[ITK] [ITK-users] ITK 4.12 build issues with cmake 2.8.12

Francois Budin francois.budin at kitware.com
Tue Oct 3 10:55:18 EDT 2017 

Hi,

I see in the compilation flags '-std=c++11`. Did you change any compilation
flags or CMake option? I will try to reproduce your bug locally.

Thanks,
Francois

PS: The new ITK discourse forum is a good place also to post these
questions: https://discourse.itk.org/

On Fri, Sep 29, 2017 at 4:50 PM, Anchit Dhar <Anchit.Dhar at mathworks.com>
wrote:

> Hello,
>
>
>
> I am trying to build ITK 4.12 with cmake 2.8.12 on a linux machine with
> GCC 6.3. My build fails at the configuration sets with the error snippets
> added below.
>
>
>
> I was wondering if there are any known/open build issues with this
> combination on cmake and ITK? Does anyone have any pointers on resolving
> these configuration issues?
>
>
>
> Thanks in advance.
>
>
>
> Regards,
>
> Anchit.
>
>
>
> *Error Snippet*
>
>
>
> Performing C SOURCE FILE Test C_HAS_WARNING-Wno-long-double failed with
> the following output:
>
> Change Dir: /home/adhar/3p-tmw/3p/derived/glnxa64/ITK/CMakeFiles/CMakeTmp
>
>
>
> Run Build Command:"/internal/2106168/glnxa64/gmake/bin/gmake"
> "cmTC_91c4b/fast"
>
> gmake[2]: Entering directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> /internal/2106168/glnxa64/gmake/bin/gmake -f CMakeFiles/cmTC_91c4b.dir/build.make
> CMakeFiles/cmTC_91c4b.dir/build
>
> gmake[3]: Entering directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> Building C object CMakeFiles/cmTC_91c4b.dir/src.c.o
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/gcc    -O2 -pipe -pthread -fPIC
> -DC_HAS_WARNING-Wno-long-double   -Wno-long-double -o
> CMakeFiles/cmTC_91c4b.dir/src.c.o   -c /home/adhar/3p-tmw/3p/derived/
> glnxa64/ITK/CMakeFiles/CMakeTmp/src.c
>
> <command-line>:0:14: warning: ISO C99 requires whitespace after the macro
> name
>
> cc1: warning: unrecognized command line option ‘-Wno-long-double’
>
> Linking C executable cmTC_91c4b
>
> /home/adhar/3p-tmw/3p/private/unknown/glnxa64/cmake-bin/glnx86/cmake -E
> cmake_link_script CMakeFiles/cmTC_91c4b.dir/link.txt --verbose=1
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/gcc  -O2 -pipe -pthread -fPIC
> -DC_HAS_WARNING-Wno-long-double  -pthread -Wl,--hash-style=both
> -L/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/lib
> -Wl,-rpath-link,/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/lib
> CMakeFiles/cmTC_91c4b.dir/src.c.o  -o cmTC_91c4b -rdynamic
>
> gmake[3]: Leaving directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> gmake[2]: Leaving directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
>
>
> Source file was:
>
> int main(void) { return 0; }
>
> Performing C++ SOURCE FILE Test CXX_HAS_WARNING-Wno-long-double failed
> with the following output:
>
> Change Dir: /home/adhar/3p-tmw/3p/derived/glnxa64/ITK/CMakeFiles/CMakeTmp
>
>
>
> Run Build Command:"/internal/2106168/glnxa64/gmake/bin/gmake"
> "cmTC_82695/fast"
>
> gmake[2]: Entering directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> /internal/2106168/glnxa64/gmake/bin/gmake -f CMakeFiles/cmTC_82695.dir/build.make
> CMakeFiles/cmTC_82695.dir/build
>
> gmake[3]: Entering directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> Building CXX object CMakeFiles/cmTC_82695.dir/src.cxx.o
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/g++     -O2 -pipe -pthread -fPIC
> -std=c++11 -DCXX_HAS_WARNING-Wno-long-double   -Wno-long-double -o
> CMakeFiles/cmTC_82695.dir/src.cxx.o -c /home/adhar/3p-tmw/3p/derived/
> glnxa64/ITK/CMakeFiles/CMakeTmp/src.cxx
>
> <command-line>:0:16: warning: ISO C++11 requires whitespace after the
> macro name
>
> cc1plus: warning: unrecognized command line option ‘-Wno-long-double’
>
> Linking CXX executable cmTC_82695
>
> /home/adhar/3p-tmw/3p/private/unknown/glnxa64/cmake-bin/glnx86/cmake -E
> cmake_link_script CMakeFiles/cmTC_82695.dir/link.txt --verbose=1
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/g++   -O2 -pipe -pthread -fPIC
> -std=c++11 -DCXX_HAS_WARNING-Wno-long-double  -pthread
> -Wl,--hash-style=both -L/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/lib
> -Wl,-rpath-link,/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/lib
> CMakeFiles/cmTC_82695.dir/src.cxx.o  -o cmTC_82695 -rdynamic
>
> gmake[3]: Leaving directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> gmake[2]: Leaving directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
>
>
> Source file was:
>
> int main() { return 0;}
>
> Performing C++ SOURCE FILE Test have_gold failed with the following output:
>
> Change Dir: /home/adhar/3p-tmw/3p/derived/glnxa64/ITK/CMakeFiles/CMakeTmp
>
>
>
> Run Build Command:"/internal/2106168/glnxa64/gmake/bin/gmake"
> "cmTC_93f61/fast"
>
> gmake[2]: Entering directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> /internal/2106168/glnxa64/gmake/bin/gmake -f CMakeFiles/cmTC_93f61.dir/build.make
> CMakeFiles/cmTC_93f61.dir/build
>
> gmake[3]: Entering directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> Building CXX object CMakeFiles/cmTC_93f61.dir/src.cxx.o
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/g++     -O2 -pipe -pthread -fPIC
> -std=c++11  -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2
> -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused
> -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated
> -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel
> -Dhave_gold  -fuse-ld=gold   -o CMakeFiles/cmTC_93f61.dir/src.cxx.o -c
> /home/adhar/3p-tmw/3p/derived/glnxa64/ITK/CMakeFiles/CMakeTmp/src.cxx
>
> Linking CXX executable cmTC_93f61
>
> /home/adhar/3p-tmw/3p/private/unknown/glnxa64/cmake-bin/glnx86/cmake -E
> cmake_link_script CMakeFiles/cmTC_93f61.dir/link.txt --verbose=1
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/g++   -O2 -pipe -pthread -fPIC
> -std=c++11  -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2
> -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused
> -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated
> -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel
> -Dhave_gold  -fuse-ld=gold  -pthread -Wl,--hash-style=both
> -L/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/lib
> -Wl,-rpath-link,/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/lib
> CMakeFiles/cmTC_93f61.dir/src.cxx.o  -o cmTC_93f61 -rdynamic
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/ld.gold: -plugin: unknown option
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/ld.gold: use the --help option
> for usage information
>
> collect2: error: ld returned 1 exit status
>
> gmake[3]: Leaving directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> gmake[3]: *** [CMakeFiles/cmTC_93f61.dir/build.make:98: cmTC_93f61] Error
> 1
>
> gmake[2]: *** [Makefile:126: cmTC_93f61/fast] Error 2
>
> gmake[2]: Leaving directory '/home/adhar/3p-tmw/3p/derived/glnxa64/ITK/
> CMakeFiles/CMakeTmp'
>
> .
>
> .
>
> .
>
> .
>
> .
>
> .
>
> .
>
>
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> kwsysPlatformTestsCXX.cxx:24:1: error: ‘__int64’ does not name a type
>
> __int64 f(__int64 n)
>
> ^~~~~~~
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/kwsysPlatformTestsCXX.cxx:
> In function ‘int main()’:
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> kwsysPlatformTestsCXX.cxx:30:3: error: ‘__int64’ was not declared in this
> scope
>
>    __int64 n = 0;
>
>    ^~~~~~~
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> kwsysPlatformTestsCXX.cxx:31:29: error: ‘n’ was not declared in this scope
>
>    return static_cast<int>(f(n));
>
>                              ^
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> kwsysPlatformTestsCXX.cxx:31:30: error: ‘f’ was not declared in this scope
>
>    return static_cast<int>(f(n));
>
>                               ^
>
> gmake[3]: *** [CMakeFiles/cmTC_797a6.dir/build.make:66:
> CMakeFiles/cmTC_797a6.dir/kwsysPlatformTestsCXX.cxx.o] Error 1
>
> .
>
> .
>
> .
>
> .
>
> .
>
> .
>
> .
>
> Checking whether CXX compiler has _atoi64 failed to compile with the
> following output:
>
> Change Dir: /home/adhar/3p-tmw/3p/derived/glnxa64/ITK/Modules/
> ThirdParty/KWSys/src/KWSys/CMakeFiles/CMakeTmp
>
>
>
> Run Build Command:"/internal/2106168/glnxa64/gmake/bin/gmake"
> "cmTC_82d35/fast"
>
> gmake[2]: Entering directory '/home/adhar/3p-tmw/3p/
> derived/glnxa64/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> CMakeFiles/CMakeTmp'
>
> /internal/2106168/glnxa64/gmake/bin/gmake -f CMakeFiles/cmTC_82d35.dir/build.make
> CMakeFiles/cmTC_82d35.dir/build
>
> gmake[3]: Entering directory '/home/adhar/3p-tmw/3p/
> derived/glnxa64/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> CMakeFiles/CMakeTmp'
>
> Building CXX object CMakeFiles/cmTC_82d35.dir/kwsysPlatformTestsCXX.cxx.o
>
> /internal/2501977/glnxa64/gcc-6.3.0/bin/g++
> -DTEST_KWSYS_CXX_HAS__ATOI64  -O2 -pipe -pthread -fPIC  -std=c++11  -Wall
> -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch
> -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings
> -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof
> -Woverloaded-virtual -Wstrict-null-sentinel  -w  -fPIE   -o
> CMakeFiles/cmTC_82d35.dir/kwsysPlatformTestsCXX.cxx.o -c
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> kwsysPlatformTestsCXX.cxx
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/kwsysPlatformTestsCXX.cxx:
> In function ‘int main()’:
>
> /home/adhar/3p-tmw/3p/sources/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> kwsysPlatformTestsCXX.cxx:252:38: error: ‘_atoi64’ was not declared in
> this scope
>
>    return static_cast<int>(_atoi64(str));
>
>                                       ^
>
> gmake[3]: *** [CMakeFiles/cmTC_82d35.dir/build.make:66:
> CMakeFiles/cmTC_82d35.dir/kwsysPlatformTestsCXX.cxx.o] Error 1
>
> gmake[3]: Leaving directory '/home/adhar/3p-tmw/3p/
> derived/glnxa64/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> CMakeFiles/CMakeTmp'
>
> gmake[2]: *** [Makefile:126: cmTC_82d35/fast] Error 2
>
> gmake[2]: Leaving directory '/home/adhar/3p-tmw/3p/
> derived/glnxa64/ITK/Modules/ThirdParty/KWSys/src/KWSys/
> CMakeFiles/CMakeTmp'
>
>
>
>
>
>
>
>
>
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