[Cmb-users] CMB binary doesn't work on my RHEL6

[Robert Maynard]

On Wed, Feb 25, 2015 at 12:29 PM, Ondřej Čertík <ondrej.certik at gmail.com> wrote:
> Hi Andy, Robert and Robert,
>
> Thanks for the replies. Do you know when you will upload a new binary?
>
> In the meantime I tried to compile from source using
> https://github.com/Kitware/RGG.
> Once I figure this out, I'll add it to Hashdist
> (https://hashdist.github.io/). We actually have pretty much all the
> dependencies, except perhaps Remus, I'll add it in.

Last year I wrote a hashstack recipe for most of cmb which can be
found at https://github.com/robertmaynard/hashstack/tree/cmb-profile/
, it does include Remus.

>
> Is my understanding correct, that if I want to use the superbuild (as
> a temporary solution before I add all the dependencies to Hashdist), I
> first do:
>
> cd superbuild
> cmake .
> make
>
> Do I need to install it afterwards and then somehow point the cmake to
> it from the root directory? Once I understand that, I'll be happy to
> improve the README with some instructions.

Basically that is correct, but the superbuild will install everything
into <build_dir>/install/ (include/lib/bin).
So you should be able to add <build_dir>/install as a
CMAKE_PREFIX_PATH to find anything it has built.


>
>
> Ondrej
>
> On Wed, Feb 25, 2015 at 6:45 AM, Robert Maynard
> <robert.maynard at kitware.com> wrote:
>> Hi,
>>
>> I believe the issue was tracked down to be caused by netcdf dap
>> support which implicitly used system libcurl without our knowledge. To
>> re-iterate what Bob said, we have fixed the issue and going forward we
>> won't link to libcurl.
>>
>> On Tue, Feb 24, 2015 at 9:45 PM, Robert Michael O'Bara
>> <bob.obara at kitware.com> wrote:
>>> I Believe that this has been fixed in the latest superbuild since CMB
>>> doesn’t use curl.
>>>
>>> Bob
>>>
>>> Robert M. O'Bara, MEng.
>>> Assistant Director of Scientific Computing
>>>
>>> Kitware Inc.
>>> 28 Corporate Drive
>>> Suite 101
>>> Clifton Park, NY 12065
>>>
>>> Phone: (518) 881- 4931
>>>
>>>
>>>
>>>
>>> On Feb 24, 2015, at 9:28 PM, Andy Bauer <andy.bauer at kitware.com> wrote:
>>>
>>> Hi Ondrej,
>>>
>>> You're not the first to hit this issue. I still appreciate the report
>>> though. The other user hacked around this by putting in a link from
>>> /usr/lib/libcurl.so.3 to /usr/lib/libcurl.so.4. It's not a satisfying fix
>>> but if you're eager to try CMB out it should get you going.
>>>
>>> I'll push for a fix in the next installer we make for CMB.
>>>
>>> Regards,
>>> Andy
>>>
>>> On Tue, Feb 24, 2015 at 5:52 PM, Ondřej Čertík <ondrej.certik at gmail.com>
>>> wrote:
>>>>
>>>> Hi,
>>>>
>>>> As I mentioned during the call to Andy, I wanted to try CMB, so I went
>>>> here:
>>>>
>>>> http://www.computationalmodelbuilder.org/download/
>>>>
>>>> and did:
>>>>
>>>> $ wget
>>>> http://www.computationalmodelbuilder.org/files/CMBSuite-3.0.0-Linux-x86_64.tar.gz
>>>> $ tar xaf CMBSuite-3.0.0-Linux-x86_64.tar.gz
>>>> $ cd CMBSuite-3.0.0-Linux-x86_64
>>>> $ ./bin/MeshViewer
>>>> /tmp/CMBSuite-3.0.0-Linux-x86_64/lib/cmb-3.0/MeshViewer: error while
>>>> loading shared libraries: libcurl.so.3: cannot open shared object
>>>> file: No such file or directory
>>>>
>>>> I have libcurl.so.4 here:
>>>>
>>>> $ ls /usr/lib/libcurl.so.*
>>>> /usr/lib/libcurl.so.4  /usr/lib/libcurl.so.4.1.1
>>>>
>>>> But not 3. I think you should ship the required libraries like
>>>> libcurl.so.3 in lib/cmb-3.0/.
>>>>
>>>> Ondrej
>>>> _______________________________________________
>>>> Cmb-users mailing list
>>>> Cmb-users at computationalmodelbuilder.org
>>>> http://public.kitware.com/mailman/listinfo/cmb-users
>>>
>>>
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>>>
>>>
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