[Cmb-users] Error starting CMB v4 from superbuild

Fri Jun 5 15:33:09 EDT 2015

Hi Amanda,

A few things:

1. I have not seen your e-mail to the cmb-users list. Is it possible that you haven't joined the list yet at http://public.kitware.com/mailman/listinfo/cmb-users ? I think the list is set to only allow messages from list members, so I see Bob's replies to you but not your messages.

2. You are correct that DYLD_LIBRARY_PATH causes problems; you should use DYLD_FALLBACK_LIBRARY_PATH as Bob mentioned.

3. I have not seen things break at the place your backtrace mentions; Rob might see what's going wrong, since it appears to be dying while looking for a mesh worker. (Hi, Rob :-).

4. However, I do see that you are running the installed version of ModelBuilder (in /Users/rditlaem/Work/Applications/cmb_v4/build/install/Applications). Bob has had other issues running from the install tree, so it might be related to that. Can you try running from your build directory? (There should be a ModelBuilder.app in /Users/rditlaem/Work/Applications/cmb_v4/build/cmb/src/cmb-build/bin .)

	Thanks,
	David

> Nope, I am not setting the DYLD_LIBRARY_PATH because that causes a problem with the ImageIO lib.
> 
>>> dyld: Symbol not found: __cg_png_create_info_struct
>>>  Referenced from: /System/Library/Frameworks/ImageIO.framework/Versions/A/ImageIO
>>>  Expected in: /Users/rditlaem/Work/Applications/cmb_v4/build/install/lib//libPng.dylib
>>> in /System/Library/Frameworks/ImageIO.framework/Versions/A/ImageIO
>>> Trace/BPT trap
> David Thompson said to set the DYLD_FALLBACK_LIBRARY_PATH instead. Here’s the error in lldb:
> 
> Process 59213 launched: '/Users/rditlaem/Work/Applications/cmb_v4/build/install/Applications/ModelBuilder.app/Contents/MacOS/ModelBuilder' (x86_64)
> 
> Find Session      cmb_forwarding
> Find Session      discrete
> Find Session      exodus
> Find Session      native
> Find Session      remus_remote
> Process 59213 stopped
> * thread #1: tid = 0x97ab9, 0x000000011247e5f9 libstdc++.6.dylib`std::string::_Rep::_M_dispose(std::allocator<char> const&) (.part.23) + 3, queue = 'com.apple.main-thread', stop reason = EXC_BAD_ACCESS (code=1, address=0xfffffffffffffff8)
>     frame #0: 0x000000011247e5f9 libstdc++.6.dylib`std::string::_Rep::_M_dispose(std::allocator<char> const&) (.part.23) + 3
> libstdc++.6.dylib`std::string::_Rep::_M_dispose(std::allocator<char> const&) (.part.23) + 3:
> -> 0x11247e5f9:  lock   
>    0x11247e5fa:  xaddl  %eax, 0x10(%rdi)
>    0x11247e5fe:  testl  %eax, %eax
>    0x11247e600:  jg     0x11247e607               ; std::string::_Rep::_M_dispose(std::allocator<char> const&) (.part.23) + 17
> 
> And the backtrace from lldb:
> 
> * thread #1: tid = 0x97ab9, 0x000000011247e5f9 libstdc++.6.dylib`std::string::_Rep::_M_dispose(std::allocator<char> const&) (.part.23) + 3, queue = 'com.apple.main-thread', stop reason = EXC_BAD_ACCESS (code=1, address=0xfffffffffffffff8)
>   * frame #0: 0x000000011247e5f9 libstdc++.6.dylib`std::string::_Rep::_M_dispose(std::allocator<char> const&) (.part.23) + 3
>     frame #1: 0x000000011247a682 libstdc++.6.dylib`std::string::assign(std::string const&) + 130
>     frame #2: 0x00000001123e4cfe libboost_filesystem.dylib`boost::filesystem::detail::directory_iterator_construct(boost::filesystem::directory_iterator&, boost::filesystem::path const&, boost::system::error_code*) [inlined] std::string::operator=(__str=0x00007fff5fbfbcb0, this=0x00000001211d3d40) + 350 at basic_string.h:547
>     frame #3: 0x00000001123e4cf3 libboost_filesystem.dylib`boost::filesystem::detail::directory_iterator_construct(boost::filesystem::directory_iterator&, boost::filesystem::path const&, boost::system::error_code*) [inlined] boost::filesystem::path::operator=(p=0x00007fff5fbfbcb0, this=0x00000001211d3d40)
>     frame #4: 0x00000001123e4cf3 libboost_filesystem.dylib`boost::filesystem::detail::directory_iterator_construct(boost::filesystem::directory_iterator&, boost::filesystem::path const&, boost::system::error_code*) [inlined] boost::filesystem::directory_entry::assign(symlink_st=<unavailable>, st=<unavailable>, p=0x00007fff5fbfbcb0, this=0x00000001211d3d40)
>     frame #5: 0x00000001123e4cf3 libboost_filesystem.dylib`boost::filesystem::detail::directory_iterator_construct(it=0x00007fff5fbfbec0, p=<unavailable>, ec=0x0000000000000000) + 339
>     frame #6: 0x000000011260b6a7 libRemusServer.dylib`boost::filesystem::directory_iterator::directory_iterator(this=0x00007fff5fbfbec0, p=0x00007fff5fbfc128) + 103 at operations.hpp:793
>     frame #7: 0x0000000112602d5d libRemusServer.dylib`boost::filesystem::directory_iterator::directory_iterator(this=0x00007fff5fbfbec0, p=0x00007fff5fbfc128) + 29 at operations.hpp:793
>     frame #8: 0x00000001126014df libRemusServer.dylib`remus::server::detail::WorkerFinder::parseDirectory(this=0x00007fff5fbfc370, dir=0x00007fff5fbfc128) + 95 at WorkerFinder.cxx:55
>     frame #9: 0x0000000112601388 libRemusServer.dylib`remus::server::detail::WorkerFinder::WorkerFinder(this=0x00007fff5fbfc370, parser=0x0000000120cb6138, ext=0x0000000120cb6120) + 648 at WorkerFinder.cxx:35
>     frame #10: 0x0000000112601dd5 libRemusServer.dylib`remus::server::detail::WorkerFinder::WorkerFinder(this=0x00007fff5fbfc370, parser=0x0000000120cb6138, ext=0x0000000120cb6120) + 37 at WorkerFinder.cxx:36
>     frame #11: 0x000000011264502b libRemusServer.dylib`remus::server::WorkerFactory::WorkerFactory(this=0x0000000120cb60e0) + 331 at WorkerFactory.cxx:185
>     frame #12: 0x00000001126452a5 libRemusServer.dylib`remus::server::WorkerFactory::WorkerFactory(this=0x0000000120cb60e0) + 21 at WorkerFactory.cxx:191
>     frame #13: 0x00000001017e15d8 libvtkCMBMeshing-6.3.1.dylib`vtkCMBMeshServerLauncher::vtkCMBMeshServerLauncher(this=0x0000000120cb6080) + 136 at vtkCMBMeshServerLauncher.cxx:129
>     frame #14: 0x00000001017e1545 libvtkCMBMeshing-6.3.1.dylib`vtkCMBMeshServerLauncher::vtkCMBMeshServerLauncher(this=0x0000000120cb6080) + 21 at vtkCMBMeshServerLauncher.cxx:151
>     frame #15: 0x00000001017e14fa libvtkCMBMeshing-6.3.1.dylib`vtkCMBMeshServerLauncher::New() + 42 at vtkCMBMeshServerLauncher.cxx:121
>     frame #16: 0x0000000100dd1841 libCMB_Plugin.dylib`vtkCMBMeshServerLauncherClientServerNewCommand((null)=0x0000000000000000) + 17 at vtkCMBMeshServerLauncherClientServer.cxx:13
>     frame #17: 0x000000010cf7c1e3 libvtkClientServer-pv4.3.1.dylib`vtkClientServerInterpreter::NewInstance(this=0x00000001128660a0, classname=0x0000000120d97f70) + 659 at vtkClientServerInterpreter.cxx:1068
>     frame #18: 0x000000010a0a801b libvtkPVServerImplementationCore-pv4.3.1.dylib`vtkSIProxy::CreateVTKObjects(this=0x0000000120cb5d30, message=0x00007fff5fbfdde8) + 5403 at vtkSIProxy.cxx:306
>     frame #19: 0x000000010a0a4298 libvtkPVServerImplementationCore-pv4.3.1.dylib`vtkSIProxy::Push(this=0x0000000120cb5d30, message=0x00007fff5fbfdde8) + 72 at vtkSIProxy.cxx:115
>     frame #20: 0x000000010a04c4fe libvtkPVServerImplementationCore-pv4.3.1.dylib`vtkPVSessionCore::PushStateInternal(this=0x0000000112866030, message=0x00007fff5fbfdde8) + 4270 at vtkPVSessionCore.cxx:486
>     frame #21: 0x000000010a04c79f libvtkPVServerImplementationCore-pv4.3.1.dylib`vtkPVSessionCore::PushState(this=0x0000000112866030, message=0x00007fff5fbfdde8) + 623 at vtkPVSessionCore.cxx:529
>     frame #22: 0x000000010a046e6a libvtkPVServerImplementationCore-pv4.3.1.dylib`vtkPVSessionBase::PushState(this=0x0000000117045210, msg=0x00007fff5fbfdde8) + 74 at vtkPVSessionBase.cxx:142
>     frame #23: 0x0000000109d68dbf libvtkPVServerManagerCore-pv4.3.1.dylib`vtkSMSession::PushState(this=0x0000000117045210, msg=0x00007fff5fbfdde8) + 63 at vtkSMSession.cxx:135
>     frame #24: 0x0000000109d58609 libvtkPVServerManagerCore-pv4.3.1.dylib`vtkSMRemoteObject::PushState(this=0x0000000120cb44b0, msg=0x00007fff5fbfdde8) + 169 at vtkSMRemoteObject.cxx:137
>     frame #25: 0x0000000109ce774f libvtkPVServerManagerCore-pv4.3.1.dylib`vtkSMProxy::CreateVTKObjects(this=0x0000000120cb44b0) + 4735 at vtkSMProxy.cxx:788
>     frame #26: 0x0000000109ce5089 libvtkPVServerManagerCore-pv4.3.1.dylib`vtkSMProxy::UpdateVTKObjects(this=0x0000000120cb44b0) + 41 at vtkSMProxy.cxx:600
>     frame #27: 0x000000010036bd76 libcmbAppCommon.dylib`qtCMBMeshingMonitor::launchLocalMeshServer() + 134 at qtCMBMeshingMonitor.cxx:236
>     frame #28: 0x0000000100323cbe libcmbAppCommon.dylib`pqCMBCommonMainWindowCore::launchLocalMeshingService(this=0x00000001128ab220) + 62 at pqCMBCommonMainWindowCore.cxx:661
>     frame #29: 0x0000000100028870 ModelBuilder`pqCMBModelBuilderMainWindow::initializeApplication(this=0x0000000112e05200) + 5888 at pqCMBModelBuilderMainWindow.cxx:257
>     frame #30: 0x0000000100027096 ModelBuilder`pqCMBModelBuilderMainWindow::pqCMBModelBuilderMainWindow(this=0x0000000112e05200) + 134 at pqCMBModelBuilderMainWindow.cxx:141
>     frame #31: 0x0000000100029a65 ModelBuilder`pqCMBModelBuilderMainWindow::pqCMBModelBuilderMainWindow(this=0x0000000112e05200) + 21 at pqCMBModelBuilderMainWindow.cxx:150
>     frame #32: 0x0000000100025533 ModelBuilder`pqModelBuilderInitializer::Initialize(this=0x00007fff5fbff810, argc=1, argv=0x00007fff5fbff898) + 1395 at pqModelBuilderInitializer.cxx:128
>     frame #33: 0x0000000100024bb3 ModelBuilder`main(argc=1, argv=0x00007fff5fbff898) + 371 at ModelBuilder_main.cxx:107
>     frame #34: 0x00007fff8adf05fd libdyld.dylib`start + 1
>     frame #35: 0x00007fff8adf05fd libdyld.dylib`start + 1