Directory Modules/Tractography/Seeding/

Directory Created:
2006-12-27 13:04
Total Files:
4
Deleted Files:
27
Lines of Code:
608

[root]/Modules/Tractography/Seeding

Lines of Code

Modules/Tractography/Seeding/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 118 (100.0%) 1048 (100.0%) 8.8
rjosest 41 (34.7%) 434 (41.4%) 10.5
alexy 49 (41.5%) 324 (30.9%) 6.6
pieper 12 (10.2%) 189 (18.0%) 15.7
barre 6 (5.1%) 91 (8.7%) 15.1
millerjv 8 (6.8%) 10 (1.0%) 1.2
jcfr 1 (0.8%) 0 (0.0%) 0.0
domibel 1 (0.8%) 0 (0.0%) 0.0

Most Recent Commits

jcfr 2009-12-07 23:15 Rev.: 11209

ENH: Update CMakeLists.txt - CMake 2.6 is now required

The following line have been added:

CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
IF(COMMAND CMAKE_POLICY)
CMAKE_POLICY(SET CMP0003 NEW)
ENDIF(COMMAND CMAKE_POLICY)
MARK_AS_ADVANCED(CMAKE_BACKWARDS_COMPATIBILITY)

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (changed)
domibel 2009-08-16 11:14 Rev.: 10267

ENH: Version numbering for shared libraries

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (changed)
millerjv 2009-07-28 13:04

BUG: cleaned out old targets that kept current targets from building

0 lines of code changed in 4 files:

  • Modules/Tractography/Seeding: CMakeLists.txt (-46), vtkSlicerTractographySeeding.h (del), vtkSlicerTractographySeedingConfigure.h.in (del), vtkSlicerTractographySeedingWin32Header.h (del)
alexy 2009-06-25 14:07 Rev.: 9793

ENH: added integration step for label seeding

16 lines of code changed in 2 files:

  • Modules/Tractography/Seeding: Seeding.cxx (+2 -1), Seeding.xml (+14)
alexy 2009-06-24 10:19 Rev.: 9778

ENH: ROI seeding of streamlines allows arbitrary ROI volume (different voxels than tensor). However external transforms applied to the volumes are still ignored because not passed to CLI.

29 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (+29 -9)
pieper 2009-06-17 08:37 Rev.: 9715

STYLE: fix spelling errors identified by Dominique as part of the debian checkin process

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (changed)
pieper 2009-04-06 07:04 Rev.: 9067

BUG: remove stray backslash character in xml file

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (changed)
alexy 2009-04-05 12:45 Rev.: 9058

ENH: changed ROI seeding to Label seeding

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (changed)
alexy 2009-04-05 12:03 Rev.: 9056

ENH: changed ROI seeding to Label seeding

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (changed)
pieper 2009-03-31 17:15 Rev.: 9014

BUG: fix typos and naming issues for Tractography

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (changed)
pieper 2009-03-26 10:29 Rev.: 8979

BUG: change Measurement to Measure to comply with the Westin published naming conventions

6 lines of code changed in 2 files:

  • Modules/Tractography/Seeding: Seeding.cxx (+2 -2), Seeding.xml (+4 -4)
pieper 2009-03-19 15:28 Rev.: 8917

BUG: put tractograpy modules into correct category

1 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (+1 -1)
pieper 2009-03-19 14:44 Rev.: 8915

ENH: fix module menu layout to match the documentation on the wiki

1 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (+1 -1)
barre 2008-05-27 17:44 Rev.: 6889

ENH: Plugins and Modules have specific location for their binairies/dll, different from the usual bin/ and lib/ (i.e. lib/Slicer3/Plugins, lib/Slicer3/Modules). This was achieved by setting LIBRARY_OUTPUT_PATH and EXECUTABLE_OUTPUT_PATH from the slicer3_set_default_modules_output_path and slicer3_set_default_plugins_output_path macro, but it is a dangerous practice to override a global variable, as it propagates to subtrees. As a result, SlicerTractographySeeding, which combines a module and a CLP in the same CMakeLists, was not built to the proper directory; ExtractSkeleton was not output in the right location either, and several tests ended up in Plugins instead of bin/ (GaussianBlurImageFilterTest, OrientImageTest). Fix this by creating a macro that will set the LIBRARY_OUTPUT_DIRECTORY and RUNTIME_OUTPUT_DIRECTORY explicitly on a *target* basis, using SET_TARGET_PROPERTIES. This removes the side-effects described above.

3 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+3 -5)
barre 2008-05-26 10:17 Rev.: 6851

ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.

2 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+2 -14)
barre 2008-05-20 02:29 Rev.: 6772

ENH: Slicer3 Spring Installation Clean Up

86 lines of code changed in 3 files:

  • Modules/Tractography/Seeding: CMakeLists.txt (+83 -106), vtkSlicerTractographySeeding.h (+2 -2), vtkSlicerTractographySeedingConfigure.h.in (+1 -10)
millerjv 2008-02-02 14:55 Rev.: 5677

BUG: Configuration changes needed now that there is a SlicerBaseCLI library that holds utility code.

1 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+1 -1)
millerjv 2008-01-31 12:24 Rev.: 5665

ENH: Changes in the Slicer3 installation layout to simplify navigation. Most things will now try install themselves under <Installation Directory>/lib/<Package> or <Installation Directory>/include/<Package>. For example, <Installation Directory>/lib/Slicer3, <Installation Directory>/lib/MRML, <Installation Directory>/lib/ModuleDescriptionParser. This allows setting include and library paths consistently using ../<SomeOtherPackage> or ../../include/<SomeOtherPackage>, etc.

2 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+2 -2)
millerjv 2008-01-23 10:07 Rev.: 5576

ENH: More changes to the configurations of GenerateCLP to streamline its use and installation. Thanks to Hans Johnson for working through many of these issues.

3 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+3 -6)
alexy 2007-12-20 18:34 Rev.: 5311

ENH: added transform to fiducial seeding, re-worked ROI seeding algorithm to align ROI and tensor

9 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (+9 -9)
alexy 2007-12-14 16:29 Rev.: 5218

ENH: added label value and scalar type check to vtkDiffusionTensorMathematics classes

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (changed)
alexy 2007-12-10 18:27 Rev.: 5145

ENH: fixed misc dti/tractography bugs

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (changed)
alexy 2007-12-06 17:01 Rev.: 5080

ENH: added controls to Modules/Tractography/FiducialSeeding/vtkSlicerTractographyFiducialSeeding

0 lines of code changed in 2 files:

  • Modules/Tractography/Seeding: Seeding.cxx (changed), Seeding.xml (changed)
alexy 2007-11-30 11:55 Rev.: 5012

ENH: moved tractography seeding core to vtkTeel lib

0 lines of code changed in 25 files:

  • Modules/Tractography/Seeding: CMakeLists.txt (changed), vtkBSplineInterpolateImageFunction.cxx (del), vtkBSplineInterpolateImageFunction.h (del), vtkHyperPointandArray.cxx (del), vtkHyperPointandArray.h (del), vtkHyperStreamlineDTMRI.cxx (del), vtkHyperStreamlineDTMRI.h (del), vtkHyperStreamlineTeem.cxx (del), vtkHyperStreamlineTeem.h (del), vtkImageGetTensorComponents.cxx (del), vtkImageGetTensorComponents.h (del), vtkImageSetTensorComponents.cxx (del), vtkImageSetTensorComponents.h (del), vtkPreciseHyperArray.h (del), vtkPreciseHyperPoint.h (del), vtkPreciseHyperStreamline.cxx (del), vtkPreciseHyperStreamline.h (del), vtkPreciseHyperStreamlinePoints.cxx (del), vtkPreciseHyperStreamlinePoints.h (del), vtkSeedTracts.cxx (del), vtkSeedTracts.h (del), vtkTensorImplicitFunctionToFunctionSet.cxx (del), vtkTensorImplicitFunctionToFunctionSet.h (del), vtkTractographyPointAndArray.cxx (del), vtkTractographyPointAndArray.h (del)
alexy 2007-11-17 15:25 Rev.: 4866

ENH: ROI tracts selection and better seeding defaults

14 lines of code changed in 3 files:

  • Modules/Tractography/Seeding: Seeding.cxx (+1 -1), Seeding.xml (+1 -1), vtkSeedTracts.cxx (+12 -4)
alexy 2007-11-09 16:22 Rev.: 4799

ENH: added option to write tracks to disk

121 lines of code changed in 4 files:

  • Modules/Tractography/Seeding: Seeding.cxx (+17 -5), Seeding.xml (+26), vtkSeedTracts.cxx (+64 -1), vtkSeedTracts.h (+14)
alexy 2007-10-30 22:42 Rev.: 4748

ENH: tractography fix

18 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (+18 -2)
pieper 2007-10-29 15:51 Rev.: 4739

ENH: change the default seed spacing to 3 to avoid allocating too much memory on windows for test cases - need better memory handling in general

1 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (+1 -1)
alexy 2007-10-29 12:40 Rev.: 4737

ENH reworked fiber bundle display and fixed tractography seeding

56 lines of code changed in 3 files:

  • Modules/Tractography/Seeding: Seeding.cxx (+35 -6), Seeding.xml (+3 -2), vtkSeedTracts.cxx (+18 -8)
alexy 2007-10-24 22:01 Rev.: 4699

ENH: added README

56 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: README.txt (new 56)
millerjv 2007-10-09 11:02 Rev.: 4569

ENH: Update INSTALL_* commands to INSTALL() commands.

4 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+4 -1)
alexy 2007-09-24 22:28 Rev.: 4425

ENH: misc fixes for scene etc.

3 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: vtkSeedTracts.cxx (+3 -3)
pieper 2007-08-28 08:21 Rev.: 4139

COMP: remove USE_TEEM defines from various parts of the code and cmake files - teem is now required

27 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (+27 -34)
alexy 2007-08-27 19:53 Rev.: 4136

ENH: tensor math updates and other misc changes

2 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (+2 -2)
pieper 2007-07-02 12:14 Rev.: 3781

COMP: move resources to top level so they can be used by command line modules that are bundled with Modules

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (changed)
rjosest 2007-06-29 07:59 Rev.: 3752

ENH: Adding RASToIJK to ROI volume. ROI mask has to be Short

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.cxx (changed)
rjosest 2007-06-29 07:57 Rev.: 3751

ENH: Moving interface to VTK 5. RequestData instead of Execute

0 lines of code changed in 3 files:

  • Modules/Tractography/Seeding: vtkHyperStreamlineDTMRI.cxx (changed), vtkHyperStreamlineDTMRI.h (changed), vtkHyperStreamlineTeem.cxx (changed)
rjosest 2007-06-29 07:56 Rev.: 3750

ENH: Defining output as fiberbundle. Comment ROI volume until we know how to do it default

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: Seeding.xml (changed)
rjosest 2007-06-25 21:59 Rev.: 3680

ENH: Adding Whole Brain Seeding as Command Line Mdoule

0 lines of code changed in 1 file:

  • Modules/Tractography/Seeding: CMakeLists.txt (changed)
rjosest 2007-06-25 21:58

ENH: Adding Command Line Module for whole brain seeding

370 lines of code changed in 2 files:

  • Modules/Tractography/Seeding: Seeding.cxx (new 198), Seeding.xml (new 172)

(7 more)

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