[Insight-developers] Getting BRAINS3 to build with ITK4

[Williams, Norman K]

I've not tracked down the problem, but with your latest changes, the
install is messed up:

CMake Error at Wrapping/WrapITK/cmake_install.cmake:33 (FILE):
  file cannot create directory: /lib/InsightToolkit/WrapITK/Configuration.
  Maybe need administrative privileges.
Call Stack (most recent call first):
  Wrapping/cmake_install.cmake:32 (INCLUDE)
  cmake_install.cmake:46 (INCLUDE)


This has something to do with depending on the 'Installation Vars' for
Insight.
It appears that WrapITK's install is just ignoring CMAKE_INSTALL_PREFIX if
it is built as part of ITK which I don't think is the right thing to do.

On 2/19/11 6:53 AM, "Gaëtan Lehmann" <gaetan.lehmann at jouy.inra.fr> wrote:

>
>Kent,
>
>I've pushed a new fix in ITK. It hasn't been very fun, but I've tested
>it with a single configuration step: it works.
>Please update your ITK repository used to build BRAINS3 and let me
>know if it helps.
>
>Regards,
>
>Gaëtan
>
>
>Le 19 févr. 11 à 09:34, Gaëtan Lehmann a écrit :
>
>>
>> Le 19 févr. 11 à 09:31, Gaëtan Lehmann a écrit :
>>
>>>
>>> Le 18 févr. 11 à 21:49, Williams, Norman K a écrit :
>>>
>>>> I'll start with the bad news, since it's most relevant to Gaetan:
>>>> The
>>>> wrapping is broken with the new ITK4/WrapITK.  This may be a
>>>> CMake/configuration issue; I've never learned enough about WrapITK
>>>> wrapping to understand what the problem is.
>>>>
>>>> At this point, the CMake stuff used to generate wrapping -- which
>>>> worked
>>>> OK in ITK 3.20 -- doesn't even generate a library with ITK4.  I
>>>> don't know
>>>> what the problem is, and staring at the CMakeLists, the stuff in
>>>> ITK/WrapITK, and the generated Makefiles didn't seem to help.
>>>
>>> Kent,
>>>
>>> Have you tried with that patch merged in your ITK repository?
>>>
>>>
>>>http://itk.org/gitweb?p=ITK.git;a=commit;h=5785fb091b2319fc2aff062aef16d
>>>2fee1b4bb84
>>>
>>> Without it, no libraries are configured in tcl if cmake configures
>>> the project in a single pass.
>>> If you are using an external project to build ITK, you should be in
>>> that case.
>>>
>>
>> I've just looked at the dashboard and the build is still broken, so
>> it won't help much.
>> I'm looking at it.
>>
>> Gaëtan
>>
>>> Gaëtan
>>>
>>>>
>>>> At any rate, since all of the BRAINS3 tests are in Tcl, and the TCL
>>>> wrapping doesn't generate a library, none of the BRAINS3 tests run.
>>>>
>>>> Other than that the changes were not too difficult.  Biggest areas
>>>> that
>>>> caused problems:
>>>>
>>>> 1. Stuff that moved out of Review to 'official' ITK --
>>>> a. ITK_USER_REVIEW_STATISTICS is no longer applicable.
>>>> b. many QuadEdgeMesh classes got renamed when they were moved.
>>>> 2. OrientedImage class is gone. Image now is essentially
>>>> OrientedImage.
>>>> For backwards compatibility there is a test in BRAINSCommonLib to
>>>> make
>>>> sure that ITK_USE_ORIENTED_IMAGE_DIRECTION is set, so it's safe to
>>>> just
>>>> get rid of OrientedImage altogether.
>>>> 3. Small API change in itk::Histogram
>>>>
>>>>
>>>>
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>>>
>>> --
>>> Gaëtan Lehmann
>>> Biologie du Développement et de la Reproduction
>>> INRA de Jouy-en-Josas (France)
>>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>>> http://voxel.jouy.inra.fr  http://www.itk.org
>>> http://www.mandriva.org  http://www.bepo.fr
>>>
>>
>> --
>> Gaëtan Lehmann
>> Biologie du Développement et de la Reproduction
>> INRA de Jouy-en-Josas (France)
>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>> http://voxel.jouy.inra.fr  http://www.itk.org
>> http://www.mandriva.org  http://www.bepo.fr
>>
>
>--
>Gaëtan Lehmann
>Biologie du Développement et de la Reproduction
>INRA de Jouy-en-Josas (France)
>tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>http://voxel.jouy.inra.fr  http://www.itk.org
>http://www.mandriva.org  http://www.bepo.fr
>



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