[ITK] [ITK-dev] Build errors using a different C and CXX compiler

Fri Apr 7 13:49:29 EDT 2017

There is a confirmed bug in the latest release of the Intel Compiler. Any code which compiles in gcc should compile under icc. There is a workaround listed in the last comment here: https://software.intel.com/en-us/comment/1902247. I will notify once a fix has been released. I will try to find out if we can include ITK in regular build tests for ICC development. 

-Jon

-----Original Message-----
From: Matt McCormick [mailto:matt.mccormick at kitware.com] 
Sent: Thursday, April 6, 2017 3:40 PM
To: Lefman, Jonathan <jonathan.lefman at intel.com>
Cc: insight-developers at itk.org
Subject: Re: Build errors using a different C and CXX compiler

Excellent, thanks, Jon!

On Thu, Apr 6, 2017 at 3:35 PM, Lefman, Jonathan <jonathan.lefman at intel.com> wrote:
> Matt,
>
> I just met with a technical lead for the Intel compiler front-end group to review this issue. I may have uncovered a bug in the front-end logic. They are investigating to dig into the reason for this anomaly. When I receive their analysis, I will report back what the next steps are.
>
> -Jon
>
> -----Original Message-----
> From: Matt McCormick [mailto:matt.mccormick at kitware.com]
> Sent: Wednesday, April 5, 2017 5:17 PM
> To: Lefman, Jonathan <jonathan.lefman at intel.com>
> Cc: insight-developers at itk.org
> Subject: Re: Build errors using a different C and CXX compiler
>
> Hi Jon,
>
> It does not look like we have working builds of ICC on the dashboard [1]. As they say, if it not tested, it is broken. There are two x86_64 ICC builds, but they either have a build system issue, or ITK needs to be updated to use this compiler. What version of the compiler is it?
>
> Thanks,
> Matt
>
> [1] https://open.cdash.org/index.php?project=Insight
>
> On Wed, Apr 5, 2017 at 4:57 PM, Lefman, Jonathan <jonathan.lefman at intel.com> wrote:
>> Hi all,
>>
>>
>>
>> I am attempting to build ITK from source (have tried using v4.11.0 
>> and
>> master) using a different CXX compiler. To start, I do not have an 
>> issue when I utilize the default compiler (gcc) as much compiler. 
>> This works fine; tests are successful.
>>
>>
>>
>> The error I encounter on both Ubuntu and Centos systems is the same.
>> It looks like this on the make output:
>>
>> [ 58%] Building CXX object
>> Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.
>> dir/itkRayCastInterpolateImageFunctionTest.cxx.o
>>
>> /src/ITK/Modules/Core/ImageFunction/include/itkRayCastInterpolateImageFunction.hxx(38):
>> error: member "<unnamed>::RayCastHelper<TInputImage,
>> TCoordRep>::InputImageDimension [with TInputImage=itk::Image<unsigned 
>> TCoordRep>char,
>> 3U>, TCoordRep=double]" was referenced but not defined
>>
>>     itkStaticConstMacro(InputImageDimension, unsigned int,
>>
>>     ^
>>
>>
>>
>> compilation aborted for
>> /src/ITK/Modules/Core/ImageFunction/test/itkRayCastInterpolateImageFu
>> n
>> ctionTest.cxx
>> (code 2)
>>
>> make[2]: ***
>> [Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDrive
>> r .dir/itkRayCastInterpolateImageFunctionTest.cxx.o]
>> Error 2
>>
>> make[1]: ***
>> [Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDrive
>> r
>> .dir/all]
>> Error 2
>>
>> make: *** [all] Error 2
>>
>>
>>
>> My cmake setup looks like this:
>>
>> CC=/intel/bin/icc CXX=/intel/bin/icc cmake 
>> -DCMAKE_CXX_COMPILER:FILEPATH=$CXX -DCMAKE_C_COMPILER:FILEPATH=$CC 
>> -DModule_PerformanceBenchmarking:BOOL=ON ..
>>
>>
>>
>> Example generated CXX_FLAGS are from:
>> ./Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriv
>> e
>> r.dir/flags.make
>>
>> # compile CXX with /intel/bin/icc
>>
>> CXX_FLAGS =   -w2 -wd1268 -wd981 -wd383 -wd1418 -wd1419 -wd2259 -wd1572
>> -wd424 -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch 
>> -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -Wno-deprecated 
>> -Wno-invalid-offsetof -Woverloaded-virtual  -O3 -DNDEBUG -fPIE 
>> -I/src/ITK/Modules/Core/ImageAdaptors/include
>> -I/src/ITK/build_icc/Modules/ThirdParty/KWIML/src
>> -I/src/ITK/Modules/ThirdParty/KWIML/src
>> -I/src/ITK/build_icc/Modules/ThirdParty/KWSys/src
>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/v3p/netlib
>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/vcl
>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/core
>> -I/src/ITK/build_icc/Modules/ThirdParty/VNL/src/vxl/v3p/netlib
>> -I/src/ITK/build_icc/Modules/ThirdParty/VNL/src/vxl/vcl
>> -I/src/ITK/build_icc/Modules/ThirdParty/VNL/src/vxl/core
>> -I/src/ITK/Modules/ThirdParty/VNLInstantiation/include
>> -I/src/ITK/build_icc/Modules/Core/Common
>> -I/src/ITK/Modules/Core/Common/include
>> -I/src/ITK/build_icc/Modules/ThirdParty/Netlib
>> -I/src/ITK/Modules/Numerics/Statistics/include
>> -I/src/ITK/Modules/Filtering/ImageFilterBase/include
>> -I/src/ITK/Modules/Core/Transform/include
>> -I/src/ITK/Modules/Core/ImageFunction/include
>> -I/src/ITK/Modules/ThirdParty/DoubleConversion/src/double-conversion
>> -I/src/ITK/build_icc/Modules/ThirdParty/DoubleConversion/src/double-c
>> o
>> nversion
>> -I/src/ITK/Modules/IO/BMP/include
>> -I/src/ITK/build_icc/Modules/ThirdParty/Expat/src/expat
>> -I/src/ITK/Modules/ThirdParty/Expat/src/expat
>> -I/src/ITK/build_icc/Modules/ThirdParty/ZLIB/src
>> -I/src/ITK/Modules/ThirdParty/ZLIB/src
>> -I/src/ITK/build_icc/Modules/ThirdParty/GDCM
>> -I/src/ITK/build_icc/Modules/ThirdParty/GDCM/src/gdcm/Source/Common
>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/MediaStorageAndFil
>> e
>> Format
>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/DataDictionary
>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/Common
>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectD
>> e
>> finition
>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/MessageExchangeDef
>> i
>> nition
>> -I/src/ITK/Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEn
>> c odingDefinition -I/src/ITK/Modules/IO/GDCM/include
>> -I/src/ITK/Modules/IO/GIPL/include
>> -I/src/ITK/build_icc/Modules/IO/ImageBase
>> -I/src/ITK/Modules/IO/ImageBase/include
>> -I/src/ITK/Modules/IO/JPEG/include
>> -I/src/ITK/build_icc/Modules/ThirdParty/MetaIO/src/MetaIO/src
>> -I/src/ITK/Modules/ThirdParty/MetaIO/src/MetaIO/src
>> -I/src/ITK/Modules/IO/Meta/include 
>> -I/src/ITK/Modules/IO/NIFTI/include
>> -I/src/ITK/Modules/IO/NRRD/include -I/src/ITK/Modules/IO/PNG/include 
>> -I/src/ITK/Modules/IO/TIFF/include -I/src/ITK/Modules/IO/VTK/include 
>> -I/src/ITK/Modules/Core/TestKernel/include
>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo
>> -I/src/ITK/Modules/ThirdParty/VNL/src/vxl/core/vnl
>>
>>
>>
>> Does anyone have a pointer to see where this error comes from? Thank you.
>>
>>
>>
>> -Jon
>>
>>
_______________________________________________
Powered by www.kitware.com

Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html

Kitware offers ITK Training Courses, for more information visit:
http://kitware.com/products/protraining.php

Please keep messages on-topic and check the ITK FAQ at:
http://www.itk.org/Wiki/ITK_FAQ

Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/insight-developers