[ITK] [ITK-users] Reader InvalidRequestedRegionError

[Dženan Zukić]

Hi Matias,

can you check that all images in that series have size 512x512? A possible
cause is if one of the images has size 484x484.

Orientation and region are not connected too much, I doubt that a funky
orientation would cause problems for region.

Regards,
Dženan Zukić, PhD, Senior R&D Engineer, Kitware (Carrboro, N.C.)

On Mon, Aug 7, 2017 at 3:57 PM, matimont <matimontg at gmail.com> wrote:

> Hi,
>
> I'm reading a serie from a directory and I get this:
>
> itk::InvalidRequestedRegionError (0000001D4B9AEDD8)
> Location: "unknown"
> File: c:\itk-4.12.0\modules\io\imagebase\include\itkImageFileReader.hxx
> Line: 350
> Description: ImageIO returns IO region that does not fully contain the
> requested regionRequested region: ImageRegion (0000001D4B9AEDA0)
>   Dimension: 3
>   Index: [0, 0, 0]
>   Size: [512, 512, 1]
> StreamableRegion region: ImageRegion (0000001D4B9AEE00)
>   Dimension: 3
>   Index: [0, 0, 0]
>   Size: [484, 484, 1]
>
> I noticed the images I read have ImageOrientationPatient as:
> (0020,0037)     ImageOrientationPatient
> -0.4181660095794\0.90837062283655\0\0\0\-1
>
> This only patient has failed, all others work
>
> Would this cause the reader to fail?
>
> This is part of the code I use to read the series:
>
> ImageIOType::Pointer gdcmIO = ImageIOType::New();
>   InputNamesGeneratorType::Pointer inputNames =
> InputNamesGeneratorType::New();
>   inputNames->SetInputDirectory( argv[1] );
>
>   const ReaderType::FileNamesContainer & filenames =
>                             inputNames->GetInputFileNames();
>
>   ReaderType::Pointer reader = ReaderType::New();
>
>   reader->SetImageIO( gdcmIO );
>   reader->SetFileNames( filenames );
>   try
>     {
>                 reader->Update();
>     }
>   catch (itk::ExceptionObject &excp)
>     {
>     std::cerr << "Exception thrown while reading the series" << std::endl;
>     std::cerr << excp << std::endl;
>     return EXIT_FAILURE;
>     }
>
> Thanks,
>
> Matias.
>
>
>
> --
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