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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">I tried the cache with various values. Reducing the cache size increases the time to completion. For a size of 128.0, it finishes in about 17 seconds. For
a size of 10.0, it completes in about 20 seconds. For a size of 1.0, it took about 8 minutes and 15 seconds (timing this with my wristwatch). I decided to rerun with a size of 0.0, and it took about the same amount of time as for a cache size of 1.0 (though
is probably due to my timing method). I’d never been willing to wait over 8 minutes for it to finish before. Unfortunately, I cannot share the data set with you. However, the size of the mesh is 637492 cells with 206134 points, which I suspect is larger
than your sample files. <o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">I am running this in the Visual Studio 2008 debugger on Windows Vista. I don’t have Valgrind on my machine, but looking at their list of supported platforms,
I don’t see Windows (though apparently there is some complicated work around using another package called Wine, which I’m not going to try). We’ve also run the 0.0 sized cache on Tim’s Mac and it exhibited similar slow behavior, which we also killed after
multiple minutes, but before completion. So this is not exclusively a Windows issue.
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Pat<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> Robert Maynard [mailto:robert.maynard@kitware.com]
<br>
<b>Sent:</b> Monday, April 25, 2011 8:02 AM<br>
<b>To:</b> Crossno, Patricia J<br>
<b>Cc:</b> vtk-developers@vtk.org; paraview-developers@paraview.org<br>
<b>Subject:</b> Re: [Paraview-developers] change to vtkExodusIIReaderPrivate::ResetCache()<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Hi,<o:p></o:p></p>
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<p class="MsoNormal">The changes to the ExodusII reader was made to reduce memory overhead in ParaView. If you set the cache to any positive non zero value does the issue go away? Also would you be able to provide a sample data set that replicates this issue,
as all my ExodusII sample datasets have no issue with the cache size set to zero.<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><o:p> </o:p></p>
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<p class="MsoNormal">On Fri, Apr 22, 2011 at 4:45 PM, Crossno, Patricia J <<a href="mailto:pjcross@sandia.gov" target="_blank">pjcross@sandia.gov</a>> wrote:<o:p></o:p></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">From a pull from master some weeks ago, the previous version of this method looked like this:<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">void vtkExodusIIReaderPrivate::ResetCache()<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">{<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->Cache->Clear();<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->Cache->SetCacheCapacity( 0. ); // FIXME: Perhaps Cache should have a Reset and a Clear method?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->Cache->SetCacheCapacity( 128. ); // FIXME: Perhaps Cache should have a Reset and a Clear method?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->ClearConnectivityCaches();<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">}<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">I just did a pull and the method has been changed to this:<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">void vtkExodusIIReaderPrivate::ResetCache()<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">{<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->Cache->Clear();<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->Cache->SetCacheCapacity( 0. ); // FIXME: Perhaps Cache should have a Reset and a Clear method?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> this->ClearConnectivityCaches();<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">}<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">When reading in an exodus file now, the code disappears into the reader and never finishes (maybe it would eventually, but after a long while I kill it). Adding back in
the line to set the cache capacity to 128 resolves this issue. I expect that the line was removed for a reason. Did removing the line resolve a problem for someone else? Is anyone else having difficulty with the exodus reader as a result of this change?
Or is it something specific to my exodus file/runtime environment?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">Pat<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><br>
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<a href="http://public.kitware.com/mailman/listinfo/paraview-developers" target="_blank">http://public.kitware.com/mailman/listinfo/paraview-developers</a><o:p></o:p></p>
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<br clear="all">
<br>
-- <br>
Robert Maynard<o:p></o:p></p>
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