StatSVN - Directory Modules/

[root]/Modules

AtlasCreator (11 files, 2307 lines)

BaseClasses (0 files, 0 lines)

Testing (0 files, 0 lines)

ChangeTracker (12 files, 3777 lines)

CommandLineApplication (3 files, 1055 lines)

CommandLineApplicationNew (3 files, 963 lines)

DeformableMetric (3 files, 269 lines)

Filters (10 files, 4525 lines)

ImageData (2 files, 201 lines)

Tcl (2 files, 2250 lines)

Testing (2 files, 93 lines)

TumorDiameterEstimation (0 files, 0 lines)

Code (0 files, 0 lines)

LookAt (0 files, 0 lines)

Data (0 files, 0 lines)

Wizard (16 files, 5395 lines)

ClipModel (6 files, 589 lines)

CommandLineModule (10 files, 4892 lines)

Testing (1 files, 58 lines)

HelloSlicer (3 files, 129 lines)

HelloWorld (0 files, 0 lines)

CustomLayout (0 files, 0 lines)

ImageData (0 files, 0 lines)

Resources (0 files, 0 lines)

DistanceMapFiducials (6 files, 507 lines)

DistanceMapModel (0 files, 0 lines)

DistanceTransformModel (6 files, 559 lines)

EMSegment (15 files, 9241 lines)

Algorithm (43 files, 19913 lines)

CommandLineApplication (7 files, 1646 lines)

MRML (30 files, 6547 lines)

Registration (7 files, 2147 lines)

Testing (10 files, 2803 lines)

TestData (1 files, 26 lines)

MiscVolumeData (6 files, 39 lines)

TutorialTest (4 files, 558 lines)

StandardData (4 files, 26 lines)

VolumeData (14 files, 97 lines)

TutorialTest2 (5 files, 1010 lines)

StandardData (10 files, 65 lines)

VolumeData (4 files, 26 lines)

Atlas (24 files, 156 lines)

Target (8 files, 52 lines)

Wizard (27 files, 13316 lines)

Help (0 files, 0 lines)

Editor (26 files, 7271 lines)

ImageData (142 files, 0 lines)

Testing (1 files, 50 lines)

ExtractSubvolume (3 files, 230 lines)

ExtractSubvolumeROI (6 files, 1061 lines)

ImageData (2 files, 201 lines)

FastMarchingSegmentation (6 files, 1099 lines)

ImageData (2 files, 201 lines)

FetchMI (43 files, 16516 lines)

ImageData (21 files, 0 lines)

Resources (1 files, 266 lines)

Tcl (1 files, 196 lines)

FourDAnalysis (14 files, 6463 lines)

Python (10 files, 1088 lines)

Testing (1 files, 42 lines)

FourDImage (12 files, 5027 lines)

ImageData (3 files, 0 lines)

Resources (1 files, 32 lines)

GradientAnisotropicDiffusionFilter (13 files, 1556 lines)

Testing (1 files, 0 lines)

IGTNavigation (13 files, 1417 lines)

Wizard (12 files, 1683 lines)

IGTPlanning (12 files, 1336 lines)

Wizard (14 files, 2203 lines)

IntensityNormalization (13 files, 1716 lines)

Testing (1 files, 0 lines)

MRAblation (14 files, 1698 lines)

MRIBiasFieldCorrection (19 files, 6489 lines)

CommandLineApplication (3 files, 440 lines)

Testing (2 files, 69 lines)

Measurements (23 files, 7349 lines)

Meshing (2 files, 74 lines)

Adapter (15 files, 1514 lines)

BoundingBox (0 files, 0 lines)

BuildingBlock (147 files, 43684 lines)

Resources (185 files, 31886 lines)

CommandLine (0 files, 0 lines)

VoxelMeshingModule (0 files, 0 lines)

ImageData (0 files, 0 lines)

Resources (0 files, 0 lines)

Common (106 files, 23543 lines)

Filter (117 files, 31369 lines)

IA_FEMesh (11 files, 1104 lines)

IO (17 files, 3056 lines)

Mesh (19 files, 3955 lines)

Testing (4 files, 1059 lines)

Widgets (40 files, 23002 lines)

ModelIntoLabelVolume (6 files, 627 lines)

Testing (1 files, 146 lines)

ModelMirror (13 files, 2109 lines)

ImageData (6 files, 0 lines)

Resources (1 files, 206 lines)

NeuroNav (8 files, 2359 lines)

OpenCV (11 files, 2215 lines)

OpenIGTLink (0 files, 0 lines)

igtlutil (0 files, 0 lines)

OpenIGTLinkIF (20 files, 7562 lines)

PETCTFusion (11 files, 7003 lines)

PatientToImageRegistration (8 files, 1937 lines)

ProstateNav (33 files, 7316 lines)

Wizard (12 files, 3072 lines)

newmat (70 files, 25398 lines)

Python (18 files, 4066 lines)

StochasticTractographyServer (10 files, 5677 lines)

StochasticTractographyServerMP (17 files, 7228 lines)

PythonGADScriptedModule (3 files, 326 lines)

QdecModule (11 files, 3528 lines)

Testing (1 files, 18 lines)

QueryAtlas (50 files, 13394 lines)

ImageData (62 files, 0 lines)

OntologyViz (1 files, 65 lines)

bin (5 files, 54 lines)

data (2 files, 19745 lines)

extjars (3 files, 0 lines)

cachedir (0 files, 0 lines)

packages (12 files, 0 lines)

src (8 files, 1270 lines)

tmp (69 files, 0 lines)

META-INF (1 files, 1 lines)

org (0 files, 0 lines)

python (0 files, 0 lines)

modules (9 files, 0 lines)

sre (5 files, 0 lines)

time (7 files, 0 lines)

Resources (8 files, 11846 lines)

Tcl (9 files, 7886 lines)

Testing (1 files, 0 lines)

RealTimeImaging (11 files, 3073 lines)

ScriptedModule (12 files, 1618 lines)

Testing (2 files, 150 lines)

ScriptedModuleExample (7 files, 687 lines)

SlicerDaemon (12 files, 1680 lines)

Matlab (11 files, 1277 lines)

popen (2 files, 780 lines)

Python (5 files, 261 lines)

Tcl (3 files, 805 lines)

tracker (3 files, 127 lines)

Testing (2 files, 67 lines)

Tcl (4 files, 428 lines)

matlab (0 files, 0 lines)

popen (0 files, 0 lines)

SlicerWelcome (11 files, 2326 lines)

ImageData (18 files, 0 lines)

Resources (1 files, 1201 lines)

Statistics (1 files, 7 lines)

LabelStatistics (11 files, 1405 lines)

Testing (1 files, 0 lines)

Testing (2 files, 146 lines)

Tractography (1 files, 58 lines)

Display (19 files, 3591 lines)

Resources (9 files, 101 lines)

Editor (4 files, 364 lines)

FiducialSeeding (11 files, 2164 lines)

Testing (1 files, 0 lines)

Seeding (4 files, 608 lines)

Settings (1 files, 0 lines)

Testing (4 files, 189 lines)

TestData (3 files, 10885 lines)

TumorGrowth (0 files, 0 lines)

CommandLineApplication (0 files, 0 lines)

DeformableMetric (0 files, 0 lines)

Filters (0 files, 0 lines)

Simulation (0 files, 0 lines)

Tcl (0 files, 0 lines)

Testing (0 files, 0 lines)

GUI-Results (1 files, 0 lines)

Script-Results (2 files, 0 lines)

Wizard (0 files, 0 lines)

tcl (0 files, 0 lines)

VolumeMath (0 files, 0 lines)

Testing (0 files, 0 lines)

VolumeRendering (20 files, 6424 lines)

Testing (2 files, 884 lines)

VolumeRenderingCuda (0 files, 0 lines)

VolumeRenderingReplacements (42 files, 26657 lines)

VolumeRendering1 (12 files, 2238 lines)

Testing (2 files, 884 lines)

VolumeRenderingCuda1 (23 files, 2878 lines)

VolumeRenderingReplacements1 (44 files, 26428 lines)

VolumeRenderingCuda (0 files, 0 lines)

Examples (0 files, 0 lines)

Testing (0 files, 0 lines)

Volumes (37 files, 11411 lines)

ImageData (3 files, 0 lines)

Resources (1 files, 235 lines)

Testing (6 files, 208 lines)

WFEngineModule (0 files, 0 lines)

WFEngine (0 files, 0 lines)

engine (0 files, 0 lines)

interfaces (0 files, 0 lines)

direct (0 files, 0 lines)

network (0 files, 0 lines)

xmlManager (0 files, 0 lines)

workflows (0 files, 0 lines)

Author	Changes	Lines of Code	Lines per Change
Totals	133 (100.0%)	228 (100.0%)	1.7
barre	7 (5.3%)	72 (31.6%)	10.2
pieper	20 (15.0%)	60 (26.3%)	3.0
sylvain	2 (1.5%)	44 (19.3%)	22.0
tgl	30 (22.6%)	18 (7.9%)	0.6
tokuda	13 (9.8%)	10 (4.4%)	0.7
wjp@bwh.harvard.edu	7 (5.3%)	6 (2.6%)	0.8
hliu	12 (9.0%)	4 (1.8%)	0.3
pohl	2 (1.5%)	2 (0.9%)	1.0
kquintus	2 (1.5%)	2 (0.9%)	1.0
kerstin	1 (0.8%)	2 (0.9%)	2.0
fedorov	6 (4.5%)	2 (0.9%)	0.3
alexy	5 (3.8%)	2 (0.9%)	0.4
vrnova	1 (0.8%)	1 (0.4%)	1.0
millerjv	1 (0.8%)	1 (0.4%)	1.0
lantiga	2 (1.5%)	1 (0.4%)	0.5
freudling	1 (0.8%)	1 (0.4%)	1.0
vmagnotta	2 (1.5%)	0 (0.0%)	0.0
nicky	1 (0.8%)	0 (0.0%)	0.0
naucoin	8 (6.0%)	0 (0.0%)	0.0
malaterre	1 (0.8%)	0 (0.0%)	0.0
lauren	2 (1.5%)	0 (0.0%)	0.0
jcfr	2 (1.5%)	0 (0.0%)	0.0
davisb	2 (1.5%)	0 (0.0%)	0.0
clisle	2 (1.5%)	0 (0.0%)	0.0
blezek	1 (0.8%)	0 (0.0%)	0.0

Most Recent Commits

jcfr 2009-12-08 18:34 Rev.: 11226

ENH: In CMakeLists.txt, change deprecated SUBDIRS command into ADD_SUBDIRECTORY

See http://cmake.org/cmake/help/cmake-2-8-docs.html#command:subdirs

when subdirs command was taking a list of directory, change it
using the following pattern:

Before:
subdirs(sagarmatha kumbhu eiger)

After:
SET(dirs
sagarmatha
kumbhu
eiger
)
FOREACH(dir ${dirs})
ADD_SUBDIRECTORY(${dir})
ENDFOREACH(dir)

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

jcfr 2009-12-07 23:15 Rev.: 11209

ENH: Update CMakeLists.txt - CMake 2.6 is now required

The following line have been added:

CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
IF(COMMAND CMAKE_POLICY)
CMAKE_POLICY(SET CMP0003 NEW)
ENDIF(COMMAND CMAKE_POLICY)
MARK_AS_ADVANCED(CMAKE_BACKWARDS_COMPATIBILITY)

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

tokuda 2009-12-06 17:41 Rev.: 11175

COMP: disable FourDAnalysis module.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

tokuda 2009-12-04 14:25 Rev.: 11155

BUG: Fixing memory leaks caused by FourDAnalysis module.

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

tokuda 2009-12-04 12:01 Rev.: 11154

COMP: FourDAnalysis module is disabled until memory leaks are fixed.

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

tokuda 2009-11-30 01:28 Rev.: 11081

BUG: Errors related to python on Windows have been fixed. FourDAnalysis module is added to Modules/CMakeLists.txt.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

tokuda 2009-11-28 22:25 Rev.: 11078

ENH: Removing FourDAnalysis module from CMakeLists.txt tentatively.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

tokuda 2009-11-28 20:47 Rev.: 11075

ENH: Moving XY Plotting and related classes from FourDAnalysis module to Base/GUI and Libs/MRML.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

hliu 2009-10-26 09:30 Rev.: 10749

STYLE: removed CUDA stuff from Modules.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (-1)

wjp@bwh.harvard.edu 2009-10-14 16:28 Rev.: 10651

ENH: exposing PETCTFusion module to build

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1)

vrnova 2009-10-09 11:34 Rev.: 10621

ENH: turn off volume rendering 1 as it has been merged into volume rendering module

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

alexy 2009-09-11 11:53 Rev.: 10459

ENH: Qt GAD module

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

fedorov 2009-08-10 11:07 Rev.: 10205

BUG: ChangeTracker is dependent on Volumes module, but the compiler fails
to find the header in some cases. Placing Volumes before ChangeTracker in
CMakeLists seems to fix this problem.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

hliu 2009-07-24 22:18 Rev.: 10028

ENH: added OpenCV module.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

sylvain 2009-07-20 22:41 Rev.: 9982

ENH: module to create a statistical atlas. This module complements the EMSegment module. It creates a statistical atlas using a set of pre-segmented label maps. This is a generic module not restricted to brain datasets.

42 lines of code changed in 1 file:

Modules: CMakeLists.txt (+42 -43)

fedorov 2009-07-13 16:10 Rev.: 9920

ENH: enabled FastMarching for testing

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

fedorov 2009-07-10 17:36 Rev.: 9911

BUG:(s) disabled FastMarching -- not ready for public use at the moment

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

tokuda 2009-07-02 10:50 Rev.: 9837

ENH: Activating FourDImage module.

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

sylvain 2009-06-26 23:10 Rev.: 9810

ENH: enable the compilation of the MRI Bias Field Correction module developed at the NA-MIC Week at MIT June 22-26, 2009

2 lines of code changed in 1 file:

Modules: CMakeLists.txt (+2 -1)

tokuda 2009-06-19 08:25 Rev.: 9732

ENH: Added FourDAnalysis module in CMakeLists.txt

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

fedorov 2009-06-18 17:43 Rev.: 9729

ENH: module for extracting and resampling a volume of interest from a
scalar volume -- initial commit. This is work in progress, a lot of
features are missing. This is committed in preparation for the
programming week and to collect early feedback from Ron.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

wjp@bwh.harvard.edu 2009-06-17 22:42 Rev.: 9721

ENH: adding model mirror to build, though it still has some bugs

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

tokuda 2009-06-16 17:21 Rev.: 9713

BUG: removed module names not in the repository

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

tokuda 2009-06-16 17:03 Rev.: 9712

BUG: removed modules, which do not exist in the repository, from CMakeList.txt.

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -3)

tokuda 2009-06-16 10:48 Rev.: 9705

ENH: Added FourDImage module.

5 lines of code changed in 1 file:

Modules: CMakeLists.txt (+5)

naucoin 2009-06-09 15:31 Rev.: 9668

ENH: adding Measurements module

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

fedorov 2009-05-15 16:15 Rev.: 9505

ENH: Added FastMarchingSegmentation module, derived from the original
implementation by Eric Pichon in Slicer2. Reference:

Pichon E, Tannenbaum A, Kikinis R. A statistically based flow for image
segmentation. Med Image Anal. 2004 Sep;8(3):267-74. PMID: 15450221.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

hliu 2009-05-04 11:59 Rev.: 9401

BUG: disabled IGTNavigation module for development.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

hliu 2009-05-01 15:40 Rev.: 9387

ENH: added a new module - IGTNavigation.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

hliu 2009-04-23 13:20 Rev.: 9298

ENH: re-enabled ProstateNav module.

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

pieper 2009-04-22 18:06 Rev.: 9285

ENH: re-enable expermental module for tractography exploration

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

pieper 2009-04-14 11:07 Rev.: 9191

BUG: disable ProstateNav until leak and crash issues sorted out

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

pieper 2009-04-06 12:39 Rev.: 9077

BUG: add subvolume module requested by Ron for the 3.4 release

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

wjp@bwh.harvard.edu 2009-03-27 14:12 Rev.: 8989

ENH: Added first draft of welcome module as per Ron's request

2 lines of code changed in 1 file:

Modules: CMakeLists.txt (+2)

pieper 2009-03-01 15:19 Rev.: 8797

BUG: disable distance transform model module due to bugs and disuse

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

tgl 2009-02-28 21:22 Rev.: 8785

ENH no longer used

0 lines of code changed in 2 files:

Modules: loadablemodules.cmake (del), manifest.txt (del)

wjp@bwh.harvard.edu 2009-02-04 18:07 Rev.: 8554

ENH: exposing FetchMI to build

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1 -1)

hliu 2009-02-04 14:17 Rev.: 8538

ENH: added ProstateNav module.

1 lines of code changed in 1 file:

Modules: CMakeLists.txt (+1)

naucoin 2009-01-16 18:35 Rev.: 8403

BUG: restoring ChangeTracker

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

naucoin 2009-01-16 18:34 Rev.: 8402

ENH: adding a scripted module to intersect a model with a reference volume and produce a label map volume. Documentation and testing TBD

0 lines of code changed in 1 file:

Modules: CMakeLists.txt (changed)

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