[Ctk-developers] CTK Google Plus community (was: Re: DCMTK_DIR is found incorrectly)

Jean-Christophe Fillion-Robin jchris.fillionr at kitware.com
Tue Nov 5 12:56:18 EST 2013 

Here it is :)
See  https://plus.google.com/u/0/communities/105094033241300780178




On Mon, Nov 4, 2013 at 1:08 PM, Steve Pieper <pieper at ibility.net> wrote:

> Sounds like a consistent naming convention :)
>
>
> On Mon, Nov 4, 2013 at 12:00 PM, Jean-Christophe Fillion-Robin <
> jchris.fillionr at kitware.com> wrote:
>
>> I propose to name the community "CTK BarCamp". See
>> http://en.wikipedia.org/wiki/BarCamp
>>
>> What do you think ?
>>
>>
>> On Mon, Nov 4, 2013 at 11:33 AM, Steve Pieper <pieper at ibility.net> wrote:
>>
>>> Would probably help with the multiple timezones too...
>>>
>>>
>>> On Mon, Nov 4, 2013 at 11:18 AM, Jean-Christophe Fillion-Robin <
>>> jchris.fillionr at kitware.com> wrote:
>>>
>>>> Creating the event on G+ automatically add it to my calendar :)
>>>>
>>>> May be we could create a CommonTK Google plus community ?
>>>>
>>>>
>>>> On Mon, Nov 4, 2013 at 11:16 AM, Steve Pieper <pieper at ibility.net>wrote:
>>>>
>>>>> I was planning to just start the hangout and then email the link - do
>>>>> you find that scheduling the event has advantages?  Wouldn't we need a ctk
>>>>> google group or something?
>>>>>
>>>>> Talk to you tomorrow,
>>>>> -Steve
>>>>>
>>>>>
>>>>> On Mon, Nov 4, 2013 at 11:12 AM, Jean-Christophe Fillion-Robin <
>>>>> jchris.fillionr at kitware.com> wrote:
>>>>>
>>>>>> Works for me. Could you create a Google event/hangout ?
>>>>>> Talk to you tomorrow,
>>>>>> Jc
>>>>>>
>>>>>>
>>>>>> On Mon, Nov 4, 2013 at 11:04 AM, Steve Pieper <pieper at ibility.net>wrote:
>>>>>>
>>>>>>> Hi Csaba -
>>>>>>>
>>>>>>> Andreas is here and working on some of the coding input from Julien
>>>>>>> (but the emails to him from the CTK list aren't working right now for some
>>>>>>> reason).
>>>>>>>
>>>>>>> -Steve
>>>>>>>
>>>>>>>
>>>>>>> On Mon, Nov 4, 2013 at 10:21 AM, Csaba Pinter <
>>>>>>> csaba.pinter at queensu.ca> wrote:
>>>>>>>
>>>>>>>>  Hi Steve,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Definitely, I can join the hangout tomorrow. Thanks for discussing
>>>>>>>> the issue!
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Are the DKFZ fellas going to work on the list-based DICOM browser?
>>>>>>>> We'd like to at least start integrating the display database and DICOM
>>>>>>>> roles we implemented last time.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* Steve Pieper [mailto:pieper at ibility.net]
>>>>>>>> *Sent:* November 4, 2013 10:02
>>>>>>>> *To:* Csaba Pinter
>>>>>>>> *Cc:* Jean-Christophe Fillion-Robin; CTK mailing list
>>>>>>>>
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hi Csaba, Jc -
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> London calling (always wanted to say that).  We talked over the
>>>>>>>> issue a bit and didn't see any obvious issues but there was a request from
>>>>>>>> some folks for a further discussion of the underlying issue so we put it on
>>>>>>>> the agenda for a Tuesday afternoon (15:00 London time) hangout.  Does that
>>>>>>>> work for you two?
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Most of the work here this week so far is on CLI, XNAT/REST API,
>>>>>>>> and DICOM.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> http://www.commontk.org/index.php/CTK-Hackfest-Nov-2013
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> -Steve
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Mon, Nov 4, 2013 at 9:34 AM, Csaba Pinter <
>>>>>>>> csaba.pinter at queensu.ca> wrote:
>>>>>>>>
>>>>>>>> Hi JC,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Yes, it seems to have solved our CTK build problem. The reason I
>>>>>>>> was asking about opinions is that I don't know what repercussions it may
>>>>>>>> have on other platforms.
>>>>>>>>
>>>>>>>> If it seems OK the I'd appreciate propagating it to the CTK core or
>>>>>>>> ITK. I can create a CTK topic branch containing the change if it makes the
>>>>>>>> process easier.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* Jean-Christophe Fillion-Robin [mailto:
>>>>>>>> jchris.fillionr at kitware.com]
>>>>>>>> *Sent:* November 4, 2013 09:30
>>>>>>>> *To:* Csaba Pinter
>>>>>>>> *Cc:* pieper at bwh.harvard.edu; CTK mailing list
>>>>>>>>
>>>>>>>>
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Based on your entry in the CTK tracker. I am assuming it is good to
>>>>>>>> go ?
>>>>>>>> See https://github.com/commontk/CTK/issues/382
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Mon, Nov 4, 2013 at 9:28 AM, Jean-Christophe Fillion-Robin <
>>>>>>>> jchris.fillionr at kitware.com> wrote:
>>>>>>>>
>>>>>>>> Hi Csaba,
>>>>>>>>
>>>>>>>> After you confirm that adding NO_DEFAULT_PATH to [1] works. I will
>>>>>>>> coordinate with ITK folks so that they also update their FindDCMTK.cmake
>>>>>>>> file.
>>>>>>>>
>>>>>>>> Thanks
>>>>>>>>
>>>>>>>> Jc
>>>>>>>>
>>>>>>>>
>>>>>>>> [1]
>>>>>>>> https://github.com/commontk/CTK/blob/f64b68acd717dab060db41e8bee3f0f30df1a58f/Utilities/CMake/FindDCMTK.cmake#L42
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Thu, Oct 31, 2013 at 4:46 PM, Csaba Pinter <
>>>>>>>> csaba.pinter at queensu.ca> wrote:
>>>>>>>>
>>>>>>>> Hi Steve,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I was going to do just that, thanks for the reminder!
>>>>>>>>
>>>>>>>> I created issue https://github.com/commontk/CTK/issues/382.
>>>>>>>>
>>>>>>>> The main reason I haven't created a topic branch yet is that I
>>>>>>>> would like to hear some opinions about it first, as I don't know what
>>>>>>>> consequences it has on Linux and Mac.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> FYI my agenda for next week besides this small change is to try our
>>>>>>>> display tables and DICOM roles enhancement for the DICOM browser (that
>>>>>>>> Andras and I implemented during the last hackfest) against the latest
>>>>>>>> listview-based browser and integrate it if it turns out to be working fine.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* Steve Pieper [mailto:pieper at ibility.net]
>>>>>>>> *Sent:* October 31, 2013 16:37
>>>>>>>>
>>>>>>>>
>>>>>>>> *To:* Csaba Pinter
>>>>>>>> *Cc:* CTK mailing list
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hi Csaba -
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> We'll be discussing open issues next week in London - can you make
>>>>>>>> sure there's a ctk issue that points to your assembla report?
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> http://www.commontk.org/index.php/CTK-Hackfest-Nov-2013#Monday
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>>
>>>>>>>> Steve
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Thu, Oct 17, 2013 at 11:02 AM, Csaba Pinter <
>>>>>>>> csaba.pinter at queensu.ca> wrote:
>>>>>>>>
>>>>>>>> Hi there,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Any thoughts about the FindDCMTK changes proposed below?
>>>>>>>>
>>>>>>>> I'd appreciate any feedback.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* ctk-developers-bounces at commontk.org [mailto:
>>>>>>>> ctk-developers-bounces at commontk.org] *On Behalf Of *Csaba Pinter
>>>>>>>> *Sent:* October 10, 2013 15:14
>>>>>>>> *To:* CTK mailing list
>>>>>>>>
>>>>>>>>
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hello,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I tried the NO_DEFAULT_PATH idea Jc was suggesting (see below), and
>>>>>>>> now I could successfully build CTK with DCMTK.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> As we have the same issue from time to time with CTK in Slicer (but
>>>>>>>> finally we could reproduce it, see [1]), I propose adding this flag to
>>>>>>>> FindDCMTK.cmake in the CTK master, at least until the DCMTKConfig.cmake
>>>>>>>> change is not integrated to DCMTK.
>>>>>>>>
>>>>>>>> As my CMake knowledge is limited, I don't know if this change
>>>>>>>> causes any problem on other operating systems though.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I'd appreciate to hear your opinions about this.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thank you,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> [1]
>>>>>>>> https://www.assembla.com/spaces/slicerrt/tickets/325#/activity/ticket
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* Jean-Christophe Fillion-Robin [
>>>>>>>> mailto:jchris.fillionr at kitware.com <jchris.fillionr at kitware.com>]
>>>>>>>> *Sent:* October 4, 2013 18:34
>>>>>>>> *To:* Csaba Pinter
>>>>>>>> *Cc:* Andras Lasso; CTK mailing list
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hi Csaba,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> As illustrated in the enclosed screenshot, build tree can be
>>>>>>>> exported into the CMake package registry. As some point, the DCMTK build
>>>>>>>> tree has probably been exported [1][2][3].
>>>>>>>>
>>>>>>>> Since when building CTK, it is expected that there are no
>>>>>>>> DCMTKConfig.cmake available, the first should be failing. In your case, it
>>>>>>>> seems not to be failing because it resolves to that previous build added to
>>>>>>>> the registery.
>>>>>>>>
>>>>>>>> I would suggest to try adding the parameter "NO_DEFAULT_PATH" to
>>>>>>>> the FindDCMTK.cmake module available in CTK. See [4]
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hth
>>>>>>>>
>>>>>>>> Jc
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> [1]
>>>>>>>> http://www.cmake.org/cmake/help/v2.8.11/cmake.html#command:export
>>>>>>>> [2]
>>>>>>>> http://slicer-devel.65872.n3.nabble.com/Packaging-seems-to-work-again-tp4028121p4028134.html
>>>>>>>>
>>>>>>>> [3]
>>>>>>>> https://www.assembla.com/spaces/slicerrt/tickets/244-dcmtk_dir-vs--dcmtkconfig-cmake?comment=267984263#comment:267984263
>>>>>>>>
>>>>>>>> [4]
>>>>>>>> https://github.com/commontk/CTK/blob/f64b68acd717dab060db41e8bee3f0f30df1a58f/Utilities/CMake/FindDCMTK.cmake#L42
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Fri, Oct 4, 2013 at 5:39 PM, Csaba Pinter <
>>>>>>>> csaba.pinter at queensu.ca> wrote:
>>>>>>>>
>>>>>>>> Hi Jc,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I tried building CTK in many ways, but the result is always the
>>>>>>>> same, so the problem is completely reproducible, at least on my computer (I
>>>>>>>> haven't tried it elsewhere yet, but I plan to). As we have been struggling
>>>>>>>> with this issue for quite a while, but haven't been able to consistently
>>>>>>>> reproduce it, this is a great opportunity to fix it once and for all.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I did some digging and this is what I found:
>>>>>>>>
>>>>>>>> -          FindDCMTK.cmake finds DCMTKConfig.cmake, but it is in
>>>>>>>> the incorrect directory that is used later (in one of my slicer builds)
>>>>>>>>
>>>>>>>> -          The reason why the DCMTK downloaded by the superbuild
>>>>>>>> is not found is most probably that it is a version that doesn't have
>>>>>>>> DCMTKConfig.cmake (as you described earlier)
>>>>>>>>
>>>>>>>> -          The same thing (finding the wrong DCMTK) happens if I
>>>>>>>> add NO_CMAKE_BUILDS_PATH to the find_package call in FindDCMTK.cmake
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Now I don't have any idea how to get the superbuild to use its own
>>>>>>>> DCMTK.
>>>>>>>>
>>>>>>>> Also even if I can do a workaround and have a good build of CTK on
>>>>>>>> my machine, this is an issue that other people who want to build CTK on
>>>>>>>> Windows while already having a Slicer build have to face.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Cheers,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* Jean-Christophe Fillion-Robin [mailto:
>>>>>>>> jchris.fillionr at kitware.com]
>>>>>>>> *Sent:* October 4, 2013 12:07
>>>>>>>> *To:* Andras Lasso
>>>>>>>> *Cc:* Csaba Pinter; CTK mailing list
>>>>>>>>
>>>>>>>>
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hi Csaba, Andras,
>>>>>>>>
>>>>>>>> Within the file FindDCMTK.cmake [1] provided by CTK, where would
>>>>>>>> you suggest to add the NO_CMAKE_BUILDS_PATH ?
>>>>>>>>
>>>>>>>> Let's also note that the FindDCMTK.cmake provided by ITK would have
>>>>>>>> to patched also ...
>>>>>>>>
>>>>>>>> If you can reproduce the problem, with a combination of clearing
>>>>>>>> cache + adding some "message()" statement, you should be able to find out
>>>>>>>> or confirm what is the source of the problem.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Jc
>>>>>>>>
>>>>>>>>
>>>>>>>> [1]
>>>>>>>>
>>>>>>>> https://github.com/commontk/CTK/blob/master/Utilities/CMake/FindDCMTK.cmake
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Wed, Oct 2, 2013 at 1:42 PM, Andras Lasso <lasso at queensu.ca>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>> I have this annoying issue during Slicer builds as well: my nightly
>>>>>>>> slicer builds usually break after a few days because after I configure
>>>>>>>> other projects in CMake CTK finds DCMTK of another project instead of its
>>>>>>>> own.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> It may be due to the find_package path finding rule 5: “Search
>>>>>>>> project build trees recently configured in a CMake GUI. This can be skipped
>>>>>>>> if NO_CMAKE_BUILDS_PATH is passed. It is intended for the case when a user
>>>>>>>> is building multiple dependent projects one after another.“ (
>>>>>>>> http://www.cmake.org/cmake/help/v2.8.10/ctest.html). Probably CTK
>>>>>>>> should rely on rules 1-4 or disable rule 5 – or it may be possible that
>>>>>>>> something else goes wrong and that’s why the rule 5 kicks in.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Andras
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* ctk-developers-bounces at commontk.org [mailto:
>>>>>>>> ctk-developers-bounces at commontk.org] *On Behalf Of *Jean-Christophe
>>>>>>>> Fillion-Robin
>>>>>>>> *Sent:* Wednesday, October 02, 2013 11:39 AM
>>>>>>>>
>>>>>>>>
>>>>>>>> *To:* Csaba Pinter
>>>>>>>> *Cc:* CTK mailing list
>>>>>>>> *Subject:* Re: [Ctk-developers] DCMTK_DIR is found incorrectly
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hi Csaba,
>>>>>>>>
>>>>>>>> In CTKConfig, the variable "CMAKE_MODULE_PATH" is a CMake global
>>>>>>>> variable that is empty by default. On the other hand
>>>>>>>> "CTK_CMAKE_UTILITIES_DIR" should not be empty as illustrated below:
>>>>>>>>
>>>>>>>> $ cat ../CTKConfig.cmake | ack -i "set\(CTK_CMAKE_UTILITIES_DIR"
>>>>>>>> SET(CTK_CMAKE_UTILITIES_DIR
>>>>>>>> "/home/jchris/Projects/CTK/Utilities/CMake")
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Otherwise, you will find below the result of my experiment. When
>>>>>>>> configured, CTK found the expected DCMTK.
>>>>>>>>
>>>>>>>>
>>>>>>>> On Ubuntu 13.04 using CMake 2.8.11.2, after installing the package
>>>>>>>> "python2.7-dev" doing so the following works.
>>>>>>>>
>>>>>>>> Note that I didn't enable CTK_ENABLE_ALL since I didn't the build
>>>>>>>> system to build VTK or ITK components. Instead, I passed the following
>>>>>>>> options:
>>>>>>>>   -DCTK_ENABLE_Python_Wrapping:BOOL=ON
>>>>>>>>   -DCTK_ENABLE_DICOM:BOOL=ON
>>>>>>>>   -DCTK_BUILD_EXAMPLES
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> $ git clone git at github.com:commontk/CTK
>>>>>>>>
>>>>>>>> $ mkdir CTK-Debug
>>>>>>>>
>>>>>>>> $ cd CTK-Debug
>>>>>>>>
>>>>>>>> $ cmake
>>>>>>>> -DQT_QMAKE_EXECUTABLE:FILEPATH=/home/jchris/Support/QtSDK-1.2.1/Desktop/Qt/4.8.1/gcc/bin/qmake
>>>>>>>> -DCTK_ENABLE_Python_Wrapping:BOOL=ON -DCTK_ENABLE_DICOM:BOOL=ON
>>>>>>>> -DCTK_BUILD_EXAMPLES:BOOL=ON ../CTK
>>>>>>>> [...]
>>>>>>>> -- Enabling [CTK_LIB_DICOM/Core] because of [ CTK_ENABLE_DICOM:1 OR
>>>>>>>> ( CTK_ENABLE_DICOMApplicationHosting:0 AND CTK_BUILD_EXAMPLES:1 )]
>>>>>>>> evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOM] because of [ CTK_ENABLE_DICOM:1 AND
>>>>>>>> CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOM2] because of [ CTK_ENABLE_DICOM:1 AND
>>>>>>>> CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOMIndexer] because of [
>>>>>>>> CTK_ENABLE_DICOM:1 AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOMDemoSCU] because of [
>>>>>>>> CTK_ENABLE_DICOM:1 AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOMQuery] because of [ CTK_ENABLE_DICOM:1
>>>>>>>> AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOMRetrieve] because of [
>>>>>>>> CTK_ENABLE_DICOM:1 AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOMQueryRetrieve] because of [
>>>>>>>> CTK_ENABLE_DICOM:1 AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkCommandLineModuleExplorer] because of [
>>>>>>>> CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkDICOMObjectViewer] because of [
>>>>>>>> CTK_ENABLE_DICOM:1 AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Enabling [CTK_APP_ctkSimplePythonShell] because of [
>>>>>>>> CTK_ENABLE_Python_Wrapping:1 AND CTK_BUILD_EXAMPLES:1] evaluates to True
>>>>>>>> -- Generated: /home/jchris/Projects/CTK-Debug/DGraphInput-alldep.txt
>>>>>>>> -- Generated:
>>>>>>>> /home/jchris/Projects/CTK-Debug/DGraphInput-alldep-withext.txt
>>>>>>>> -- Enabling option [CTK_LIB_DICOM/Widgets] required by [ctkDICOM]
>>>>>>>> -- Enabling option [CTK_LIB_Widgets] required by [ctkDICOM]
>>>>>>>> -- Enabling option [CTK_LIB_CommandLineModules/Frontend/QtGui]
>>>>>>>> required by [ctkCommandLineModuleExplorer]
>>>>>>>> -- Enabling option [CTK_LIB_CommandLineModules/Frontend/QtWebKit]
>>>>>>>> required by [ctkCommandLineModuleExplorer]
>>>>>>>> -- Enabling option
>>>>>>>> [CTK_LIB_CommandLineModules/Backend/LocalProcess] required by
>>>>>>>> [ctkCommandLineModuleExplorer]
>>>>>>>> -- Enabling option
>>>>>>>> [CTK_LIB_CommandLineModules/Backend/FunctionPointer] required by
>>>>>>>> [ctkCommandLineModuleExplorer]
>>>>>>>> -- Enabling option [CTK_LIB_CommandLineModules/Core] required by
>>>>>>>> [ctkCommandLineModuleExplorer]
>>>>>>>> -- Enabling option [CTK_LIB_Scripting/Python/Widgets] required by
>>>>>>>> [ctkSimplePythonShell]
>>>>>>>> -- Enabling option [CTK_LIB_Scripting/Python/Core] required by
>>>>>>>> [ctkSimplePythonShell]
>>>>>>>> -- Found PythonInterp: /usr/bin/python (found version "2.7.4")
>>>>>>>> -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so(found version "2.7.4")
>>>>>>>> -- Generated: /home/jchris/Projects/CTK-Debug/DGraphInput.txt
>>>>>>>> -- Generated: /home/jchris/Projects/CTK-Debug/Project.xml
>>>>>>>> -- Found Git: /usr/bin/git (found version "1.8.1.2")
>>>>>>>> -- Configuring done
>>>>>>>> -- Generating done
>>>>>>>> -- Build files have been written to: /home/jchris/Projects/CTK-Debug
>>>>>>>>
>>>>>>>> $ make -j6
>>>>>>>> [...]
>>>>>>>> [ 90%] Performing configure step for 'CTK-Configure'
>>>>>>>> [...]
>>>>>>>> -- Found PythonInterp: /usr/bin/python (found version "2.7.4")
>>>>>>>> -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so(found version "2.7.4")
>>>>>>>> -- Generated:
>>>>>>>> /home/jchris/Projects/CTK-Debug/CTK-build/DGraphInput.txt
>>>>>>>> -- Generated: /home/jchris/Projects/CTK-Debug/CTK-build/Project.xml
>>>>>>>> -- Trying to find DCMTK expecting DCMTKConfig.cmake
>>>>>>>> -- Trying to find DCMTK expecting DCMTKConfig.cmake - failed
>>>>>>>> -- Trying to find DCMTK relying on FindDCMTK.cmake
>>>>>>>> -- Looking for include file pthread.h
>>>>>>>> -- Looking fothe r include file pthread.h - found
>>>>>>>> -- Looking for pthread_create
>>>>>>>> -- Looking for pthread_create - not found
>>>>>>>> -- Looking for pthread_create in pthreads
>>>>>>>> -- Looking for pthread_create in pthreads - not found
>>>>>>>> -- Looking for pthread_create in pthread
>>>>>>>> -- Looking for pthread_create in pthread - found
>>>>>>>> -- Found Threads: TRUE
>>>>>>>> -- Found DCMTK:
>>>>>>>> /home/jchris/Projects/CTK-Debug/CMakeExternals/Install/include/dcmtk/config
>>>>>>>>
>>>>>>>> -- Trying to find DCMTK relying on FindDCMTK.cmake - ok
>>>>>>>> -- CTKCore: BFD support disabled
>>>>>>>> -- Configuring done
>>>>>>>> -- Generating done
>>>>>>>> [...]
>>>>>>>> -- Build files have been written to:
>>>>>>>> /home/jchris/Projects/CTK-Debug/CTK-build
>>>>>>>>
>>>>>>>> [...]
>>>>>>>> [100%] Built target CTKWidgetsCppTests
>>>>>>>> [100%] Built target CTK-build
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> $ cd CTK-build
>>>>>>>> $ $ cat CMakeCache.txt | ack DCMTK_DIR\:PATH
>>>>>>>>
>>>>>>>> DCMTK_DIR:PATH=/home/jchris/Projects/CTK-Debug/CMakeExternals/Install
>>>>>>>>
>>>>>>>> Let's note that DCMTK couldn't be found using DCMTKConfig.cmake,
>>>>>>>> this is explained by the fact the official DCMTK didn't integrate yet our
>>>>>>>> latest and greatest contribution [1]
>>>>>>>>
>>>>>>>> Hth
>>>>>>>>
>>>>>>>> Jc
>>>>>>>>
>>>>>>>>
>>>>>>>> [1]
>>>>>>>> https://github.com/commontk/DCMTK/commit/f461865d1759854db56e4c840991c81c77e45bb9
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Wed, Oct 2, 2013 at 10:18 AM, Csaba Pinter <
>>>>>>>> csaba.pinter at queensu.ca> wrote:
>>>>>>>>
>>>>>>>> Hi all,
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I'm trying to build CTK separately, but I have problems with
>>>>>>>> linking DCMTK.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> The way I build CTK:
>>>>>>>>
>>>>>>>> -          Turn on CTK_BUILD_ALL
>>>>>>>>
>>>>>>>> -          Turn on CTK_ENABLE_DICOM (I need this as I want to
>>>>>>>> merge and test my changes in the CTK/Core/DICOM project)
>>>>>>>>
>>>>>>>> -          Set the qmake executable
>>>>>>>>
>>>>>>>> -          Configure
>>>>>>>>
>>>>>>>> -          CMake complains about python paths, I set those manually
>>>>>>>>
>>>>>>>> -          Configure, Generate
>>>>>>>>
>>>>>>>> -          Build superbuild
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Then DCMTK is downloaded and built by the superbuild, but later on,
>>>>>>>> CTK projects find a completely different DCMTK directory (in my Slicer
>>>>>>>> nightly build directory). I tried to manually add the DCMTK directory to
>>>>>>>> CMake, but this variable does not exist in the superbuild (it is also not
>>>>>>>> passed down), and setting it to the inner CTK project doesn't work.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Basically no matter what I do, the DCMTK path is set to whatever
>>>>>>>> find_project finds. This is what I found in CTKConfig.cmake:
>>>>>>>>
>>>>>>>> # Update CMake module path so that calling "find_package(DCMTK)"
>>>>>>>> works as expected
>>>>>>>>
>>>>>>>> # after calling "find_package(CTK)"
>>>>>>>>
>>>>>>>> # Ideally projects like DCMTK or PythonQt should provide both
>>>>>>>> "Config" and "Use" files.
>>>>>>>>
>>>>>>>> set(CMAKE_MODULE_PATH
>>>>>>>>
>>>>>>>>   ${CTK_CMAKE_UTILITIES_DIR}
>>>>>>>>
>>>>>>>>   ${CMAKE_MODULE_PATH}
>>>>>>>>
>>>>>>>>   )
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Now the problem with this is that ${CMAKE_MODULE_PATH} is empty, so
>>>>>>>> there is no chance DCMTK is found correctly.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Can someone please help with this?
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks a lot,
>>>>>>>>
>>>>>>>> csaba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> ________________________________
>>>>>>>>
>>>>>>>> Csaba Pinter
>>>>>>>>
>>>>>>>> Medical Software Systems Engineer
>>>>>>>>
>>>>>>>> Laboratory for Percutanous Surgery
>>>>>>>>
>>>>>>>> School of Computing
>>>>>>>>
>>>>>>>> Queen’s University
>>>>>>>>
>>>>>>>> Kingston, ON, Canada
>>>>>>>>
>>>>>>>> Email: csaba.pinter at queensu.ca
>>>>>>>>
>>>>>>>> Web: http://perk.cs.queensu.ca
>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> Ctk-developers mailing list
>>>>>>>> Ctk-developers at commontk.org
>>>>>>>> http://public.kitware.com/cgi-bin/mailman/listinfo/ctk-developers
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> +1 919 869 8849
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> +1 919 869 8849
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> +1 919 869 8849
>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> Ctk-developers mailing list
>>>>>>>> Ctk-developers at commontk.org
>>>>>>>> http://public.kitware.com/cgi-bin/mailman/listinfo/ctk-developers
>>>>>>>>
>>>>>>>>
>>>>>>>> The information in this e-mail is intended only for the person to
>>>>>>>> whom it is
>>>>>>>> addressed. If you believe this e-mail was sent to you in error and
>>>>>>>> the e-mail
>>>>>>>> contains patient information, please contact the Partners
>>>>>>>> Compliance HelpLine at
>>>>>>>> http://www.partners.org/complianceline . If the e-mail was sent to
>>>>>>>> you in error
>>>>>>>> but does not contain patient information, please contact the sender
>>>>>>>> and properly
>>>>>>>> dispose of the e-mail.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> Ctk-developers mailing list
>>>>>>>> Ctk-developers at commontk.org
>>>>>>>> http://public.kitware.com/cgi-bin/mailman/listinfo/ctk-developers
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> +1 919 869 8849
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> +1 919 869 8849
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> +1 919 869 8849
>>>>>>
>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> +1 919 869 8849
>>>>
>>>
>>>
>>
>>
>> --
>> +1 919 869 8849
>>
>
>


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