LLVM 3.1svn)
>
> Target: x86_64-apple-darwin11.3.0
>
> Thread model: posix
>
>
> $ uname -a
>
> Darwin mini6 11.3.0 Darwin Kernel Version 11.3.0: Thu Jan 12 18:47:41 PST
>
> 2012; root:xnu-1699.24.23~1/RELEASE_X86_64 x86_64
>
>
>
> On Mar 22, 2012, at 9:14 AM, Johnson, Hans J wrote:
>
>
> Brad,
>
>
> I am getting a much different clang version on my 10.7.3 system:
>
>
> johnsonhj at neuron:~$ clang --version
>
> Apple clang version 3.0 (tags/Apple/clang-211.12) (based on LLVM 3.0svn)
>
> Target: x86_64-apple-darwin11.3.0
>
> Thread model: posix
>
> johnsonhj at neuron:~$ uname -a
>
>
> Darwin neuron.psychiatry.uiowa.edu 11.3.0 Darwin Kernel Version 11.3.0: Thu
>
> Jan 12 18:47:41 PST 2012; root:xnu-1699.24.23~1/RELEASE_X86_64 x86_64
>
> johnsonhj at neuron:~$
>
>
>
> Hans
>
> --
>
> Hans J. Johnson, Ph.D.
>
> hans-johnson at uiowa.edu
>
> Assistant Professor of Psychiatry
>
> University of Iowa Carver College of Medicine
>
> W278 GH, 200 Hawkins Drive
>
> Iowa City, Iowa 52242
>
> Phone:  319-353-8587
>
>
> From: Bradley Lowekamp <blowekamp at mail.nih.gov>
>
> Date: Thu, 22 Mar 2012 09:09:28 -0400
>
> To: Kent Williams <norman-k-williams at uiowa.edu>
>
> Cc: ITK <insight-developers at itk.org>
>
> Subject: Re: [Insight-developers] OS X 10.7.3 breaks kwsys
>
>
> Hello,
>
>
> I think I re-produced your problem trying to set up clang for SimpleITK:
>
>
> http://open.cdash.org/viewBuildError.php?buildid=2112999
>
>
> I just downloaded the latest XCode, and patched the system:
>
>
> $ clang --version
>
> Apple clang version 1.7 (tags/Apple/clang-77) (based on LLVM 2.9svn)
>
> Target: x86_64-apple-darwin10
>
> Thread model: posix
>
>
> Does ITK work mostly with this version of clang? Is this the version you are
>
> using, or some mac-ports like version?
>
>
> Thanks,
>
> Brad
>
>
> On Mar 13, 2012, at 11:59 AM, Williams, Norman K wrote:
>
>
> This is one of those 'oh great' moments. I updated my Mac to 10.7.3 and
>
> ITK and VTK compiles broke, with this error:
>
>
> In file included from
>
> /scratch/kent/ants/brainsia/build/ITKv4/Modules/ThirdParty/KWSys/src/KWSys/
>
> SystemTools.cxx:26:
>
> /scratch/kent/ants/brainsia/build/ITKv4-build/Modules/ThirdParty/KWSys/src/
>
> itksys/ios/sstream:176:29: error: cannot initialize a
>
>      parameter of type 'iostate' (aka 'std::_Ios_Iostate') with an lvalue
>
> of type 'int'
>
>    this->IStrStream::clear(flags);
>
>                            ^~~~~
>
> /usr/include/c++/4.2.1/bits/basic_ios.h:133:21: note: passing argument to
>
> parameter '__state' here
>
>      clear(iostate __state = goodbit);
>
>
> The problem is that the function signature for ios::clear changed between
>
> 10.7.2 and 10.7.3 -- and for some reason the compiler won't do the
>
> conversion between int and iostate.
>
>
> It's vexing to me because I can't imagine ever calling ios::clear() with
>
> an argument.  Clear is clear, right?
>
>
>
>
> --
>
> Kent Williams norman-k-williams at uiowa.edu
>
>
>
>
>
>
>
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> ========================================================
>
> Bradley Lowekamp
>
> Medical Science and Computing for
>
> Office of High Performance Computing and Communications
>
> National Library of Medicine
>
> blowekamp at mail.nih.gov
>
>
>
>
> _______________________________________________ Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
>
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>
> Training Courses, for more information visit:
>
> http://kitware.com/products/protraining.php Please keep messages on-topic
>
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> ________________________________
>
> Notice: This UI Health Care e-mail (including attachments) is covered by the
>
> Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential
>
> and may be legally privileged.  If you are not the intended recipient, you
>
> are hereby notified that any retention, dissemination, distribution, or
>
> copying of this communication is strictly prohibited.  Please reply to the
>
> sender that you have received the message in error, then delete it.  Thank
>
> you.
>
> ________________________________
>
>
>
> ========================================================
>
>
> Bradley Lowekamp
>
>
> Medical Science and Computing for
>
>
> Office of High Performance Computing and Communications
>
>
> National Library of Medicine
>
>
> blowekamp at mail.nih.gov
>
>
>
>
>
>
> _______________________________________________
>
> Powered by www.kitware.com
>
>
> Visit other Kitware open-source projects at
>
> http://www.kitware.com/opensource/opensource.html
>
>
> Kitware offers ITK Training Courses, for more information visit:
>
> http://kitware.com/products/protraining.php
>
>
> Please keep messages on-topic and check the ITK FAQ at:
>
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> ========================================================
>
> Bradley Lowekamp
>
> Medical Science and Computing for
>
> Office of High Performance Computing and Communications
>
> National Library of Medicine
>
> blowekamp at mail.nih.gov
>
>
>
>