[Insight-developers] SimpleITK - does testing work with R?

[Bradley Lowekamp]

Luis,

I just download and installed R. When I can build SimpleITK just fine when it's the only the R language enabled. However, when I perform the testing it appears that all the R tests are failing. With the following:

Running command: '/usr/bin/Rscript /scratch/blowekamp/build/SimpleITK-gcc/Testing/Unit/RTests/AddImageFilterTest.R 2d /nfs/Users/blowekamp/src/SimpleITK/Testing/Data/Input/STAPLE1.png /nfs/Users/blowekamp/src/SimpleITK/Testing/Data/Input/STAPLE2.png /scratch/blowekamp/build/SimpleITK-gcc/Testing/Temporary/R-Add-2d.nrrd '
104: Error in library(SimpleITK) : there is no package called 'SimpleITK'
104: Execution halted


There is quite a lengthy description of things here:
http://erie.nlm.nih.gov/~blowek1/SimpleITK/Wrapping.html

Do I need to do all that for testing? or is that more installation?

Additionally, there the R binding appear to generate "bin/libSimpleITK.so" this is conflicting with another language and is problematic with building multiple languages at the same time.

Any ideas how to get R testing?

Brad

========================================================
Bradley Lowekamp  
Lockheed Martin Contractor for
Office of High Performance Computing and Communications
National Library of Medicine 
blowekamp at mail.nih.gov


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