[ITK] [ITK-dev] VCL install issues
Lowekamp, Bradley (NIH/NLM/LHC) [C]
blowekamp at mail.nih.gov
Wed Jul 20 16:25:09 EDT 2016
Hello,
I can getting the following missing header error when using and installed ITK from master:
[ 37%] Generating src/sitkComplexToPhaseImageFilter.cxx
In file included from /tmp/SimpleITK/Code/Explicit/src/sitkExplicitITKImageRegion.cxx:19:
In file included from /tmp/SimpleITK/Code/Explicit/include/sitkExplicitITKImageRegion.h:21:
In file included from /usr/local/include/ITK-4.11/itkImageRegion.h:31:
In file included from /usr/local/include/ITK-4.11/itkRegion.h:31:
In file included from /usr/local/include/ITK-4.11/itkObject.h:31:
In file included from /usr/local/include/ITK-4.11/itkLightObject.h:25:
In file included from /usr/local/include/ITK-4.11/itkAtomicInt.h:38:
In file included from /usr/local/include/ITK-4.11/itkConceptChecking.h:32:
In file included from /usr/local/include/ITK-4.11/itkNumericTraits.h:51:
In file included from /usr/local/include/ITK-4.11/vcl_limits.h:5:
/usr/local/include/ITK-4.11/vcl_compiler.h:121:10: fatal error: 'vcl_config_manual.h' file not found
#include <vcl_config_manual.h>
^
Here is the DockerFile I was working with:
== DockerFile ==
FROM ubuntu:14.04
RUN \
apt-get update && \
apt-get -y upgrade && \
apt-get install -y build-essential clang git curl swig python-dev
RUN \
curl -O https://cmake.org/files/v3.6/cmake-3.6.0-Linux-x86_64.sh && \
umask 022 && echo "y\n" | bash cmake-3.6.0-Linux-x86_64.sh --prefix=/usr/local --exclude-subdir
WORKDIR /tmp/
RUN \
git clone https://itk.org/ITK.git && \
cd ITK && \
git checkout master && \
mkdir bld
RUN \
cd ITK/bld && \
CC=clang CXX=clang++ cmake \
-DBUILD_SHARED_LIBS:BOOL=ON \
-DUSE_COMPILER_HIDDEN_VISIBILITY:BOOL=OFF \
-DBUILD_TESTING:BOOL=OFF \
-DModule_ITKReview:BOOL=ON \
.. && \
make -j $(nproc) install && \
ldconfig
RUN \
git clone https://itk.org/SimpleITK.git && \
cd SimpleITK && \
git checkout master && \
mkdir bld
RUN \
cd SimpleITK/bld && \
CC=clang CXX=clang++ cmake \
-DBUILD_SHARED_LIBS:BOOL=ON \
-DWRAP_LUA:BOOL=OFF \
-DWRAP_PYTHON:BOOL=ON \
-DUSE_SYSTEM_SWIG:BOOL=ON \
-DUSE_SYSTEM_ITK:BOOL=ON \
-DBUILD_TESTING:BOOL=OFF \
../SuperBuild && \
make -j $(nproc)
== end ==
Thanks,
Brad
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