<div dir="ltr">Forgot to CC the list and that you were on a mac, though the same 2 instructions below apply except the install step in #1 would be different. I'll probably make #2 below to be the default behaviour on a mac, when VXL is turned on at least.<br><br><div class="gmail_extra"><div class="gmail_quote">On Thu, Sep 1, 2016 at 3:05 PM, Matt Dawkins <span dir="ltr"><<a href="mailto:matt.dawkins@kitware.com" target="_blank">matt.dawkins@kitware.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div>If you have ENABLE_VXL turned on in Linux you'll want to either:<br><br>1) Have libjpegturbo and libtiff
installed on your system (sudo apt-get libjpeg-turbo,
libtiff, plus possibly -dev packages as well) - These might be supplied by the build-dep qt5 step in <a href="https://github.com/Kitware/VIAME/blob/master/doc/install_guide.rst" target="_blank">https://github.com/Kitware/<wbr>VIAME/blob/master/doc/install_<wbr>guide.rst</a>, though if they're not I'll add them to the instructions and generalize them cross-platform a little more.<br><br></div>2) Alternatively, you can build them as part of the package if you want. This is done on windows by default right now, but not linux because they're often present on the system in one form or another. In the add_project_fletch.cmake file in CMake/add_project_fletch.cmake script you can remove line "WIN32 AND" section of line 12 and it will build them for you. I'll check if this can be set by default without significant issues.<br></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Sep 1, 2016 at 1:34 PM, Prasad, Lakshman <span dir="ltr"><<a href="mailto:prasad@lanl.gov" target="_blank">prasad@lanl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr" style="font-size:12pt;color:#000000;background-color:#ffffff;font-family:Calibri,Arial,Helvetica,sans-serif">
<p>Hi Yogi, Matt,<br>
</p>
<p><br>
</p>
<p>Thanks for the tips. The firewall and the update were both were issues. I then used make GUI to configure and generate the build. It went through fine (please see attached screenshot for the options turned. I then cd'd to VIAME-build, and did a 'make'. I
then get the following error:<br>
</p>
<p><br>
</p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>pn1246609:VIAME-build prasad$ make</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(83,48,225)">
<span style="color:#000000">[ 2%] </span>
<span><b>Performing configure step for 'fletch'</b></span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>-- Could NOT find JPEG (missing: JPEG_LIBRARY) </span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>CMake Error at CMake/Utils.cmake:115 (message):</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span> JPEG is required to build VXL.</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span> Either:</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span> - Turn on fletch_ENABLE_libjpeg-turbo.</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span> - Provide the location of an external JPEG.</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo;min-height:13px">
<span></span><br>
</p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>Call Stack (most recent call first):</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span> CMake/External_VXL.cmake:9 (add_package_dependency)</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span> CMakeLists.txt:170 (include)</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo;min-height:13px">
<span></span><br>
</p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo;min-height:13px">
<span></span><br>
</p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>-- Configuring incomplete, errors occurred!</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>See also "/Users/prasad/VIAME-build/bui<wbr>ld/src/fletch-build/CMakeFiles<wbr>/CMakeOutput.log".</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>make[2]: *** [build/src/fletch-stamp/fletch<wbr>-configure] Error 1</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>make[1]: *** [CMakeFiles/fletch.dir/all] Error 2</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>make: *** [all] Error 2</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>pn1246609:VIAME-build prasad$ </span></p>
<div><span><br>
</span></div>
<p>Thanks,<br>
</p>
<p><br>
</p>
<p>Lakshman<br>
</p>
<p><br>
</p>
<div style="color:rgb(33,33,33)">
<hr style="display:inline-block;width:98%">
<div dir="ltr"><font style="font-size:11pt" color="#000000" face="Calibri, sans-serif"><b>From:</b> Matt Dawkins <<a href="mailto:matt.dawkins@kitware.com" target="_blank">matt.dawkins@kitware.com</a>><br>
<b>Sent:</b> Wednesday, August 31, 2016 6:17 PM<br>
<b>To:</b> Yogesh Girdhar<br>
<b>Cc:</b> Prasad, Lakshman; <a href="mailto:viame@public.kitware.com" target="_blank">viame@public.kitware.com</a><br>
<b>Subject:</b> Re: [Viame] issue downloading</font>
<div> </div>
</div><div><div>
<div>
<div dir="ltr">
<div>
<div>If "git clone [any git repo] [source dir]" for all git repos is not working (not just for VIAME) you might need to check to see if you have heavy firewall settings enabled that are blocking git, or other internet connectivity issues. For just cloning a
repository using https, you should not need a github account - though it definitly doesn't hurt to have one.<br>
<br>
</div>
Once the git clone is successful, the submodule command that Yogesh pointed out is what actually initializes those folders, as they're just links to exact versions of other repositories on github.<br>
<br>
</div>
If all else fails, or your IT department is blocking git somehow (in which case I would break out the pitch forks) you can use the full source download package I'm putting together for the people on the boat.<br>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">On Wed, Aug 31, 2016 at 7:44 PM, Yogesh Girdhar <span dir="ltr">
<<a href="mailto:yogi@whoi.edu" target="_blank">yogi@whoi.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">Laxman
<div><br>
</div>
<div>after you git clone VIAME</div>
<div><br>
</div>
<div>do:</div>
<div>$ cd VIAME</div>
<div>$ git submodule update --init<br>
</div>
<div><br>
</div>
<div>that will download code for all those folders that you see as being empty.</div>
<div><br>
</div>
<div><br>
</div>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">
<div>
<div>On Wed, Aug 31, 2016 at 7:20 PM, Prasad, Lakshman <span dir="ltr">
<<a href="mailto:prasad@lanl.gov" target="_blank">prasad@lanl.gov</a>></span> wrote:<br>
</div>
</div>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div>
<div>
<div dir="ltr" style="font-size:12pt;color:#000000;background-color:#ffffff;font-family:Calibri,Arial,Helvetica,sans-serif">
<p>Hi,<br>
</p>
<p><br>
</p>
<p>I went to the link <a href="https://github.com/Kitware/VIAME" target="_blank">https://github.com/Kitwar<wbr>e/VIAME</a> and under the dropdown menu 'Clone or download' I chose Download ZIP to get a file named VIAME-master.zip (30 KB). Upon unarchiving to
VIAME-master in my home directory , I notice that folders ( kitware, fletch, scallops-tk) under packages were all empty. If I run the super-build on the command line in a terminal, I get the following error:<br>
</p>
<p><br>
</p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>pn1246609:~ prasad$ git clone <a href="https://github.com/Kitware/VIAME.git" target="_blank">
https://github.com/Kitware/VIA<wbr>ME.git</a> VIAME-source</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>Cloning into 'VIAME-source'...</span></p>
<p style="margin-right:0px;margin-left:0px;font-size:11px;line-height:normal;font-family:Menlo">
<span>fatal: unable to access '<a href="https://github.com/Kitware/VIAME.git/" target="_blank">https://github.com/Kitware/VI<wbr>AME.git/</a>': Failed to connect to
<a href="http://github.com" target="_blank">github.com</a> port 443: Connection refused</span></p>
<div><span><br>
</span></div>
<div><span>even though I created a github account.</span></div>
<div><span><br>
</span></div>
<div><span>However, if I look in the subfolders of packages on the repository, they are nonempty.</span></div>
<div><span><br>
</span></div>
<div><span>Thanks,</span></div>
<div><span>Lakshman<br>
</span></div>
<p><br>
</p>
<p><br>
</p>
<p><br>
</p>
</div>
<br>
</div>
</div>
______________________________<wbr>_________________<br>
Viame mailing list<br>
<a href="mailto:Viame@public.kitware.com" target="_blank">Viame@public.kitware.com</a><br>
<a href="http://public.kitware.com/mailman/listinfo/viame" rel="noreferrer" target="_blank">http://public.kitware.com/mail<wbr>man/listinfo/viame</a><br>
<br>
</blockquote>
</div>
<span><font color="#888888"><br>
<br clear="all">
<div><br>
</div>
-- <br>
<div>
<div dir="ltr">
<div>
<div dir="ltr">
<div>
<div dir="ltr">
<div dir="ltr">Yogesh Girdhar
<div>
<div>Assistant Scientist</div>
<div><span style="font-size:12.8px">Blake 209, MS 7</span><br>
</div>
<div>Applied Ocean Physics & Engineering</div>
<div>Woods Hole Oceanographic Institution</div>
<div>
<div style="font-size:12.6666669845581px"><a href="http://www.whoi.edu/people/ygirdhar" target="_blank">http://www.whoi.edu/people/ygi<wbr>rdhar</a></div>
</div>
<div><a href="tel:%2B1-508-289-2932" value="+15082892932" target="_blank">+1-508-289-2932</a> </div>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</font></span></div>
<br>
______________________________<wbr>_________________<br>
Viame mailing list<br>
<a href="mailto:Viame@public.kitware.com" target="_blank">Viame@public.kitware.com</a><br>
<a href="http://public.kitware.com/mailman/listinfo/viame" rel="noreferrer" target="_blank">http://public.kitware.com/mail<wbr>man/listinfo/viame</a><br>
<br>
</blockquote>
</div>
<br>
<br clear="all">
<br>
-- <br>
<div>
<div dir="ltr">
<div>
<div dir="ltr">
<div>Matthew Dawkins<br>
<a href="tel:1-518-881-4416" value="+15188814416" target="_blank">1-518-881-4416</a><br>
Senior R&D Engineer<br>
Kitware, Inc<br>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</div></div></div>
</div>
</blockquote></div><br><br clear="all"><br>-- <br><div data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div>Matthew Dawkins<br><a href="tel:1-518-881-4416" value="+15188814416" target="_blank">1-518-881-4416</a><br>Senior R&D Engineer<br>Kitware, Inc<br></div></div></div></div></div>
</div>
</div></div></blockquote></div><br><br clear="all"><br>-- <br><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div>Matthew Dawkins<br>1-518-881-4416<br>Senior R&D Engineer<br>Kitware, Inc<br></div></div></div></div></div>
</div></div>