[Insight-developers] thread safety (or lack) of transforms
Stephen Aylward
Stephen.Aylward at Kitware.com
Wed Aug 13 17:53:21 EDT 2008
I believe that transforms (including calls to transform point) cannot
be assumed to be thread safe.
The reason is the kernel transforms as you suggested. I believe the
thin-plate spline and elastic body spline transforms were the main
problems.
I could be mistaken.
s
On Wed, Aug 13, 2008 at 5:43 PM, Rupert Brooks <rupe.brooks at gmail.com> wrote:
> Hi
>
> A quick question about thread-safety of transforms. Are transforms
> supposed to be thread safe? Are specific functions threadsafe and
> others not?
>
> The optimized image metrics are specifically designed to duplicate the
> transform for each thread. However, the ResampleImageFilter does not
> and neither does the OptResampleImageFilter in the Review directory as
> far as I can tell. So it appears that the ResampleImageFilter assumes
> threadsafety and the metrics dont.
>
> I suspect that this is because the GetJacobian function is inherently
> not threadsafe, but is not used by the ResampleImageFilter and is used
> by the metrics.
>
> Anyway, my question is - does the TransformPoint method of the
> transforms have to be threadsafe, or should ResampleImageFilter be
> changed? I ask because I can optimize my modified Kernel transforms
> significantly if i do not keep the TransformPoint threadsafe. This
> worked in the image metrics, but blew up in the ResampleFilter when i
> tried it. I was just wondering what the intention was when designing
> the multithreaded registration framework. Briefly - theres
> calculations done for the TransformPoint that are also done for the
> GetJacobian. These can be cached, and since the registration
> framework tends to call TransformPoint followed by GetJacobian a lot
> there is a speed gain. This could potentially apply to other
> transforms, but i cant think of a significant example right off.
>
> Thanks
> Rupert
>
> --
> --------------------------------------------------------------
> Rupert Brooks
> McGill Centre for Intelligent Machines (www.cim.mcgill.ca)
> Ph.D Student, Electrical and Computer Engineering
> http://www.cyberus.ca/~rbrooks
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--
Stephen R. Aylward, Ph.D.
Chief Medical Scientist
Kitware, Inc. - North Carolina Office
http://www.kitware.com
(518) 371-3971 x300
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