[ITK] SCIFIO throws exception

[Michael Meuli]

Hi,

I'm trying to read the test image "single-channel.ome.tif" from
http://www.openmicroscopy.org/site/support/ome-model/ome-tiff/data.html
JAVA_HOME is set to "/usr/lib/jvm/java-8-oracle/jre/bin/java"
Running "SCIFIOTestDriver itkSCIFIOImageIOTest" gives me a very similar error.
I'm running Ubuntu 13.10 32bit with ITK-4.5.1

Below is the text of the error message:

Problem encoutered while reading image file :
/home/michael/Colocalization/Data/single-channel.ome.tif

itk::ExceptionObject (0x8e283f0)
Location: "unknown"
File: /home/michael/Colocalization/ITK-4.5.1-build/Modules/Remote/SCIFIO/src/itkSCIFIOImageIO.cxx
Line: 408
Description: itk::ERROR: SCIFIOImageIO(0x8e27000): SCIFIOImageIO:
ITKReadImageInformation error:
Not a directory


Many thanks
Michael
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cmake_minimum_required(VERSION 2.6)
 
PROJECT(Test)
 
FIND_PACKAGE(ITK REQUIRED SCIFIO)
INCLUDE(${ITK_USE_FILE})
 
if(NOT SCIFIO_LOADED)
  message(FATAL_ERROR "SCIFIO module is required but not available.")
endif()
 
ADD_EXECUTABLE(Test Test.cxx)
TARGET_LINK_LIBRARIES(Test ${ITK_LIBRARIES})
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Problem encoutered while reading image file : /home/michael/Colocalization/Data/single-channel.ome.tif

itk::ExceptionObject (0x8e283f0)
Location: "unknown" 
File: /home/michael/Colocalization/ITK-4.5.1-build/Modules/Remote/SCIFIO/src/itkSCIFIOImageIO.cxx
Line: 408
Description: itk::ERROR: SCIFIOImageIO(0x8e27000): SCIFIOImageIO: ITKReadImageInformation error:
Not a directory