[Insight-developers] itkMath doxygen missing?

[Matt McCormick]

Hi Arnaud,

Thanks for the tip.  I have installed gnuplot and verified that dot is
present.  I ran doxygen -u on Utilities/Doxygen/doxygen.config.in and
I am currently running an Experimental build.

Thanks,
Matt

On Fri, Jun 15, 2012 at 9:58 AM, Arnaud Gelas <arnaudgelas at gmail.com> wrote:
> Matt,
>
> In your submission, I found this:
>
>        -- Could NOT find Gnuplot (missing:  GNUPLOT_EXECUTABLE)
>
> Could you please install gnuplot (although it is not used when generating
> the documentation), can you also make sure dot is installed on your machine?
>
> Thanks
> Arnaud
>
>
> On 06/15/2012 03:49 PM, Matt McCormick wrote:
>>
>> On Fri, Jun 15, 2012 at 8:24 AM, Bradley Lowekamp
>> <blowekamp at mail.nih.gov>  wrote:
>>>
>>> Matt!
>>>
>>> Your system is reporting a build time of only 2 hours and 24 minuets!
>>> That
>>> must be some improvement to doxygen!
>>>
>>> http://open.cdash.org/buildSummary.php?buildid=2362979
>>
>> Fantastic!  It looks OK, but there is a problem with the inheritance
>> diagrams.  Perhaps dot is not being executed correctly.  I will follow
>> Arnaud's 'doxygen -u' suggestion...
>>
>> Thanks,
>> Matt
>>
>>
>>> I guess it should be checked to see if it actually produced the doxyen
>>> html
>>> before we celebrate a break through is doxyen performance...
>>>
>>> Brad
>>>
>>> On Jun 15, 2012, at 2:34 AM, Arnaud Gelas wrote:
>>>
>>> Brad,
>>>
>>> AFAIK doxygen is a single threaded process; however the generation of
>>> graphs is multithreaded (dot instances are created in parallel). With
>>> the current doxygen configuration file, all threads are meant to be used
>>> in this process (which occurs towards the end of the html generation).
>>>
>>> Note that having more CPUs significantly reduced the documentation
>>> generation. Also, I am not sure if there any speed improvement in the
>>> latest doxygen version (?)
>>>
>>> ---
>>>
>>> Matt,
>>>
>>> After upgrading doxygen, you should also upgrade the configuration file
>>> to take full benefit from new features (and potential enhancement); else
>>> default values are used.
>>>
>>> You only to run
>>>
>>>     doxygen -u<config_file>
>>>
>>>     see http://www.stack.nl/~dimitri/doxygen/doxygen_usage.html
>>>
>>> Each parameters are well documented in the configuration file, but you
>>> can also have a look at the following page:
>>>
>>>     http://www.stack.nl/~dimitri/doxygen/config.html
>>>
>>> Finally, once you upgrade the configuration file, feel free to add me as
>>> reviewer when you submit the patch on gerrit.
>>>
>>> Cheers,
>>> Arnaud
>>>
>>>
>>> ========================================================
>>>
>>> Bradley Lowekamp
>>>
>>> Medical Science and Computing for
>>>
>>> Office of High Performance Computing and Communications
>>>
>>> National Library of Medicine
>>>
>>> blowekamp at mail.nih.gov
>>>
>>>
>>>
>>>
>