[Insight-developers] gzip and metaIO

[Gaëtan Lehmann]

Hi Kent,

For some days, some of my build were failing badly, sometimes crashing  
the host where they are running after running short in memory.
The problem seems to be with the test itkMetaImageIOGzTest which  
produce a lot (several GB!) of warnings - see the logs at the end of  
the mail.
ctest can't survive to this huge amount of data and die eventually,  
without reporting any problem on the dashboard.

Any idea on what is wrong?

Gaëtan


[glehmann at itk1 ITK-sse64]$ ctest -R itkMetaImageIOGzTest -V | head -n100
UpdateCTestConfiguration  from :/home/papha/glehmann/src/tests/ITK- 
sse64/DartConfiguration.tcl
Parse Config file:/home/papha/glehmann/src/tests/ITK-sse64/ 
DartConfiguration.tcl
  Add coverage exclude regular expressions.
  Add coverage exclude: /CMakeFiles/CMakeTmp/
  Add coverage exclude: .*/Testing/.*
  Add coverage exclude: .*/Wrapping/.*
  Add coverage glob: Source/.*/*.h
  Add coverage glob: Source/.*/*.txx
  Add coverage glob: Source/.*/*.cxx
UpdateCTestConfiguration  from :/home/papha/glehmann/src/tests/ITK- 
sse64/DartConfiguration.tcl
Parse Config file:/home/papha/glehmann/src/tests/ITK-sse64/ 
DartConfiguration.tcl
Test project /home/papha/glehmann/src/tests/ITK-sse64
Constructing a list of tests
Done constructing a list of tests
Checking test dependency graph...
test 1141
     Start 1141: itkMetaImageIOGzTest

1141: Test command: /home/papha/glehmann/src/tests/ITK-sse64/bin/ 
itkIOTests "itkMetaImageIOGzTest" "/home/papha/glehmann/src/tests/ITK- 
sse64/Testing/Temporary"
1141: Test timeout computed to be: 1500
1141: Test whether MetaIO will search for a compressed data file
1141: if it can't find the uncompressed data file
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!
1141: MET_UncompressStream: ERROR Stream is not valid!





-- 
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
http://voxel.jouy.inra.fr  http://www.itk.org
http://www.mandriva.org  http://www.bepo.fr

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