[IGSTK-Users] Problem with Sagittal/Coronal views

[Michel Audette]

Hi Taruna,

I had a look at your images with the aeskulap viewer, and they don't
appear to comprise a volume in the usual sense. They seem to be a
collection of individual 1-slice images of differing orientations and
modalities. If you have a volume that has the same issues, please
report back.

Best wishes,

Michel
On Mon, Jun 29, 2009 at 11:22 AM, Michel
Audette<michel.audette at kitware.com> wrote:
> Hi Taruna,
>
> thanks for your email. I'll report back shortly.
>
> Best wishes,
>
> Michel
>
> On Mon, Jun 29, 2009 at 11:15 AM, taruna seth<taru.seth at gmail.com> wrote:
>>
>> Hi Michel,
>>
>> I think my previous mail (below) went without the attachment. I am resending
>> it incase you didn't get it earlier.
>>
>> Thanks,
>> Taruna
>> ---------- Forwarded message ----------
>> From: taruna seth <taru.seth at gmail.com>
>> Date: Mon, Jun 29, 2009 at 9:29 AM
>> Subject: Re: [IGSTK-Users] Problem with Sagittal/Coronal views
>> To: Michel Audette <michel.audette at kitware.com>
>>
>>
>> Hello Michel,
>>
>> Sorry for the delay in my mail. I got the mri images directly from the
>> hospital in a CD. I am sending you a subset of my MRI dataset via this email
>> (MRI_TestSubSet.rar) .  I have anonymized some of the fields in the dcm
>> files using a test version of a Sante Dicom Editor S/W so all the images in
>> this test subset have some extra information displayed on the top but it
>> doesn't affect anything. I tested my program using these images, it works
>> fine but still shows everything in the axial view.
>>
>> I am a little bit reluctant to send the data through the website (yousendit)
>> because of privacy concerns.
>> I tried another public dataset (knee-mri) that is available at :
>> http://www.barre.nom.fr/medical/samples/files/MR-MONO2-16-knee.gz
>> I am having the same problem with this dataset too.
>>
>> Please let me know if this information is sufficient for you or if there is
>> anything else that needs to be provided from my side.
>>
>> Thank you for your time and attention to this matter. Looking forward to
>> hear from you.
>>
>> Thanks,
>> Taruna
>>
>> On Sun, Jun 28, 2009 at 4:21 PM, Michel Audette <michel.audette at kitware.com>
>> wrote:
>>>
>>> Hello Taruna,
>>>
>>> if you have a DICOM server, let me know if I can access it with some
>>> sort of public password. Alternately, you could use something like
>>> yousendit.com, if the zipped or tarzipped volume is within their
>>> limit.
>>>
>>> Best wishes,
>>>
>>> Michel
>>>
>>> On Sun, Jun 28, 2009 at 12:13 PM, taruna seth<taru.seth at gmail.com> wrote:
>>> >
>>> > Hi Michel,
>>> >
>>> > Thank you for your mail. I can try to send you a subset of the dataset
>>> > via
>>> > email at your current address (michel.audette at kitware.com) later today.
>>> > Please let me know if this is ok with you or if you would like me to
>>> > mail
>>> > it/upload it at a different location. The complete dataset is very big
>>> > so I
>>> > wouldn't be able to send the entire thing via email.
>>> >
>>> > Thank you again.
>>> >
>>> > Thanks,
>>> > Taruna
>>> >
>>> > On Sat, Jun 27, 2009 at 4:44 PM, Michel Audette
>>> > <michel.audette at kitware.com>
>>> > wrote:
>>> >>
>>> >> Hi Taruna,
>>> >>
>>> >> I would like to have a look at your data and try to reproduce the
>>> >> problem. Please let me know how to proceed.
>>> >>
>>> >> Best wishes,
>>> >>
>>> >> Michel
>>> >>
>>> >> On Fri, Jun 26, 2009 at 12:20 PM, taruna seth<taru.seth at gmail.com>
>>> >> wrote:
>>> >> > Hi,
>>> >> >
>>> >> > I am having trouble loading the sagittal and coronal views of the
>>> >> > CT/MRI
>>> >> > dicom images. For both CT and MRI, the Sagittal and Coronal images
>>> >> > are
>>> >> > getting loaded in the Axial 2D plane instead of showing up in their
>>> >> > Sagittal
>>> >> > and Coronal planes resp.
>>> >> >
>>> >> > I checked the Dicom header fields and noticed that the "Image Type"
>>> >> > field is
>>> >> > listed as either "OTHER" or "SE" for all the images in most of my
>>> >> > datasets.
>>> >> > Could this be causing this problem? Is there a workaround in igstk to
>>> >> > handle
>>> >> > this problem?
>>> >> >
>>> >> > Any help would be greatly appreciated.
>>> >> >
>>> >> > Thanks,
>>> >> > Taruna
>>> >> > _______________________________________________
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>>> >>
>>> >>
>>> >>
>>> >> --
>>> >> Michel Audette, Ph.D.
>>> >> R & D Engineer,
>>> >> Kitware Inc.,
>>> >> Chapel Hill, N.C.
>>> >
>>> >
>>>
>>>
>>>
>>> --
>>> Michel Audette, Ph.D.
>>> R & D Engineer,
>>> Kitware Inc.,
>>> Chapel Hill, N.C.
>>
>>
>>
>
>
>
> --
> Michel Audette, Ph.D.
> R & D Engineer,
> Kitware Inc.,
> Chapel Hill, N.C.
>



-- 
Michel Audette, Ph.D.
R & D Engineer,
Kitware Inc.,
Chapel Hill, N.C.