[ITK Community] Fwd: Runtime error while running ResampleDICOM example on Ubuntu13.10

Alok alok.theanomaly at gmail.com
Tue Feb 25 13:36:41 EST 2014


Hi Luis,

I have not tried out what you suggested yet. But I built ITK again with
g++-4.6 and gcc-4.6 and its working for me now.

I am currently using ITK-4.3 since the project I am working on was written
using this version of ITK.

Does that make any sense?

Thanks
Alok


On Tue, Feb 25, 2014 at 10:45 AM, Luis Ibanez <luis.ibanez at kitware.com>wrote:

> Hi Alok,
>
> It may help to inspect closely the output on
>
> const ReaderType::FileNamesContainer & filenames =
>                             inputNames->GetInputFileNames();
>
>
>
> Something must be going on with the location of the Directory name,
> (e.g. maybe spaces in the path ?), or maybe a mixture of extraneous
>
> files in the DICOM directory.
>
>
>    HTH
>
>
>
>        Luis
>
>
>
>
> On Tue, Feb 25, 2014 at 8:22 AM, Alok <alok.theanomaly at gmail.com> wrote:
>
>>
>>
>> Hi,
>>
>> I have a problem reading in DiCOM image series when running ITK on Ubuntu
>> 13.10 (32-bit)
>>
>> I have a DICOM image series and I am trying to run the ResampleDICOM
>> example here - http://www.itk.org/Wiki/ITK/Examples/DICOM/ResampleDICOM
>>
>> *At runtime* I get an error which looks like :
>> WARNING: In
>> .../InsightToolkit-4.3.1/Modules/IO/GDCM/src/itkGDCMSeriesFileNames.cxx,
>> line 114
>> GDCMSeriesFileNames (0xa12e9e0): No Series can be found, make sure your
>> restrictions are not too strong
>>
>> Exception thrown while reading the series
>>
>> itk::ExceptionObject (0xa133fe8)
>> Location: "unknown"
>> File: /usr/local/include/ITK-4.3/itkImageSeriesReader.hxx
>> Line: 131
>> Description: itk::ERROR: ImageSeriesReader(0xa1312a0): At least one
>> filename is required.
>>
>>
>> When I run it on a machine with Ubuntu 12.04 (using the same DICOM
>> series) it runs through - The output is as below:
>>
>> The input series in directory /home/alok/data/HSSPlan/Left/dicom/ has 219
>> files with spacing [0.347656, 0.347656, 1]
>> The output series in directory ./output/ has 219 files with spacing
>> [0.347656, 1, 1]
>>
>> Any suggestions/comments much appreciated
>>
>> Thanks
>> Alok
>>
>>
>>
>> --
>> I live a simple life...  in 0s and 1s !
>>
>>
>>
>> --
>> I live a simple life...  in 0s and 1s !
>>
>> _______________________________________________
>> Community mailing list
>> Community at itk.org
>> http://public.kitware.com/cgi-bin/mailman/listinfo/community
>>
>>
>


-- 
I live a simple life...  in 0s and 1s !
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