[ITK Community] [Insight-users] itk AnisotropicDiffusion VesselEnhancement ImageFilter crashes

[Prashanth]

Luis,
  Thanks for the response. I ran the code in Debug mode.

Here's the error message: Unhandled exception in
itkAnisotropicDiffusionVesselEnhancementImageFilterTest.exe. Access
violation reading location.

And, here's the output from the call stack.

itkAnisotropicDiffusionVesselEnhancementImageFilterTest.exe!itk::
*NeighborhoodAccessorFunctor*<itk::Image<itk::DiffusionTensor3D<double>,3>
>::*Get*(const itk::DiffusionTensor3D<double> * pixelPointer) Line 68
  itkAnisotropicDiffusionVesselEnhancementImageFilterTest.exe!itk::ConstNeighborhoodIterator<itk::Image<itk::DiffusionTensor3D<double>,3>,itk::ZeroFluxNeumannBoundaryCondition<itk::Image<itk::DiffusionTensor3D<double>,3>,itk::Image<itk::DiffusionTensor3D<double>,3>
> >::GetPixel(unsigned long i) Line 171

itkAnisotropicDiffusionVesselEnhancementImageFilterTest.exe!itk::AnisotropicDiffusionVesselEnhancementFunction<itk::Image<double,3>
>::ComputeUpdate(const
itk::ConstNeighborhoodIterator<itk::Image<double,3>,itk::ZeroFluxNeumannBoundaryCondition<itk::Image<double,3>,itk::Image<double,3>
> > & it, const
itk::ConstNeighborhoodIterator<itk::Image<itk::DiffusionTensor3D<double>,3>,itk::ZeroFluxNeumannBoundaryCondition<itk::Image<itk::DiffusionTensor3D<double>,3>,itk::Image<itk::DiffusionTensor3D<double>,3>
> > & gt, void * globalData, const itk::Vector<float,3> & offset) Line 142

itkAnisotropicDiffusionVesselEnhancementImageFilterTest.exe!itk::AnisotropicDiffusionVesselEnhancementImageFilter<itk::Image<double,3>,itk::Image<double,3>>::ThreadedCalculateChange(const
itk::ImageRegion<3> & regionToProcess, const itk::ImageRegion<3> &
diffusionRegionToProcess, int __formal) Line 755

itkAnisotropicDiffusionVesselEnhancementImageFilterTest.exe!itk::AnisotropicDiffusionVesselEnhancementImageFilter<itk::Image<double,3>,itk::Image<double,3>
>::CalculateChangeThreaderCallback(void * arg) Line 631

ITKCommon-4.4.dll!itk::MultiThreader::SingleMethodProxy(void * arg) Line 376
msvcr110d.dll!_callthreadstartex() Line 354
msvcr110d.dll!_threadstartex(void * ptd) Line 337
kernel32.dll!00007ffd0c3715cd() Unknown
ntdll.dll!00007ffd0c9f43d1() Unknown

It looks like a memory access violation error. I'm running ITK 4.4 and 'am
using the example dataset that the authors provide. Any pointers on how to
proceed further?

Thanks again
Prashanth


On Sun, Dec 29, 2013 at 7:54 AM, Luis Ibanez <luis.ibanez at kitware.com>wrote:

> Hi Prashanth,
>
> Two things that can help:
>
> A) Add a try / catch block around the Update() call of the filter,
>     and print out the potential error message of the exception.
>
> B) Run the filter in Debug mode, and once it crashes, capture
>      the call trace (e.g. use backtrace in GDB for example).
>
>
> In order to find the source of the problem, it will help to know if this
> was and exception being thrown, or a segmentation fault.
>
>
>     Thanks
>
>         Luis
>
>
>
>  On Fri, Dec 20, 2013 at 4:55 PM, Prashanth <prashanth.dumpuri at gmail.com>wrote:
>
>>  All,
>>     I'm trying to run itkAnisotropicDiffusionVesselEnhancementImageFilter
>> that was submitted to Insight Journal at
>> http://www.insight-journal.org/browse/publication/163
>>
>>     Since I'm using ITK 4.4, I used Dr. Ramon Casero's modifications. The
>> application crashes with an 'access violation reading location' error
>> message. Here's the exact location of the crash:
>>
>> Filename where it crashes:
>> itkAnisotropicDiffusionVesselEnhancementImageFilter.txx
>> Function in that file: CalculateChange()
>> Line in that function:  this->GetMultiThreader()->SingleMethodExecute();
>>
>> I checked Casero's modified version against the original code and the
>> only changes he made were to make the code compatible with ITK 4.x. So, the
>> crash should have nothing to do with the modification Casero made.
>>
>> What 'am I missing here? Any help will be appreciated.
>>
>> Thanks
>> Prashanth
>>
>> _____________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Kitware offers ITK Training Courses, for more information visit:
>> http://www.kitware.com/products/protraining.php
>>
>> Please keep messages on-topic and check the ITK FAQ at:
>> http://www.itk.org/Wiki/ITK_FAQ
>>
>> Follow this link to subscribe/unsubscribe:
>> http://www.itk.org/mailman/listinfo/insight-users
>>
>> _______________________________________________
>> Community mailing list
>> Community at itk.org
>> http://public.kitware.com/cgi-bin/mailman/listinfo/community
>>
>>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://public.kitware.com/pipermail/community/attachments/20131230/82675de4/attachment.htm>
-------------- next part --------------
_____________________________________
Powered by www.kitware.com

Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html

Kitware offers ITK Training Courses, for more information visit:
http://www.kitware.com/products/protraining.php

Please keep messages on-topic and check the ITK FAQ at:
http://www.itk.org/Wiki/ITK_FAQ

Follow this link to subscribe/unsubscribe:
http://www.itk.org/mailman/listinfo/insight-users