[IGSTK-Users] View Problem on Sagittal, Coronal MR dateset

Fucang Jia jiafucang at asisz.com
Wed Aug 16 22:27:28 EDT 2006


Hi, Patrick,

I tried several times, because of slow netlink, I can not send the data
to the dataserver. So I will send it to you in next email.

Fucang




Patrick Cheng wrote

Hi Fucang,

Can you upload this dataset to

http://isiswiki.georgetown.edu/DataServer

"Temporary" directory

I will take a look at it.

Thank you,

Patrick

Fucang Jia wrote:
> Hi, Patrick,
>  
> Here I get three scans from one subject, including axial, sagittal and 
> coronal
> scans. I anonymize the DICOM images using AnonymizeNoLoad in the GDCM
> toolkit, do skull stripping using bet2 from FSL software. At last, I use 
> the anonymized
> DICOM header and skull stripped image to concatenate into a set of new DICOM
> images which include neither any personal information nor identified 
> facical information.
> The compressed datasets is about 5.4MB.
>  
> IGSTK do not deal with sagittal or coronal images correctly which can be 
> seen in
> NeedleBiosy app, do you need these anonymized MR DICOM datasets to have 
> a check?
>  
> Thanks!
>  
> Fucang
> 
> 
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