[Insight-developers] ITK wrapping status

[Gaëtan Lehmann]

Le 20 oct. 10 à 22:46, Michal Suchanek a écrit :

> Hello
>
> 2010/10/20 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>
>> Le 20 oct. 10 à 13:12, Michal Suchanek a écrit :
>>
>>> 2010/10/20 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>>
>>>> Hi Michal,
>>>>
>>>> This bug is fixed in the last svn version.
>>>> Make sure to also update your ITK copy: I've just fixed a bug  
>>>> which was
>>>> preventing WrapITK to build.
>>>>
>>>> Gaëtan
>>>>
>>>
>>> Doing some test builds right now but they will take very long since
>>> WrapITK is large and fails to build in parallel.
>>>
>>
>> WrapITK does build in parallel. It is build nightly on 4 different  
>> hosts
>> with at leas 6 parallel jobs for more that a year without any  
>> problem on
>> that side.
>>
>> Some error message would help a lot to understand what is going  
>> wrong with
>> your build.
>
> Obviously the gdcm included in ITK cannot be used for building
> anything when installed.
>
> The parallel build just gets to gdcm early.
>
> I gave up on trying to build anything against that mess, reinstalled a
> gdcm release and pointed WrapITK to it.
>
>>
>>> It looks like WrapITK now gets past the point where it failed  
>>> previously.
>>
>>
>> Great.
>>
>> Please let us know if you find some other problems, or if  
>> everything works
>> as expected ;-)
>
> Thanks for quickly fixing the previous issues.
>
> There is still an error:
>
> [  6%] Generating wrap_itkVectorConfidenceConnectedImageFilter.xml
> cd /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Libraries/ 
> SegmentationAndThreshold
> && /usr/bin/gccxml -fxml-start=_cable
> _ -fxml=/scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/ 
> Libraries/SegmentationAndThreshold/wrap_itkVectorConfidenceConnecte
> dImageFilter.xml --gccxml-gcc-options
> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Libraries/ 
> SegmentationAndThreshold/gc
> c_xml.inc -DCSWIG -DCABLE_CONFIGURATION -DITK_MANUAL_INSTANTIATION
> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Librarie
> s/SegmentationAndThreshold/ 
> wrap_itkVectorConfidenceConnectedImageFilter.cxx
> ...
> /usr/include/InsightToolkit/Numerics/Statistics/ 
> itkMembershipFunctionBase.h:
> In member function 'void itk::Statistics::Membersh
> ipFunctionBase<TVector>::SetMeasurementVectorSize(unsigned int) [with
> TVector = itk::CovariantVector<float, 3u>]':
> /usr/include/InsightToolkit/Common/itkMutexLock.h:59:   instantiated  
> from here
> /usr/include/InsightToolkit/Numerics/Statistics/ 
> itkMembershipFunctionBase.h:87:
> error: 'GetLength' is not a member of 'itk::Num
> ericTraits<itk::CovariantVector<float, 3u> >'
> /usr/include/InsightToolkit/Numerics/Statistics/ 
> itkMembershipFunctionBase.h:
> In member function 'void itk::Statistics::Membersh
> ipFunctionBase<TVector>::SetMeasurementVectorSize(unsigned int) [with
> TVector = itk::CovariantVector<float, 2u>]':
> /usr/include/InsightToolkit/Common/itkMutexLock.h:59:   instantiated  
> from here
> /usr/include/InsightToolkit/Numerics/Statistics/ 
> itkMembershipFunctionBase.h:87:
> error: 'GetLength' is not a member of 'itk::Num
> ericTraits<itk::CovariantVector<float, 2u> >'
> /usr/bin/cmake -E cmake_progress_report
> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/CMakeFiles
> ...
> make[3]: *** [Libraries/SegmentationAndThreshold/ 
> wrap_itkVectorConfidenceConnectedImageFilter.xml]
> Error 1
> make[3]: Leaving directory `/scratch/itk/wrapitk-read-only/obj- 
> x86_64-linux-gnu'
> make[2]: *** [Libraries/SegmentationAndThreshold/CMakeFiles/ 
> SegmentationAndThresholdIdx.dir/all]
> Error 2
> make[2]: *** Waiting for unfinished jobs....


I've just commited a fix in ITK.
I don't know why I haven't seen that bug yesterday...

Gaëtan

-- 
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
http://voxel.jouy.inra.fr  http://www.itk.org
http://www.mandriva.org  http://www.bepo.fr

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