[Insight-developers] Builds on Mac OS X are failing when linking libITK-Transform-4.0.1.dylib

Mon May 23 14:20:59 EDT 2011

 I have merged a fix to master lately:
http://review.source.kitware.com/#change,1698, in which
the ITK-ImageStatistics dependency is removed from ITK-Transform.

Is this relevant? Did you try cleaning up your build directory?
I think this change might require a fresh build directory.

On Mon, May 23, 2011 at 12:24 PM, Cory Quammen <cquammen at cs.unc.edu> wrote:

> Looks good.
>
> Will you submit a patch to gerrit?
>
> Thanks,
> Cory
>
> On Mon, May 23, 2011 at 12:23 PM, Alexandre GOUAILLARD
> <agouaillard at gmail.com> wrote:
> > works for me:
> >
> > diff --git a/Modules/Core/Transform/src/CMakeLists.txt
> b/Modules/Core/Transform/
> > index 52f1fc1..2ef25c1 100644
> > --- a/Modules/Core/Transform/src/CMakeLists.txt
> > +++ b/Modules/Core/Transform/src/CMakeLists.txt
> > @@ -13,5 +13,5 @@ set(ITK-Transform_SRC
> >   )
> >
> >  add_library(ITK-Transform ${ITK-Transform_SRC})
> > -target_link_libraries(ITK-Transform  ${ITK-ImageStatistics_LIBRARIES}
> itkhdf5 i
> > +target_link_libraries(ITK-Transform  ${ITK-Common_LIBRARIES}
> ${ITK-ImageStatist
> >  itk_module_target(ITK-Transform)
> >
> >
> >
> > see experimental:
> > http://www.cdash.org/CDash/viewTest.php?onlypassed&buildid=1158375
> >
> >
> >
> >
> >
> > On Tue, May 24, 2011 at 12:13 AM, Cory Quammen <cquammen at cs.unc.edu>
> wrote:
> >> Alex,
> >>
> >> I can confirm that the error occurs only when BUILD_SHARED is enabled.
> >> With verbose output, the linker command is:
> >>
> >> Linking CXX shared library ../../../../lib/libITK-Transform-4.0.dylib
> >> cd /Users/cquammen/dev/build/ITK-Modular/Modules/Core/Transform/src &&
> >> "/Applications/CMake 2.8-3.app/Contents/bin/cmake" -E
> >> cmake_link_script CMakeFiles/ITK-Transform.dir/link.txt --verbose=1
> >> /usr/bin/c++    -Wall -Wno-deprecated -msse2 -g -dynamiclib
> >> -headerpad_max_install_names   -compatibility_version 1.0.0
> >> -current_version 1.0.0 -o ../../../../lib/libITK-Transform-4.0.1.dylib
> >> -install_name
> /Users/cquammen/dev/build/ITK-Modular/lib/libITK-Transform-4.0.1.dylib
> >> CMakeFiles/ITK-Transform.dir/itkHDF5TransformIO.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkHDF5TransformIOFactory.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTxtTransformIO.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTxtTransformIOFactory.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTransformIOBase.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkMatlabTransformIO.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTransformFactoryBase.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTransformFileWriter.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTransformFileReader.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkMatlabTransformIOFactory.cxx.o
> >> CMakeFiles/ITK-Transform.dir/itkTransformIOFactory.cxx.o
> >> ../../../../lib/libitkhdf5-4.0.1.dylib
> >> ../../../../lib/libitkhdf5_cpp-4.0.1.dylib
> >> ../../../../lib/libitkhdf5-4.0.1.dylib -lm
> >> ../../../../lib/libitkzlib-4.0.1.dylib
> >>
> >> I'm currently trying out adding ITK-Common_LIBRARIES to the linker
> >> command and will keep you posted.
> >>
> >> Thanks,
> >> Cory
> >>
> >> On Mon, May 23, 2011 at 11:45 AM, Alexandre GOUAILLARD
> >> <agouaillard at gmail.com> wrote:
> >>> hi cory,
> >>>
> >>> It seems to happen only in dynamic libs. My first feeling was a mising
> >>> (explicit) libraries as mac wants all the libraries a target depends
> >>> on to be listed (not like linux which would accept the minimum set of
> >>> libs that would in term link against other dependencies).
> >>> Indeed adding ITK-Common_LIBRARIES to the the link list seems to do the
> trick.
> >>> I m making a full experimental and let you know.
> >>>
> >>> alex.
> >>>
> >>>
> >>> On Mon, May 23, 2011 at 10:29 PM, Alexandre GOUAILLARD
> >>> <agouaillard at gmail.com> wrote:
> >>>> yes, i m trying to debug that right now, have the same issue, and it
> >>>> appears on both gaethan's machine, and cosmo machine's in Boston.
> >>>>
> >>>> let me know if you find before me ;-)
> >>>>
> >>>> alex.
> >>>>
> >>>>
> >>>> On Mon, May 23, 2011 at 9:23 PM, Cory Quammen <cquammen at cs.unc.edu>
> wrote:
> >>>>> See, for example,
> http://www.cdash.org/CDash/viewBuildError.php?buildid=1155357
> >>>>>
> >>>>> --
> >>>>> Cory Quammen
> >>>>> Computer Integrated Systems for Microscopy and Manipulation (CISMM)
> >>>>> Department of Computer Science
> >>>>> University of North Carolina at Chapel Hill
> >>>>> http://www.cs.unc.edu/~cquammen
> >>>>> _______________________________________________
> >>>>> Powered by www.kitware.com
> >>>>>
> >>>>> Visit other Kitware open-source projects at
> >>>>> http://www.kitware.com/opensource/opensource.html
> >>>>>
> >>>>> Kitware offers ITK Training Courses, for more information visit:
> >>>>> http://kitware.com/products/protraining.html
> >>>>>
> >>>>> Please keep messages on-topic and check the ITK FAQ at:
> >>>>> http://www.itk.org/Wiki/ITK_FAQ
> >>>>>
> >>>>> Follow this link to subscribe/unsubscribe:
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> >>>>>
> >>>>
> >>>
> >>
> >>
> >>
> >> --
> >> Cory Quammen
> >> Computer Integrated Systems for Microscopy and Manipulation (CISMM)
> >> Department of Computer Science
> >> University of North Carolina at Chapel Hill
> >> http://www.cs.unc.edu/~cquammen
> >>
> >
>
>
>
> --
> Cory Quammen
> Computer Integrated Systems for Microscopy and Manipulation (CISMM)
> Department of Computer Science
> University of North Carolina at Chapel Hill
> http://www.cs.unc.edu/~cquammen
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
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>
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>
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-- 

---------------------------------------------
*Xiaoxiao Liu*, Ph.D.
R & D Engineer
Kitware Inc <http://www.kitware.com/>.
Clifton Park, NY
Phone: (518) 881-4924  or  (518) 371-3971 x124
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