[Ctk-developers] participation to the CTK hackfest @ London

Yves Martelli yves.martelli at upf.edu
Mon Oct 14 08:42:40 UTC 2013


Hi Ernesto,

I'm Yves from the ex-CISTIB of Barcelona's UPF, now part of Galgo Medical (
http://www.galgomedical.com/). The topics you mention are close to those I
was working on. I was focusing on interoperability of command line plugins
in different frameworks. You can find more information on the wiki of CTK
at http://www.commontk.org/index.php/CLI_In_Context. I also published some
code on github: https://github.com/ivmartel/semit.
I wont be able to come to London so I hope this helps.

Best,
Yves


2013/10/14 Ernesto Coto <e.coto at sheffield.ac.uk>

> Hi Jean,
>
> I now have travel arrangements to attend the hackfest. So I'm confirming
> my attendance.
>
> Regarding the topics I would like to address:
>
> 1- I noticed that GIMIAS's Command Line Plugins are not working on CTK's
> Command Line Module Explorer. I would like to look into that. I have an
> idea of the reason why they are not working and I think I can fix that.
> GIMIAS has a large range of Command Line Plugins so I think this could be
> beneficial for both platforms.
>
> 2- In CISTIB, we have a Taverna Workbench (http://www.taverna.org.uk/)
> plugin that makes GIMIAS's Command Line Plugins work as services in
> Taverna. Since there is some compatibility between GIMIAS's CLPs and CTK's
> CLMs. I would like to experiment modifying the plugin a little bit to make
> it able to handle CTK's CLMs.
>
> Regards,
>
> Ernesto
>
> On 4 October 2013 17:09, Jean-Christophe Fillion-Robin <
> jchris.fillionr at kitware.com> wrote:
>
>> Hi Ernesto,
>>
>> Sounds great. The CLI infrastructure is been developer extensively and
>> would welcome some help. Would be great if you could come up with one or
>> two topics/issues you would like to address.
>>
>> Thanks
>> Jc
>>
>>
>> On Wed, Oct 2, 2013 at 5:00 AM, Ernesto Coto <e.coto at sheffield.ac.uk>wrote:
>>
>>> Dear Jean,
>>>
>>> The relationship between CISTIB's GIMIAS and CTK resides on the
>>> command-line interfaces, so I would like to focus on that.
>>>
>>> However, I'm currently exploring other options, if I find something more
>>> interesting I will let you know in a couple of weeks, before the hackfest.
>>>
>>> Cheers,
>>>
>>> *Ernesto Coto*
>>> Scientific Software Developer
>>> Center for Computational Imaging & Simulation Technologies in
>>> Biomedicine (CISTIB)
>>> INSIGNEO Institute for In silico Medicine
>>> The University of Sheffield
>>> Room B85 - Portobello Centre
>>> Pitt St. Sheffield S1 4ET
>>> United Kingdom
>>> T: +44 (0) 114 222 0166
>>> E: e.coto at sheffield.ac.uk
>>>
>>>
>>> On 1 October 2013 14:22, Jean-Christophe Fillion-Robin <
>>> jchris.fillionr at kitware.com> wrote:
>>>
>>>> Hi Ernesto,
>>>>
>>>> Considering the maximum number of participants has not been reached
>>>> [1], you could definitively attend :)
>>>>
>>>> Is there any aspect of CTK you would like to work on during the
>>>> hackfest ? How are you currently using (or will be using) CTK in your
>>>> project ?
>>>>
>>>> Thanks
>>>> Jc
>>>>
>>>> [1] http://www.commontk.org/index.php/CTK-Hackfest-Nov-2013
>>>>
>>>>
>>>> On Tue, Oct 1, 2013 at 7:33 AM, Ernesto Coto <e.coto at sheffield.ac.uk>wrote:
>>>>
>>>>> Hi all,
>>>>>
>>>>> I am Ernesto Coto and I joined CISTIB (Center for Computational
>>>>> Imaging & Simulation Technologies in Biomedicine) at The University of
>>>>> Sheffield (http://www.shef.ac.uk/) a few months ago.
>>>>>
>>>>> I have been working on medical image segmentation and visualization
>>>>> for several years at the Computer Graphics Center (
>>>>> http://ccg.ciens.ucv.ve/) of the Central University of Venezuela (
>>>>> http://www.ucv.ve/).
>>>>>
>>>>> At CISTIB I am part of the Software Development Team and the main
>>>>> CISTIB developer for the VPH-Share project (http://vph-share.eu/).
>>>>>
>>>>> As CISTIB has been supporting CTK for some time, I would like to
>>>>> continue this support by participating in the next CTK hackfest @ London.
>>>>> Please let me know if I Am still on time to participate.
>>>>>
>>>>> Regards,
>>>>>
>>>>> *Ernesto Coto*
>>>>> Scientific Software Developer
>>>>> Center for Computational Imaging & Simulation Technologies in
>>>>> Biomedicine (CISTIB)
>>>>> INSIGNEO Institute for In silico Medicine
>>>>> The University of Sheffield
>>>>> Room B85 - Portobello Centre
>>>>> Pitt St. Sheffield S1 4ET
>>>>> United Kingdom
>>>>> T: +44 (0) 114 222 0166
>>>>> E: e.coto at sheffield.ac.uk
>>>>>
>>>>> _______________________________________________
>>>>> Ctk-developers mailing list
>>>>> Ctk-developers at commontk.org
>>>>> http://public.kitware.com/cgi-bin/mailman/listinfo/ctk-developers
>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> +1 919 869 8849
>>>>
>>>
>>>
>>> _______________________________________________
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>>>
>>>
>>
>>
>> --
>> +1 919 869 8849
>>
>
>
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