MantisBT - Visomics
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ID	Project	Category	View Status	Date Submitted	Last Update
0012772	Visomics	[All Projects] General	public	2012-01-06 15:43	2012-01-06 15:43

Reporter	Jean-Christophe Fillion-Robin
Assigned To
Priority	normal	Severity	minor	Reproducibility	have not tried
Status	new	Resolution	open
Platform		OS		OS Version

Summary	0012772: Decouple analysis data from user-created Analysis instances
Description	From Brian email - July 19th - Many of the best planned features require data from multiple Analysis * Volcano plot already does this: fold change + t-test * Most of Wes's ideas about synergies between analysis and pathways require this - It would be great to have a common pool of shared analysis outputs / data available - When a user runs an Analysis, it could fetch from this shared data. - Using or contributing to the pool is optional. Existing Analysis can continue to compute private data. - The shared data could be computed lazily, as it's needed by a user-run Analysis. - Once computed the first time, the data would remain the pool for fast access later. - Some pieces of shared data, like pathway info, could be generated / prefetched in the background, to make it quickly ready when needed. - Possible issues could arise if we modify the underlying data. * We wanted to be able to hide unimportant Analytes / Experiments. This could invalidate certain existing types of multivariate analysis outputs. - Memory issues could arise with very large data sets. - Some types of data may have analysis parameters associated with them. We could store separate data instances for each unique set of parameters (be lazy with this, of course).
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Date Modified	Username	Field	Change
2012-01-06 15:43	Matthew Bowman	New Issue

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