[ITK] Compilation errors

Matt McCormick matt.mccormick at kitware.com
Wed Aug 9 13:55:54 EDT 2017


Hello Apoorva,

Welcome to ITK!


These messages indicate possible issues with the CMake configuration.


For more information, see the "Configuring and Building ITK" section
of the ITK Software Guide:

  https://itk.org/ITKSoftwareGuide/html/Book1/ITKSoftwareGuide-Book1ch2.html#x22-130002

and find a downloadable HelloWorld example that includes the CMake
configuration here:

  https://itk.org/ITKExamples/src/Core/Common/BuildAHelloWorldProgram/Documentation.html


Hope this helps,
Matt

On Wed, Aug 9, 2017 at 1:32 PM, Apoorva Ajay
<Apoorva.Ajay at utsouthwestern.edu> wrote:
> Hi,
>
>
> I come across this error when I try executing a HelloWorld example program
> on linux. Kindly help me resolve it.
>
>
> Linking CXX executable HelloWorld
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDynamicLoader.cxx.o):
> In function `itk::DynamicLoader::GetSymbolAddress(void*, char const*)':
> itkDynamicLoader.cxx:(.text+0xfa): undefined reference to
> `itksys::DynamicLoader::GetSymbolAddress(void*, std::basic_string<char,
> std::char_traits<char>, std::allocator<char> > const&)'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDynamicLoader.cxx.o):
> In function `itk::DynamicLoader::OpenLibrary(char const*)':
> itkDynamicLoader.cxx:(.text+0x18e): undefined reference to
> `itksys::DynamicLoader::OpenLibrary(std::basic_string<char,
> std::char_traits<char>, std::allocator<char> > const&)'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDynamicLoader.cxx.o):
> In function `itk::DynamicLoader::LastError()':
> itkDynamicLoader.cxx:(.text+0x51): undefined reference to
> `itksys::DynamicLoader::LastError()'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDynamicLoader.cxx.o):
> In function `itk::DynamicLoader::CloseLibrary(void*)':
> itkDynamicLoader.cxx:(.text+0x61): undefined reference to
> `itksys::DynamicLoader::CloseLibrary(void*)'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkMultiThreader.cxx.o):
> In function `global constructors keyed to itkMultiThreader.cxx':
> itkMultiThreader.cxx:(.text+0x122): undefined reference to
> `itksys::SystemToolsManager::SystemToolsManager()'
> itkMultiThreader.cxx:(.text+0x129): undefined reference to
> `itksys::SystemToolsManager::~SystemToolsManager()'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkMultiThreader.cxx.o):
> In function `itk::MultiThreader::GetGlobalDefaultUseThreadPool()':
> itkMultiThreader.cxx:(.text+0x3b5): undefined reference to
> `itksys::SystemTools::GetEnv(char const*, std::basic_string<char,
> std::char_traits<char>, std::allocator<char> >&)'
> itkMultiThreader.cxx:(.text+0x3c4): undefined reference to
> `itksys::SystemTools::UpperCase(std::basic_string<char,
> std::char_traits<char>, std::allocator<char> > const&)'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkMultiThreader.cxx.o):
> In function `itk::MultiThreader::GetGlobalDefaultNumberOfThreads()':
> itkMultiThreader.cxx:(.text+0x6bd): undefined reference to
> `itksys::SystemTools::GetEnv(char const*, std::basic_string<char,
> std::char_traits<char>, std::allocator<char> >&)'
> itkMultiThreader.cxx:(.text+0xa45): undefined reference to
> `itksys::SystemTools::GetEnv(char const*, std::basic_string<char,
> std::char_traits<char>, std::allocator<char> >&)'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDirectory.cxx.o): In
> function `itk::Directory::~Directory()':
> itkDirectory.cxx:(.text+0x7c): undefined reference to
> `itksys::Directory::~Directory()'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDirectory.cxx.o): In
> function `itk::Directory::Directory()':
> itkDirectory.cxx:(.text+0x11a): undefined reference to
> `itksys::Directory::Directory()'
>
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDirectory.cxx.o): In
> function `itk::Directory::Load(char const*)':
> itkDirectory.cxx:(.text+0x18b): undefined reference to
> `itksys::Directory::Load(std::basic_string<char, std::char_traits<char>,
> std::allocator<char> > const&)'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDirectory.cxx.o): In
> function `itk::Directory::PrintSelf(std::basic_ostream<char,
> std::char_traits<char> >&, itk::Indent) const':
> itkDirectory.cxx:(.text+0x227): undefined reference to
> `itksys::Directory::GetPath() const'
> itkDirectory.cxx:(.text+0x2b3): undefined reference to
> `itksys::Directory::GetNumberOfFiles() const'
> itkDirectory.cxx:(.text+0x30d): undefined reference to
> `itksys::Directory::GetFile(unsigned long) const'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDirectory.cxx.o): In
> function `itk::Directory::GetFile(unsigned int)':
> itkDirectory.cxx:(.text+0x37): undefined reference to
> `itksys::Directory::GetFile(unsigned long) const'
> /ITK-sandbox/ITK-build/bin/lib/libITKCommon-4.12.a(itkDirectory.cxx.o): In
> function `itk::Directory::GetNumberOfFiles()':
> itkDirectory.cxx:(.text+0x45): undefined reference to
> `itksys::Directory::GetNumberOfFiles() const'
> collect2: ld returned 1 exit status
> make[2]: *** [HelloWorld] Error 1
> make[1]: *** [CMakeFiles/HelloWorld.dir/all] Error 2
> make: *** [all] Error 2
>
> Thanks and Regards,
>
> Apoorva.D.A
>
>
>
> ________________________________
>
> UT Southwestern
>
> Medical Center
>
>
> The future of medicine, today.
>
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