[root]/Modules/Tractography/FiducialSeeding
Testing
(1 files, 0 lines)

| Author | Changes | Lines of Code | Lines per Change |
|---|---|---|---|
| Totals | 120 (100.0%) | 2317 (100.0%) | 19.3 |
| alexy | 78 (65.0%) | 2232 (96.3%) | 28.6 |
| barre | 5 (4.2%) | 65 (2.8%) | 13.0 |
| pieper | 16 (13.3%) | 13 (0.6%) | 0.8 |
| tgl | 10 (8.3%) | 3 (0.1%) | 0.3 |
| millerjv | 1 (0.8%) | 2 (0.1%) | 2.0 |
| kerstin | 4 (3.3%) | 1 (0.0%) | 0.2 |
| freudling | 1 (0.8%) | 1 (0.0%) | 1.0 |
| jcfr | 2 (1.7%) | 0 (0.0%) | 0.0 |
| hliu | 2 (1.7%) | 0 (0.0%) | 0.0 |
| domibel | 1 (0.8%) | 0 (0.0%) | 0.0 |
ENH: In CMakeLists.txt, change deprecated SUBDIRS command into ADD_SUBDIRECTORY
See http://cmake.org/cmake/help/cmake-2-8-docs.html#command:subdirs
when subdirs command was taking a list of directory, change it
using the following pattern:
Before:
subdirs(sagarmatha kumbhu eiger)
After:
SET(dirs
sagarmatha
kumbhu
eiger
)
FOREACH(dir ${dirs})
ADD_SUBDIRECTORY(${dir})
ENDFOREACH(dir)
0 lines of code changed in 1 file:
ENH: Update CMakeLists.txt - CMake 2.6 is now required
The following line have been added:
CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
IF(COMMAND CMAKE_POLICY)
CMAKE_POLICY(SET CMP0003 NEW)
ENDIF(COMMAND CMAKE_POLICY)
MARK_AS_ADVANCED(CMAKE_BACKWARDS_COMPATIBILITY)
0 lines of code changed in 1 file:
ENH: Version numbering for shared libraries
0 lines of code changed in 1 file:
STYLE: cleaned up code.
0 lines of code changed in 1 file:
BUG-FIXED: put back the polyline creation deleted in the previous check-in
0 lines of code changed in 1 file:
ENH: added a new module - IGTNavigation.
0 lines of code changed in 1 file:
BUG-FIXED: fixed typos
0 lines of code changed in 1 file:
BUG: fix typos and naming issues for Tractography
0 lines of code changed in 1 file:
BUG-FIXED: made fiducial seeding pay attention to integration step parameter
0 lines of code changed in 1 file:
BUG: change Measurement to Measure to comply with the Westin published naming conventions
6 lines of code changed in 2 files:
BUG: put tractograpy modules into correct category
1 lines of code changed in 1 file:
STYLE: fix indents
4 lines of code changed in 1 file:
ENH: fix module menu layout to match the documentation on the wiki
1 lines of code changed in 1 file:
BUG-FIXED: made default volume rendering to be raycaster, only allow scalar volume selection.
Made Fiducial Seeding defaults as requested by JJ.
8 lines of code changed in 2 files:
ENH: added Line/Tube selection to Fiducial Seeding
BUG 475
119 lines of code changed in 6 files:
BUG-FIXED: 498 Handle overtire of exitsting track nodes
8 lines of code changed in 1 file:
ENH: performance optimization for FiducalSeeding
12 lines of code changed in 1 file:
ENH: added help and about pages. Fixed loading man made MRML scene with partial volume information
3 lines of code changed in 1 file:
BUG: fix leak by deleting newly create storage node
1 lines of code changed in 1 file:
ENH: added seeding selected, name fibers after the source
0 lines of code changed in 6 files:
BUG: avoid 0 value for curvature scale
0 lines of code changed in 1 file:
COMP: moved vtkMaskPoints instance into module logic so points will not get randomized everytime a parameter is changed. Required adding a SetModuleLogic method and instance variable - why were these not present before, one asks...). Additional cleanups and typo fixes
0 lines of code changed in 4 files:
BUG: avoid setting output spacing directly on image data (could be evil!) by using ImageChangeInformation
0 lines of code changed in 1 file:
ENH: added new functionality to tractography seeding, fixed snapshot node storing internal nodes in the scene.
0 lines of code changed in 6 files:
ENH: added max number of seeding samples
0 lines of code changed in 6 files:
ENH: added seeding from model points
0 lines of code changed in 4 files:
ENH: fixed FiducialSeeding to save/restore parameters
0 lines of code changed in 2 files:
ENH: added tractography fiducial seeding parameter node
0 lines of code changed in 4 files:
BUG: avoid 0 as stopping value
0 lines of code changed in 1 file:
ENH: merged demianVolumeGlyph-Simple branch
462 lines of code changed in 3 files:
ENH tractography is now loadable
0 lines of code changed in 4 files:
ENH: added tractography fiducial seeding region
0 lines of code changed in 3 files:
BUG: fix a few typos in the multi-seeding case
0 lines of code changed in 1 file:
ENH: added seeding resgion to tractography
0 lines of code changed in 4 files:
ENH: prototype of grid of seed points around current fiducial
0 lines of code changed in 1 file:
BUG: don't remove items from a container while iterating
14 lines of code changed in 1 file:
ENH: Plugins and Modules have specific location for their binairies/dll, different from the usual bin/ and lib/ (i.e. lib/Slicer3/Plugins, lib/Slicer3/Modules). This was achieved by setting LIBRARY_OUTPUT_PATH and EXECUTABLE_OUTPUT_PATH from the slicer3_set_default_modules_output_path and slicer3_set_default_plugins_output_path macro, but it is a dangerous practice to override a global variable, as it propagates to subtrees. As a result, SlicerTractographySeeding, which combines a module and a CLP in the same CMakeLists, was not built to the proper directory; ExtractSkeleton was not output in the right location either, and several tests ended up in Plugins instead of bin/ (GaussianBlurImageFilterTest, OrientImageTest). Fix this by creating a macro that will set the LIBRARY_OUTPUT_DIRECTORY and RUNTIME_OUTPUT_DIRECTORY explicitly on a *target* basis, using SET_TARGET_PROPERTIES. This removes the side-effects described above.
2 lines of code changed in 1 file:
ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.
1 lines of code changed in 1 file:
ENH: Slicer3 Spring Installation Clean Up
62 lines of code changed in 3 files:
ENH: adding dependency checking (but not sorting) to LoadableModule lib. Adding EMSegment, MRAblation, RealTimeImaging, VolumeRendering, WFEngineModule, LabelStatistics as loadable modules
0 lines of code changed in 2 files:
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