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Mon Dec 15 09:51:36 EST 2008
*"DICOM sample image datasets Web Site"*
link to ( http://pubimage.hcuge.ch:8080/) we took
the dataset
*Alias Name*: CEREBRIX
*Modality*: MR, PET, CT
*File Size: 127 MB*
*Description*: Brain Tumor.
When configuring ITK you can now set the advanced option:
ITK_OSIRIX_DATA_ROOT
To point to the directory where you expanded the CEREBRIX.zip
file. The variable must point to the top directory, not the bottom one.
For example, in my local machine I have:
ITK_OSIRIX_DATA_ROOT:PATH=/home/ibanez/data/Osirix
and the directory /home/ibanez/data/Osirix contains
pwd
/home/ibanez/data/Osirix
ls
CEREBRIX
ls CEREBRIX
Neuro Crane PET PETCT_CTplusFET_LM_Brain (Adult)
Currently the test is set up to "not expect streaming to work".
Please feel free to change when you consider convenient.
Thanks
Luis
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<br>Hi Brad,<br><br>Thanks a lot for setting up all the streaming tests.<br=
><br>Following up on our discussion during last tcon,<br>a test for streami=
ng in the series reader, has now<br>been added to Testing/Code/IO.<br><br>
The filename is:<br><br> itkGDCMSeriesStreamReadImageWrit=
e.cxx<br><br>It is a combination of code from <br><br> itkGDCMS=
eriesReadImageWrite.cxx and<br> itkImageFileReaderStreamingTest=
.cxx<br><br>In order to run it, an option was added to the<br>
top ITK CMakeLists.txt file for locating data<br>from OSIRIX:<br><a href=3D=
"http://www.osirix-viewer.com/Downloads.html">http://www.osirix-viewer.com/=
Downloads.html</a><br><br>From their <br><br><b><font size=3D"-1" face=3D"C=
entury Gothic"><b>"DICOM sample image datasets Web Site</b>"</fon=
t></b><br>
link to ( <a href=3D"http://pubimage.hcuge.ch:8080/">http://pubimage.hcuge.=
ch:8080/</a>) we took<br>the dataset <br><br><font size=3D"-1" color=3D"#1b=
1dcc" face=3D"Century Gothic"><b>Alias Name</b></font><font size=3D"-1" fac=
e=3D"Century Gothic">: CEREBRIX<br>
</font><font size=3D"-1" color=3D"#1b1dcc" face=3D"Century Gothic"><=
b>Modality</b></font><font size=3D"-1" face=3D"Century Gothic">: MR, PET, C=
T<br>
<b><font color=3D"#1b1dcc">File Size</font>: 127 MB</b><br>
</font><font size=3D"-1" color=3D"#1b1dcc" face=3D"Century Gothic"><=
b>Description</b></font><font size=3D"-1" face=3D"Century Gothic">: Brain T=
umor.<br><br>When configuring ITK you can now set the advanced option:<br><=
br> =
ITK_OSIRIX_DATA_ROOT<br>
<br>To point to the directory where you expanded the CEREBRIX.zip<br>file. =
The variable must point to the top directory, not the bottom one.<br><br>Fo=
r example, in my local machine I have:<br><br> ITK_OSIRIX_DATA_=
ROOT:PATH=3D/home/ibanez/data/Osirix<br>
<br>and the directory </font><font size=3D"-1" face=3D"Century Gothic">/hom=
e/ibanez/data/Osirix contains<br><br>pwd<br>/home/ibanez/data/Osirix<=
br><br>ls<br>CEREBRIX<br><br>ls CEREBRIX<br>Neuro Crane PET PETCT_CTp=
lusFET_LM_Brain (Adult)<br>
<br><br></font><font size=3D"-1" face=3D"Century Gothic">Currently the test=
is set up to "not expect streaming to work".<br><br>Please feel =
free to change when you consider convenient.<br><br><br> =
Thanks<br><br><br>
Luis<br><br><br><br></font=
>
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