[ITK] [ITK-users] 3D Binary Mask to Point Set - 3D Image Registration -

[Andras Lasso]

The point I'm trying to make is that you should not start developing a custom application from scratch before you have a complete, proven, and tested solution.

You can develop and test solutions very quickly by using existing application frameworks (3D Slicer, MITK, Paraview, etc). They all allow writing plugins to add custom algorithms or streamlined user interface.

Andras

From: Abdelkhalek Bakkari [mailto:bakkari.abdelkhalek at hotmail.fr]
Sent: December 3, 2016 18:08
To: Andras Lasso <lasso at queensu.ca>; insight-users <insight-users at itk.org>
Subject: Re: [ITK] [ITK-users] 3D Binary Mask to Point Set - 3D Image Registration -




Hi Andras,



I am not using just using examples. But, I am creating my own application from existing examples in ITK.





________________________________
From: Andras Lasso <lasso at queensu.ca<mailto:lasso at queensu.ca>>
Sent: 03 December 2016 23:57
To: Abdelkhalek Bakkari
Subject: RE: [ITK] [ITK-users] 3D Binary Mask to Point Set - 3D Image Registration -

Hi Abdelkhalek,

ITK is a only for algorithm developers or advanced users (who can figure out how to perform simple operations such as applying a transform from the plenty of examples and tests that are included in ITK). If you want to just use algorithms then it's much more efficient to use applications that ITK is integrated into.

For example, applying a transform to a DICOM series is a trivial operation in 3D Slicer (drag-and-drop DICOM directory to import your DICOM data, use DICOM module to load DICOM series, drag-and-drop transform file to load transform, using Transforms module apply transform to image). You can also perform all kinds of analysis, segmentation, quantification, and visualization tasks in Slicer (you can visualize the original and transformed volume, original and transformed landmark points, segmented surfaces; or the transformation itself). You can also fully script all operations if you need to process a large number of sequences in batch mode.

Andras

From: Abdelkhalek Bakkari<mailto:bakkari.abdelkhalek at hotmail.fr>
Sent: Saturday, December 3, 2016 17:39
To: insight-users<mailto:insight-users at itk.org>
Subject: [ITK] [ITK-users] 3D Binary Mask to Point Set - 3D Image Registration -

Hi,

I am a little familiar with ITK.
I just need to know how can I apply the model to Image registration 2 to a dicom image  series.


https://itk.org/Doxygen/html/Examples_2RegistrationITKv4_2ModelToImageRegistration2_8cxx-example.html#_a13


Thank you inadvance.

Kind regards,


Abdelkhalek Bakkari
Ph.D candidate in Computer Science
Institute of Applied Computer Science
Lodz University of Technology, Poland


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