[ITK] Edit .mha header

[Gustafsson, Helen (Health)]

Hello all,

We are working on a project where we are reconstructing cone beam CT data using the ITK software, creating an .mha file which we then need to convert to DICOM - I was hoping to use 3Dslicer for this. Our problem is that the image orientation in the mha header seems to be incorrect (?), so 3D slicer is trying to make axial slices from what it thinks is a coronal slice. I have been googling ways to edit the mha header but I can't find anything that works.

Any ideas about how to solve this?

Thanks,
Helen

-----------------------------------------------------------------------
This email, and any attachments, may be confidential and also privileged. If you are not the intended recipient, please notify the sender and delete all copies of this transmission along with any attachments immediately. You should not copy or use it for any purpose, nor disclose its contents to any other person.
-----------------------------------------------------------------------
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://public.kitware.com/pipermail/community/attachments/20141027/e2ce55fb/attachment.html>