[ITK] [ITK-users] Undefined function SaveMHDData

[Gunjan Naik]

Thanks Dženan Zukić,


As per your guideline, I build an older ITK with version 4.7.2. And set the flags for MetaImage using ImageIO. The Glistr has been built.


Regards,

Gunjan Naik

________________________________
From: Dženan Zukić <dzenanz at gmail.com>
Sent: Monday, July 16, 2018 10:10 PM
To: Gunjan Naik
Cc: Insight-users
Subject: Re: [ITK-users] Undefined function SaveMHDData

SaveMHDData is a function in glistr, and a constructor for MetaImage which it invokes is not available during link stage. It could be something wrong with that library's build system, you could have set up something in a wrong way, or the library is relying on a constructor signature which is no longer available.

MetaImage saw some precision-related update in the last year I think, and that might have changed the constructor signature. You could try with an older version of ITK, e.g. 4.11.

Regards,
Dženan

On Sun, Jul 15, 2018 at 3:04 PM Gunjan Naik <gunjan_naik at persistent.com<mailto:gunjan_naik at persistent.com>> wrote:

Hi,


I wanted to build the Glistr library, for brain tumor segmentation.


URL:http://www.med.upenn.edu/sbia/glistr.html

GLISTR | Section for Biomedical Image Analysis (SBIA ...<http://www.med.upenn.edu/sbia/glistr.html>
www.med.upenn.edu<http://www.med.upenn.edu>
The Section for Biomedical Image Analysis (SBIA), part of the Center of Biomedical Image Computing and Analytics — CBICA, is devoted to the development of computer-based image analysis methods, and their application to a wide variety of clinical research studies.


While building that, I got the following error:

'Linking CXX executable EvaluateQ
CMakeFiles/EvaluateQ.dir/EvaluateQ.cpp.o: In function `int SaveMHDData<float>(char const*, char const*, float****, float****, float****, int, int, int, float, float, float, float, float, float)':
EvaluateQ.cpp:(.text._Z11SaveMHDDataIfEiPKcS1_PPPPT_S6_S6_iiiffffff[_Z11SaveMHDDataIfEiPKcS1_PPPPT_S6_S6_iiiffffff]+0x9c): undefined reference to `MetaImage::MetaImage(int, int, int, float, float, float, MET_ValueEnumType, int, void*)'
collect2: error: ld returned 1 exit status'


Is there any function 'SaveMHDData' in the ITK library, for which I have to set the parameters, while building ITK from source?


Thanks and Regards,

Gunjan Naik

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