[ITK] [ITK-dev] cannot enable python wrapping in ITK
Rashad M
mohammedrashadkm at gmail.com
Thu Jun 5 08:34:56 EDT 2014
Hi again,
I succeeded in building python bindings. First i disabled internal swig
ITK_USE_SYSTEM_SWIG=ON
cd Wrapping/Generators
make clean
make
Copying itk.py to build dir.
Copying itkBase.py to build dir.
Copying itkTemplate.py to build dir.
Copying itkTypes.py to build dir.
Copying itkExtras.py to build dir.
Copying itkLazy.py to build dir.
Built target copy_python_files
if i do make install from Wrapping/Generators, I got:
-- Install configuration: "Release"
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/CMakeLists.txt
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/itk.i
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itkConfig.py
-- Installing:
/home/rashad/local/lib/ITK-4.6/Python/WrapITKBuildOptionsPython.py
-- Installing:
/home/rashad/local/lib/ITK-4.6/Python/Configuration/WrapITKBuildOptionsConfig.py
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itk.py
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itkBase.py
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itkTemplate.py
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itkTypes.py
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itkExtras.py
-- Installing: /home/rashad/local/lib/ITK-4.6/Python/itkLazy.py
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/CMakeLists.txt
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
ExternalProjectConfig.pth.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
ExternalProjectConfig.py.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
ModuleConfig.py.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
ModuleLoader.py.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
WrapITK.pth.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
itkConfig.py.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
main_module_ext.i.in
-- Installing:
/home/rashad/local/lib/cmake/ITK-4.6/WrapITK/Configuration/Generators/Python/
module_ext.i.in
But if i go to top level directory
cd ~/build/trunk-itk
make
I am getting the error in last message:
[ 45%] Built target copy_python_files
[ 45%] Generating pyBasePython.cpp, ../../../../lib/pyBasePython.py
/bin/sh:
/home/rashad/build/trunk-itk/Wrapping/Generators/SwigInterface/swig/bin/swig:
No such file or directory
make[2]: *** [Wrapping/Generators/Python/PyBase/pyBasePython.cpp] Error 127
make[1]: ***
[Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/all]
Error 2
I think this is trying to use internal swig even if ITK_USE_SYSTEM_SWIG=OFF
On Thu, Jun 5, 2014 at 12:09 PM, Rashad M <mohammedrashadkm at gmail.com>
wrote:
> ITK version from git master
>
> git pull gives: Already up-to-date.
>
> Platform: Linux Fedora 20 x86_64
> Python: Python 2.7.5 (default, Feb 19 2014, 13:47:28)
> [GCC 4.8.2 20131212 (Red Hat 4.8.2-7)] on linux2
>
> System SWIG:
> SWIG Version 2.0.11
>
> Compiled with g++ [x86_64-redhat-linux-gnu]
>
> Configured options: +pcre
>
> I followed your suggestion and enabled only ITK_WRAP_PYTHON=ON and I am
> getting the below error during make
>
> make[2]: *** No rule to make target
> `/home/rashad/code/itk/ITK/Wrapping/Generators/Python/PyBase/swig', needed
> by `Wrapping/Generators/Python/PyBase/pyBasePython.cpp'. Stop.
> make[1]: ***
> [Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/all]
> Error 2
>
>
>
>
> On Thu, Jun 5, 2014 at 11:40 AM, Michka Popoff <michkapopoff at gmail.com>
> wrote:
>
>> Hi
>>
>> I changed to the community mailing list to answer your question, so
>> everybody sees it.
>>
>>
>> To build the python wrappings, you juste need the DITK_WRAP_PYTHON=ON
>> option.
>> Note: Java, Ruby and TCL can stay OFF, those are not supported for the
>> moment (even if the options are present in cmake).
>> I would need more details to be able to help you:
>>
>> - Which version of ITK are you trying to build
>> - What version of python
>> - On what platform (linux, mac, win ?) are you trying this.
>>
>> Michka
>>
>> Le 5 juin 2014 à 11:01, Rashad M a écrit :
>>
>> Hi,
>>
>> I tried to build python bindings for ITK and build failed with below
>> output:
>>
>> canning dependencies of target ITKPyBasePython
>> [ 23%] Building CXX object
>> Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/ITKPyBasePython.cpp.o
>> [ 23%] Building CXX object
>> Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/pyBasePython.cpp.o
>> Linking CXX shared module ../../../../lib/_ITKPyBasePython.so
>> [ 23%] Built target ITKPyBasePython
>> Scanning dependencies of target ITKCommonIdx
>> [ 23%] Generating ../../Typedefs/vcl_complex.idx
>> Traceback (most recent call last):
>> File
>> "/home/rashad/code/itk/ITK/Wrapping/Generators/SwigInterface/idx.py", line
>> 28, in <module>
>> res = pygccxml_reader.read_xml_file(sys.argv[1])
>> File
>> "/home/rashad/code/itk/ITK/Wrapping/Generators/SwigInterface/pygccxml-1.0.0/pygccxml/parser/source_reader.py",
>> line 240, in read_xml_file
>> ffname = self.__file_full_name(gccxml_created_file)
>> File
>> "/home/rashad/code/itk/ITK/Wrapping/Generators/SwigInterface/pygccxml-1.0.0/pygccxml/parser/source_reader.py",
>> line 277, in __file_full_name
>> raise RuntimeError( "pygccxml error: file '%s' does not exist" % file
>> )
>> RuntimeError: pygccxml error: file
>> '/home/rashad/build/itk/ITK_/Wrapping/Typedefs/vcl_complex.idx' does not
>> exist
>> make[2]: *** [Wrapping/Typedefs/vcl_complex.idx] Error 1
>> make[1]: *** [Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonIdx.dir/all]
>> Error 2
>> make: *** [all] Error 2
>>
>>
>> For cmake I had given
>> cmake -DITK_WRAPING=ON -DITK_WRAP_PYTHON=ON -DITK_USE_SYSTEM_SWIG=OFF
>> -DITK_WRAP_SWIGINTERFACE=ON
>>
>> but ITK_WRAP_ ( GCCXML JAVA, RUBY, TCL ) are also OFF.
>>
>>
>> I dont need gccxml and it is off in my cmake configuration but I am
>> getting pygccxml error
>>
>> Any ideas?
>>
>> --
>> Regards,
>> Rashad
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>>
>
>
> --
> Regards,
> Rashad
>
--
Regards,
Rashad
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